RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 EMILIN1Q9Y6C2 1016 aa14.47□□□□□ -0.09
HMGXB3-205ENST00000514469 USHBP1Q8N6Y0 703 aa14.46□□□□□ -0.09
HMGXB3-205ENST00000514469 POLR3GLQ9BT43 218 aa14.46□□□□□ -0.09
HMGXB3-205ENST00000514469 ZCRB1Q8TBF4 217 aaKnown RBP14.45□□□□□ -0.1
HMGXB3-205ENST00000514469 DDX54Q8TDD1 881 aaKnown RBP14.45□□□□□ -0.1
HMGXB3-205ENST00000514469 NSD2O96028 1365 aa14.45□□□□□ -0.1
HMGXB3-205ENST00000514469 PKD1L3Q7Z443 1732 aa14.44□□□□□ -0.1
HMGXB3-205ENST00000514469 WASHC2AQ641Q2 1341 aa14.43□□□□□ -0.1
HMGXB3-205ENST00000514469 RAPGEF4Q8WZA2 1011 aa14.43□□□□□ -0.1
HMGXB3-205ENST00000514469 TATP17735 454 aaPredicted RBP14.42□□□□□ -0.1
HMGXB3-205ENST00000514469 PANK3Q9H999 370 aa14.42□□□□□ -0.1
HMGXB3-205ENST00000514469 STK32BQ9NY57 414 aa14.42□□□□□ -0.1
HMGXB3-205ENST00000514469 SLC15A2Q16348 729 aa14.41□□□□□ -0.1
HMGXB3-205ENST00000514469 POLKQ9UBT6 870 aa14.41□□□□□ -0.1
HMGXB3-205ENST00000514469 LY75O60449 1722 aa14.41□□□□□ -0.1
HMGXB3-205ENST00000514469 PCDH11XQ9BZA7 1347 aa14.41□□□□□ -0.1
HMGXB3-205ENST00000514469 PCDH11YQ9BZA8 1340 aa14.41□□□□□ -0.1
HMGXB3-205ENST00000514469 PPM1GO15355 546 aaPredicted RBP14.4□□□□□ -0.1
HMGXB3-205ENST00000514469 SPON1Q9HCB6 807 aa14.4□□□□□ -0.1
HMGXB3-205ENST00000514469 MAP2P11137 1827 aaKnown RBP14.4□□□□□ -0.1
HMGXB3-205ENST00000514469 TOGARAM1Q9Y4F4 1720 aa14.4□□□□□ -0.1
HMGXB3-205ENST00000514469 PRIM1P49642 420 aaKnown RBP14.39□□□□□ -0.11
HMGXB3-205ENST00000514469 PDGFDQ9GZP0 370 aaPredicted RBP14.39□□□□□ -0.11
HMGXB3-205ENST00000514469 LRRC4BQ9NT99 713 aa14.39□□□□□ -0.11
HMGXB3-205ENST00000514469 KIF7Q2M1P5 1343 aa14.39□□□□□ -0.11
HMGXB3-205ENST00000514469 PLEKHG2Q9H7P9 1386 aa14.38□□□□□ -0.11
HMGXB3-205ENST00000514469 SYTL4Q96C24 671 aaPredicted RBP14.38□□□□□ -0.11
HMGXB3-205ENST00000514469 QSER1Q2KHR3 1735 aa14.38□□□□□ -0.11
HMGXB3-205ENST00000514469 TNNT2P45379 298 aaPredicted RBP14.37□□□□□ -0.11
HMGXB3-205ENST00000514469 ZNF827Q17R98 1081 aa14.37□□□□□ -0.11
HMGXB3-205ENST00000514469 SLC27A3Q5K4L6 730 aa14.37□□□□□ -0.11
HMGXB3-205ENST00000514469 EYA1Q99502 592 aa14.37□□□□□ -0.11
HMGXB3-205ENST00000514469 CYP27B1O15528 508 aa14.36□□□□□ -0.11
HMGXB3-205ENST00000514469 EIF4A2Q14240 407 aaKnown RBP14.36□□□□□ -0.11
HMGXB3-205ENST00000514469 ZBTB7AO95365 584 aa14.35□□□□□ -0.11
HMGXB3-205ENST00000514469 AKT1S1Q96B36 256 aa14.35□□□□□ -0.11
HMGXB3-205ENST00000514469 IGSF1Q8N6C5 1336 aa14.35□□□□□ -0.11
HMGXB3-205ENST00000514469 PTGER2P43116 358 aa14.34□□□□□ -0.11
HMGXB3-205ENST00000514469 KNSTRNQ9Y448 316 aa14.34□□□□□ -0.11
HMGXB3-205ENST00000514469 TUBGCP6Q96RT7 1819 aa14.34□□□□□ -0.11
HMGXB3-205ENST00000514469 NKX1-1Q15270 411 aaPredicted RBP14.33□□□□□ -0.12
HMGXB3-205ENST00000514469 AMER1Q5JTC6 1135 aaPredicted RBP14.33□□□□□ -0.12
HMGXB3-205ENST00000514469 MORC1Q86VD1 984 aa14.33□□□□□ -0.12
HMGXB3-205ENST00000514469 MTFR1LQ9H019 292 aa14.33□□□□□ -0.12
HMGXB3-205ENST00000514469 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.33□□□□□ -0.127e-9■■□□□ 12.6
HMGXB3-205ENST00000514469 PPP1R1BQ9UD71 204 aaPredicted RBP14.33□□□□□ -0.12
HMGXB3-205ENST00000514469 SPG7Q9UQ90 795 aa14.33□□□□□ -0.12
HMGXB3-205ENST00000514469 C5P01031 1676 aa14.33□□□□□ -0.12
HMGXB3-205ENST00000514469 KCNQ4P56696 695 aa14.31□□□□□ -0.12
HMGXB3-205ENST00000514469 SGIP1Q9BQI5 828 aa14.31□□□□□ -0.12
HMGXB3-205ENST00000514469 CCNL1Q9UK58 526 aaPredicted RBP14.31□□□□□ -0.12
HMGXB3-205ENST00000514469 COL24A1Q17RW2 1714 aa14.31□□□□□ -0.12
HMGXB3-205ENST00000514469 ITGB4P16144 1822 aa14.31□□□□□ -0.12
HMGXB3-205ENST00000514469 PALLDQ8WX93 1383 aa14.31□□□□□ -0.12
HMGXB3-205ENST00000514469 ATF5Q9Y2D1 282 aaPredicted RBP14.3□□□□□ -0.12
HMGXB3-205ENST00000514469 PNPLA7Q6ZV29 1317 aa14.3□□□□□ -0.12
HMGXB3-205ENST00000514469 PHKG2P15735 406 aa14.29□□□□□ -0.12
HMGXB3-205ENST00000514469 PER1O15534 1290 aaPredicted RBP14.28□□□□□ -0.12
HMGXB3-205ENST00000514469 KDRP35968 1356 aa14.28□□□□□ -0.12
HMGXB3-205ENST00000514469 MPRIPQ6WCQ1 1025 aa14.28□□□□□ -0.12
HMGXB3-205ENST00000514469 IFNL2Q8IZJ0 200 aa14.28□□□□□ -0.12
HMGXB3-205ENST00000514469 TAF1LQ8IZX4 1826 aa14.27□□□□□ -0.12
HMGXB3-205ENST00000514469 SLC16A10Q8TF71 515 aa14.27□□□□□ -0.13
HMGXB3-205ENST00000514469 PIGBQ92521 554 aa14.27□□□□□ -0.13
HMGXB3-205ENST00000514469 TFCP2L1Q9NZI6 479 aa14.27□□□□□ -0.13
HMGXB3-205ENST00000514469 C4BP0C0L5 1744 aa14.27□□□□□ -0.13
HMGXB3-205ENST00000514469 MAP3K5Q99683 1374 aa14.26□□□□□ -0.13
HMGXB3-205ENST00000514469 NPC1L1Q9UHC9 1359 aa14.26□□□□□ -0.13
HMGXB3-205ENST00000514469 SMARCC1Q92922 1105 aaPredicted RBP14.26□□□□□ -0.13
HMGXB3-205ENST00000514469 KAT6BQ8WYB5 2073 aa14.26□□□□□ -0.13
HMGXB3-205ENST00000514469 IL13P35225 146 aa14.25□□□□□ -0.13
HMGXB3-205ENST00000514469 AEBP1Q8IUX7 1158 aa14.25□□□□□ -0.13
HMGXB3-205ENST00000514469 KDM6AO15550 1401 aaPredicted RBP14.24□□□□□ -0.13
HMGXB3-205ENST00000514469 HMGB2P26583 209 aaKnown RBP14.24□□□□□ -0.13
HMGXB3-205ENST00000514469 FHDC1Q9C0D6 1143 aaPredicted RBP14.24□□□□□ -0.13
HMGXB3-205ENST00000514469 TMOD3Q9NYL9 352 aa14.24□□□□□ -0.13
HMGXB3-205ENST00000514469 AMOTQ4VCS5 1084 aa14.23□□□□□ -0.13
HMGXB3-205ENST00000514469 PLEKHO1Q53GL0 409 aaPredicted RBP14.23□□□□□ -0.13
HMGXB3-205ENST00000514469 ARXQ96QS3 562 aa14.23□□□□□ -0.13
HMGXB3-205ENST00000514469 COL3A1P02461 1466 aaPredicted RBP14.23□□□□□ -0.13
HMGXB3-205ENST00000514469 ZNF831Q5JPB2 1677 aa14.23□□□□□ -0.13
HMGXB3-205ENST00000514469 HSP90AB1P08238 724 aaKnown RBP14.22□□□□□ -0.13
HMGXB3-205ENST00000514469 CC2D1BQ5T0F9 858 aaKnown RBP14.22□□□□□ -0.13
HMGXB3-205ENST00000514469 SULT6B1Q6IMI4 303 aa14.22□□□□□ -0.13
HMGXB3-205ENST00000514469 ZNF530Q6P9A1 599 aaPredicted RBP14.22□□□□□ -0.13
HMGXB3-205ENST00000514469 DCAF5Q96JK2 942 aa14.22□□□□□ -0.13
HMGXB3-205ENST00000514469 SYT17Q9BSW7 474 aa14.22□□□□□ -0.13
HMGXB3-205ENST00000514469 LOC102724428A0A0B4J2F2 783 aa14.21□□□□□ -0.13
HMGXB3-205ENST00000514469 ERVV-2B6SEH9 535 aa14.21□□□□□ -0.13
HMGXB3-205ENST00000514469 MTHFSP49914 203 aa14.21□□□□□ -0.13
HMGXB3-205ENST00000514469 SIK1P57059 783 aa14.21□□□□□ -0.13
HMGXB3-205ENST00000514469 COL23A1Q86Y22 540 aaPredicted RBP14.21□□□□□ -0.13
HMGXB3-205ENST00000514469 ASAP1Q9ULH1 1129 aa14.21□□□□□ -0.13
HMGXB3-205ENST00000514469 UBR3Q6ZT12 1888 aa14.21□□□□□ -0.14
HMGXB3-205ENST00000514469 POLD1P28340 1107 aa14.2□□□□□ -0.14
HMGXB3-205ENST00000514469 LINC00116Q8NCU8 138 aa14.19□□□□□ -0.14
HMGXB3-205ENST00000514469 FLAD1Q8NFF5 587 aa14.19□□□□□ -0.14
HMGXB3-205ENST00000514469 AK7Q96M32 723 aa14.19□□□□□ -0.14
HMGXB3-205ENST00000514469 ATG3Q9NT62 314 aa14.19□□□□□ -0.14
HMGXB3-205ENST00000514469 CICQ96RK0 1608 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms