RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 SIAH2O43255 324 aa7.78□□□□□ -1.16
NIPBL-207ENST00000513819 GRM5P41594 1212 aa7.78□□□□□ -1.16
NIPBL-207ENST00000513819 CCDC102BQ68D86 513 aa7.78□□□□□ -1.16
NIPBL-207ENST00000513819 CCDC125Q86Z20 511 aa7.78□□□□□ -1.16
NIPBL-207ENST00000513819 SIX5Q8N196 739 aa7.78□□□□□ -1.16
NIPBL-207ENST00000513819 TPCN2Q8NHX9 752 aa7.78□□□□□ -1.16
NIPBL-207ENST00000513819 SIRT1Q96EB6 747 aa7.78□□□□□ -1.16
NIPBL-207ENST00000513819 TMPRSS4Q9NRS4 437 aa7.78□□□□□ -1.16
NIPBL-207ENST00000513819 SFI1A8K8P3 1242 aa7.77□□□□□ -1.17
NIPBL-207ENST00000513819 IFFO2Q5TF58 517 aa7.77□□□□□ -1.17
NIPBL-207ENST00000513819 MRGPRX2Q96LB1 330 aa7.77□□□□□ -1.17
NIPBL-207ENST00000513819 WNT7AO00755 349 aa7.76□□□□□ -1.17
NIPBL-207ENST00000513819 MYCP01106 439 aaPredicted RBP7.76□□□□□ -1.17
NIPBL-207ENST00000513819 SPRYD7Q5W111 196 aa7.76□□□□□ -1.17
NIPBL-207ENST00000513819 CYLDQ9NQC7 956 aa7.76□□□□□ -1.17
NIPBL-207ENST00000513819 RBM19Q9Y4C8 960 aaKnown RBP7.76□□□□□ -1.17
NIPBL-207ENST00000513819 IVNS1ABPQ9Y6Y0 642 aa7.76□□□□□ -1.17
NIPBL-207ENST00000513819 PATL2C9JE40 543 aaKnown RBP7.75□□□□□ -1.17
NIPBL-207ENST00000513819 LGR5O75473 907 aa7.75□□□□□ -1.17
NIPBL-207ENST00000513819 ADH1CP00326 375 aa7.75□□□□□ -1.17
NIPBL-207ENST00000513819 SEC13P55735 322 aa7.75□□□□□ -1.17
NIPBL-207ENST00000513819 ERVK-9P63128 1117 aa7.75□□□□□ -1.17
NIPBL-207ENST00000513819 PHLDB3Q6NSJ2 640 aa7.75□□□□□ -1.17
NIPBL-207ENST00000513819 MPNDQ8N594 471 aa7.75□□□□□ -1.17
NIPBL-207ENST00000513819 CLP1Q92989 425 aaKnown RBP7.75□□□□□ -1.17
NIPBL-207ENST00000513819 DHX9Q08211 1270 aaKnown RBP7.74□□□□□ -1.17
NIPBL-207ENST00000513819 ZNF697Q5TEC3 545 aa7.74□□□□□ -1.17
NIPBL-207ENST00000513819 CC2D2BQ6DHV5 1058 aa7.74□□□□□ -1.17
NIPBL-207ENST00000513819 B4GALNT3Q6L9W6 998 aa7.74□□□□□ -1.17
NIPBL-207ENST00000513819 CCDC116Q8IYX3 515 aa7.74□□□□□ -1.17
NIPBL-207ENST00000513819 ZNF784Q8NCA9 323 aaPredicted RBP7.74□□□□□ -1.17
NIPBL-207ENST00000513819 ESF1Q9H501 851 aaKnown RBP7.74□□□□□ -1.17
NIPBL-207ENST00000513819 STAU1O95793 577 aaKnown RBP7.73□□□□□ -1.17
NIPBL-207ENST00000513819 NR3C2P08235 984 aa7.73□□□□□ -1.17
NIPBL-207ENST00000513819 ATP2B4P23634 1241 aa7.73□□□□□ -1.17
NIPBL-207ENST00000513819 SSFA2P28290 1259 aa7.73□□□□□ -1.17
NIPBL-207ENST00000513819 FOXC1Q12948 553 aa7.73□□□□□ -1.17
NIPBL-207ENST00000513819 SWI5Q1ZZU3 235 aa7.73□□□□□ -1.17
NIPBL-207ENST00000513819 PPP1R26Q5T8A7 1209 aaPredicted RBP7.73□□□□□ -1.17
NIPBL-207ENST00000513819 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.73□□□□□ -1.17
NIPBL-207ENST00000513819 OSBPL3Q9H4L5 887 aa7.73□□□□□ -1.17
NIPBL-207ENST00000513819 CCDC9Q9Y3X0 531 aaKnown RBP7.73□□□□□ -1.17
NIPBL-207ENST00000513819 A0A0G2JS52 829 aa7.72□□□□□ -1.17
NIPBL-207ENST00000513819 PRMT3O60678 531 aa7.72□□□□□ -1.17
NIPBL-207ENST00000513819 SCNN1AP37088 669 aa7.72□□□□□ -1.17
NIPBL-207ENST00000513819 NR5A1Q13285 461 aa7.72□□□□□ -1.17
NIPBL-207ENST00000513819 TSEN2Q8NCE0 465 aaKnown RBP7.72□□□□□ -1.17
NIPBL-207ENST00000513819 PRIMPOLQ96LW4 560 aa7.72□□□□□ -1.17
NIPBL-207ENST00000513819 LILRA1O75019 489 aa7.71□□□□□ -1.18
NIPBL-207ENST00000513819 ALDH1A1P00352 501 aa7.71□□□□□ -1.18
NIPBL-207ENST00000513819 TMCO4Q5TGY1 634 aa7.71□□□□□ -1.18
NIPBL-207ENST00000513819 ZNF598Q86UK7 904 aaKnown RBP7.71□□□□□ -1.18
NIPBL-207ENST00000513819 HINFPQ9BQA5 517 aa7.71□□□□□ -1.18
NIPBL-207ENST00000513819 PRKD2Q9BZL6 878 aa7.71□□□□□ -1.18
NIPBL-207ENST00000513819 ZNF358Q9NW07 568 aa7.71□□□□□ -1.18
NIPBL-207ENST00000513819 TMEM229AB2RXF0 380 aa7.7□□□□□ -1.18
NIPBL-207ENST00000513819 ADD1P35611 737 aaKnown RBP7.7□□□□□ -1.18
NIPBL-207ENST00000513819 MYT1Q01538 1121 aa7.7□□□□□ -1.18
NIPBL-207ENST00000513819 PKD2L1Q9P0L9 805 aa7.7□□□□□ -1.18
NIPBL-207ENST00000513819 SCNN1DP51172 638 aa7.69□□□□□ -1.18
NIPBL-207ENST00000513819 NNTQ13423 1086 aa7.69□□□□□ -1.18
NIPBL-207ENST00000513819 OCLNQ16625 522 aa7.69□□□□□ -1.18
NIPBL-207ENST00000513819 TXNDC2Q86VQ3 553 aa7.69□□□□□ -1.18
NIPBL-207ENST00000513819 GAS2L2Q8NHY3 880 aa7.69□□□□□ -1.18
NIPBL-207ENST00000513819 GNEQ9Y223 722 aaKnown RBP7.69□□□□□ -1.18
NIPBL-207ENST00000513819 GDF10P55107 478 aa7.68□□□□□ -1.18
NIPBL-207ENST00000513819 CCER1Q8TC90 406 aaPredicted RBP7.68□□□□□ -1.18
NIPBL-207ENST00000513819 ETNK1Q9HBU6 452 aa7.68□□□□□ -1.18
NIPBL-207ENST00000513819 PGPEP1Q9NXJ5 209 aa7.68□□□□□ -1.18
NIPBL-207ENST00000513819 CXXC1Q9P0U4 656 aaPredicted RBP7.68□□□□□ -1.18
NIPBL-207ENST00000513819 SERTAD1Q9UHV2 236 aa7.68□□□□□ -1.18
NIPBL-207ENST00000513819 EMILIN1Q9Y6C2 1016 aa7.68□□□□□ -1.18
NIPBL-207ENST00000513819 WASF2Q9Y6W5 498 aa7.68□□□□□ -1.18
NIPBL-207ENST00000513819 ARID4AP29374 1257 aaPredicted RBP7.67□□□□□ -1.18
NIPBL-207ENST00000513819 MFAP1P55081 439 aaKnown RBP7.67□□□□□ -1.18
NIPBL-207ENST00000513819 CYP2U1Q7Z449 544 aa7.67□□□□□ -1.18
NIPBL-207ENST00000513819 J3QL48 77 aa7.66□□□□□ -1.18
NIPBL-207ENST00000513819 M0R2N6 131 aa7.66□□□□□ -1.18
NIPBL-207ENST00000513819 TNFRSF10AO00220 468 aa7.66□□□□□ -1.18
NIPBL-207ENST00000513819 SERPINB4P48594 390 aa7.66□□□□□ -1.18
NIPBL-207ENST00000513819 TNS4Q8IZW8 715 aa7.66□□□□□ -1.18
NIPBL-207ENST00000513819 SNIP1Q8TAD8 396 aaKnown RBP7.66□□□□□ -1.18
NIPBL-207ENST00000513819 TRIM52Q96A61 297 aa7.66□□□□□ -1.18
NIPBL-207ENST00000513819 RAB6BQ9NRW1 208 aa7.66□□□□□ -1.18
NIPBL-207ENST00000513819 V9GY48 417 aaPredicted RBP7.66□□□□□ -1.18
NIPBL-207ENST00000513819 GDF9O60383 454 aa7.65□□□□□ -1.18
NIPBL-207ENST00000513819 INHAP05111 366 aa7.65□□□□□ -1.18
NIPBL-207ENST00000513819 CBLBQ13191 982 aa7.65□□□□□ -1.18
NIPBL-207ENST00000513819 SND1Q7KZF4 910 aaKnown RBP eCLIP7.65□□□□□ -1.18
NIPBL-207ENST00000513819 PURBQ96QR8 312 aaKnown RBP7.65□□□□□ -1.18
NIPBL-207ENST00000513819 MKNK1Q9BUB5 465 aa7.65□□□□□ -1.18
NIPBL-207ENST00000513819 ARHGEF10LQ9HCE6 1279 aa7.65□□□□□ -1.18
NIPBL-207ENST00000513819 TTC24A2A3L6 582 aaPredicted RBP7.64□□□□□ -1.19
NIPBL-207ENST00000513819 WASLO00401 505 aaPredicted RBP7.64□□□□□ -1.19
NIPBL-207ENST00000513819 BACH1O14867 736 aa7.64□□□□□ -1.19
NIPBL-207ENST00000513819 GNRH1P01148 92 aa7.64□□□□□ -1.19
NIPBL-207ENST00000513819 WEE1P30291 646 aa7.64□□□□□ -1.19
NIPBL-207ENST00000513819 TAS1R3Q7RTX0 852 aa7.64□□□□□ -1.19
NIPBL-207ENST00000513819 C1orf216Q8TAB5 229 aa7.64□□□□□ -1.19
NIPBL-207ENST00000513819 ITPKCQ96DU7 683 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms