RNA–Protein interactions for RNA: ENST00000514387.6

GPBP1-208, Transcript of GC-rich promoter binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPBP1, Length 3,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPBP1-208ENST00000514387 SBNO2Q9Y2G9 1366 aa10.64□□□□□ -0.71
GPBP1-208ENST00000514387 KIF1CO43896 1103 aaKnown RBP10.64□□□□□ -0.71
GPBP1-208ENST00000514387 TCP11L2Q8N4U5 519 aa10.64□□□□□ -0.71
GPBP1-208ENST00000514387 RNF217Q8TC41 542 aa10.64□□□□□ -0.71
GPBP1-208ENST00000514387 USP25Q9UHP3 1055 aa10.64□□□□□ -0.71
GPBP1-208ENST00000514387 MORC2Q9Y6X9 1032 aaPredicted RBP10.64□□□□□ -0.71
GPBP1-208ENST00000514387 MTA1Q13330 715 aa10.64□□□□□ -0.71
GPBP1-208ENST00000514387 TBC1D9Q6ZT07 1266 aa10.64□□□□□ -0.71
GPBP1-208ENST00000514387 TMTC2Q8N394 836 aa10.64□□□□□ -0.71
GPBP1-208ENST00000514387 MED14O60244 1454 aa10.64□□□□□ -0.71
GPBP1-208ENST00000514387 CD2BP2O95400 341 aaKnown RBP10.63□□□□□ -0.71
GPBP1-208ENST00000514387 ALDH1L2Q3SY69 923 aa10.63□□□□□ -0.71
GPBP1-208ENST00000514387 CTR9Q6PD62 1173 aa10.63□□□□□ -0.71
GPBP1-208ENST00000514387 BRMS1Q9HCU9 246 aa10.63□□□□□ -0.71
GPBP1-208ENST00000514387 NOS1P29475 1434 aa10.63□□□□□ -0.71
GPBP1-208ENST00000514387 GOLGA6L6A8MZA4 724 aa10.63□□□□□ -0.71
GPBP1-208ENST00000514387 CFAP53Q96M91 514 aa10.63□□□□□ -0.71
GPBP1-208ENST00000514387 SYCE3A1L190 88 aa10.63□□□□□ -0.71
GPBP1-208ENST00000514387 NOP2P46087 812 aaKnown RBP10.63□□□□□ -0.71
GPBP1-208ENST00000514387 ITFG2Q969R8 447 aa10.63□□□□□ -0.71
GPBP1-208ENST00000514387 DONSONQ9NYP3 566 aa10.63□□□□□ -0.71
GPBP1-208ENST00000514387 PDS5BQ9NTI5 1447 aa10.62□□□□□ -0.71
GPBP1-208ENST00000514387 LOC102724159A0A0B4J2E5 919 aa10.62□□□□□ -0.71
GPBP1-208ENST00000514387 PWP2Q15269 919 aaKnown RBP10.62□□□□□ -0.71
GPBP1-208ENST00000514387 DDX41Q9UJV9 622 aaKnown RBP10.62□□□□□ -0.71
GPBP1-208ENST00000514387 HSP90AB4PQ58FF6 505 aa10.62□□□□□ -0.71
GPBP1-208ENST00000514387 MYO3AQ8NEV4 1616 aa10.61□□□□□ -0.71
GPBP1-208ENST00000514387 SLFN14P0C7P3 912 aa10.61□□□□□ -0.71
GPBP1-208ENST00000514387 TRIM27P14373 513 aa10.61□□□□□ -0.71
GPBP1-208ENST00000514387 SMC4Q9NTJ3 1288 aa10.61□□□□□ -0.71
GPBP1-208ENST00000514387 C11orf91Q3C1V1 193 aa10.61□□□□□ -0.71
GPBP1-208ENST00000514387 ITPRIPQ8IWB1 547 aa10.61□□□□□ -0.71
GPBP1-208ENST00000514387 KIAA1524Q8TCG1 905 aa10.61□□□□□ -0.71
GPBP1-208ENST00000514387 ZNF777Q9ULD5 760 aaPredicted RBP10.61□□□□□ -0.71
GPBP1-208ENST00000514387 TNNQ9UQP3 1299 aa10.61□□□□□ -0.71
GPBP1-208ENST00000514387 ZNF518AQ6AHZ1 1483 aa10.61□□□□□ -0.71
GPBP1-208ENST00000514387 ERCC6Q03468 1493 aa10.61□□□□□ -0.71
GPBP1-208ENST00000514387 CTNNA3Q9UI47 895 aa10.61□□□□□ -0.71
GPBP1-208ENST00000514387 KIF24Q5T7B8 1368 aa10.6□□□□□ -0.71
GPBP1-208ENST00000514387 PIK3R4Q99570 1358 aa10.6□□□□□ -0.71
GPBP1-208ENST00000514387 GOLIM4O00461 696 aa10.6□□□□□ -0.71
GPBP1-208ENST00000514387 SSR1P43307 286 aaKnown RBP10.6□□□□□ -0.71
GPBP1-208ENST00000514387 RGL3Q3MIN7 710 aa10.6□□□□□ -0.71
GPBP1-208ENST00000514387 MAGI1Q96QZ7 1491 aaPredicted RBP10.6□□□□□ -0.71
GPBP1-208ENST00000514387 SMTNL1A8MU46 457 aa10.6□□□□□ -0.71
GPBP1-208ENST00000514387 SGSM3Q96HU1 749 aa10.6□□□□□ -0.71
GPBP1-208ENST00000514387 INTS4Q96HW7 963 aaKnown RBP10.6□□□□□ -0.71
GPBP1-208ENST00000514387 PAXBP1Q9Y5B6 917 aa10.6□□□□□ -0.71
GPBP1-208ENST00000514387 NSD2O96028 1365 aa10.6□□□□□ -0.71
GPBP1-208ENST00000514387 PPRC1Q5VV67 1664 aaKnown RBP10.6□□□□□ -0.71
GPBP1-208ENST00000514387 TMEM87AQ8NBN3 555 aa10.6□□□□□ -0.71
GPBP1-208ENST00000514387 ARHGAP45Q92619 1136 aa10.6□□□□□ -0.71
GPBP1-208ENST00000514387 RBM27Q9P2N5 1060 aaKnown RBP10.6□□□□□ -0.71
GPBP1-208ENST00000514387 SWT1Q5T5J6 900 aaKnown RBP10.59□□□□□ -0.71
GPBP1-208ENST00000514387 INTS3Q68E01 1043 aaKnown RBP10.59□□□□□ -0.71
GPBP1-208ENST00000514387 FAM210AQ96ND0 272 aa10.59□□□□□ -0.71
GPBP1-208ENST00000514387 FOXD4L1Q9NU39 408 aa10.59□□□□□ -0.71
GPBP1-208ENST00000514387 RIOK3O14730 519 aaKnown RBP10.59□□□□□ -0.71
GPBP1-208ENST00000514387 BRD1O95696 1058 aa10.59□□□□□ -0.71
GPBP1-208ENST00000514387 TERF2Q15554 542 aa10.59□□□□□ -0.71
GPBP1-208ENST00000514387 KRT222Q8N1A0 295 aa10.59□□□□□ -0.71
GPBP1-208ENST00000514387 USP26Q9BXU7 913 aa10.59□□□□□ -0.71
GPBP1-208ENST00000514387 ERVK-7P63135 1459 aa10.58□□□□□ -0.72
GPBP1-208ENST00000514387 CCDC189A1A4V9 331 aa10.58□□□□□ -0.72
GPBP1-208ENST00000514387 KCNJ4P48050 445 aa10.58□□□□□ -0.72
GPBP1-208ENST00000514387 RNF20Q5VTR2 975 aa10.58□□□□□ -0.72
GPBP1-208ENST00000514387 CHMP4CQ96CF2 233 aa10.58□□□□□ -0.72
GPBP1-208ENST00000514387 LNPKQ9C0E8 428 aa10.58□□□□□ -0.72
GPBP1-208ENST00000514387 MED4Q9NPJ6 270 aa10.58□□□□□ -0.72
GPBP1-208ENST00000514387 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.58□□□□□ -0.728e-7■■■■■ 115.7
GPBP1-208ENST00000514387 FAM53CQ9NYF3 392 aa10.58□□□□□ -0.72
GPBP1-208ENST00000514387 ZDHHC9Q9Y397 364 aa10.58□□□□□ -0.72
GPBP1-208ENST00000514387 U2AF2P26368 475 aaKnown RBP eCLIP10.58□□□□□ -0.723e-7■■□□□ 11.5
GPBP1-208ENST00000514387 CCDC183Q5T5S1 534 aa10.58□□□□□ -0.72
GPBP1-208ENST00000514387 TRAPPC8Q9Y2L5 1435 aa10.58□□□□□ -0.72
GPBP1-208ENST00000514387 TRPM2O94759 1503 aa10.57□□□□□ -0.72
GPBP1-208ENST00000514387 KLHL33A6NCF5 533 aa10.57□□□□□ -0.72
GPBP1-208ENST00000514387 KDM4AO75164 1064 aa10.57□□□□□ -0.72
GPBP1-208ENST00000514387 SLFNL1Q499Z3 407 aa10.57□□□□□ -0.72
GPBP1-208ENST00000514387 TSPAN18Q96SJ8 248 aa10.57□□□□□ -0.72
GPBP1-208ENST00000514387 ABCA8O94911 1581 aa10.57□□□□□ -0.72
GPBP1-208ENST00000514387 SPDYE4A6NLX3 237 aa10.57□□□□□ -0.72
GPBP1-208ENST00000514387 REC8O95072 547 aa10.57□□□□□ -0.72
GPBP1-208ENST00000514387 ADCY5O95622 1261 aa10.57□□□□□ -0.72
GPBP1-208ENST00000514387 RINLQ6ZS11 566 aa10.57□□□□□ -0.72
GPBP1-208ENST00000514387 AEBP1Q8IUX7 1158 aa10.57□□□□□ -0.72
GPBP1-208ENST00000514387 CUL4AQ13619 759 aa10.56□□□□□ -0.72
GPBP1-208ENST00000514387 TMEM57Q8N5G2 664 aa10.56□□□□□ -0.72
GPBP1-208ENST00000514387 RBM42Q9BTD8 480 aaKnown RBP10.56□□□□□ -0.72
GPBP1-208ENST00000514387 PREX2Q70Z35 1606 aa10.56□□□□□ -0.72
GPBP1-208ENST00000514387 ARID4AP29374 1257 aaPredicted RBP10.56□□□□□ -0.72
GPBP1-208ENST00000514387 NRDCO43847 1150 aa10.56□□□□□ -0.72
GPBP1-208ENST00000514387 NCBP1Q09161 790 aaKnown RBP10.56□□□□□ -0.72
GPBP1-208ENST00000514387 SSH1Q8WYL5 1049 aa10.56□□□□□ -0.72
GPBP1-208ENST00000514387 PPIP5K1Q6PFW1 1433 aa10.55□□□□□ -0.72
GPBP1-208ENST00000514387 KIF3CO14782 793 aa10.55□□□□□ -0.72
GPBP1-208ENST00000514387 ANKRD45Q5TZF3 282 aa10.55□□□□□ -0.72
GPBP1-208ENST00000514387 MORC1Q86VD1 984 aa10.55□□□□□ -0.72
GPBP1-208ENST00000514387 ZNF397Q8NF99 534 aaPredicted RBP10.55□□□□□ -0.72
GPBP1-208ENST00000514387 IL17RAQ96F46 866 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms