RNA–Protein interactions for RNA: ENST00000513367.1

SRPK1-213, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-213ENST00000513367 CCDC18Q5T9S5 1454 aa10.17□□□□□ -0.78
SRPK1-213ENST00000513367 RBM46Q8TBY0 533 aaKnown RBP10.16□□□□□ -0.78
SRPK1-213ENST00000513367 ATP13A2Q9NQ11 1180 aa10.16□□□□□ -0.78
SRPK1-213ENST00000513367 FCF1Q9Y324 198 aaKnown RBP10.16□□□□□ -0.78
SRPK1-213ENST00000513367 RTEL1-TNFRSF6BF6WH68 1400 aa10.16□□□□□ -0.78
SRPK1-213ENST00000513367 UBTFP17480 764 aaKnown RBP10.15□□□□□ -0.78
SRPK1-213ENST00000513367 C8orf37Q96NL8 207 aa10.14□□□□□ -0.79
SRPK1-213ENST00000513367 AHDC1Q5TGY3 1603 aaPredicted RBP10.14□□□□□ -0.79
SRPK1-213ENST00000513367 CCNB3Q8WWL7 1395 aa10.14□□□□□ -0.79
SRPK1-213ENST00000513367 KDM5AP29375 1690 aaKnown RBP10.13□□□□□ -0.79
SRPK1-213ENST00000513367 MBD5Q9P267 1494 aa10.13□□□□□ -0.79
SRPK1-213ENST00000513367 CD2BP2O95400 341 aaKnown RBP10.13□□□□□ -0.79
SRPK1-213ENST00000513367 ABCC3O15438 1527 aa10.12□□□□□ -0.79
SRPK1-213ENST00000513367 NKTRP30414 1462 aaKnown RBP10.12□□□□□ -0.79
SRPK1-213ENST00000513367 LRP5O75197 1615 aa10.12□□□□□ -0.79
SRPK1-213ENST00000513367 TTC24A2A3L6 582 aaPredicted RBP10.12□□□□□ -0.79
SRPK1-213ENST00000513367 SMPD1P17405 629 aa10.12□□□□□ -0.79
SRPK1-213ENST00000513367 PTGDRQ13258 359 aa10.12□□□□□ -0.79
SRPK1-213ENST00000513367 NGLY1Q96IV0 654 aa10.12□□□□□ -0.79
SRPK1-213ENST00000513367 TRIM47Q96LD4 638 aa10.12□□□□□ -0.79
SRPK1-213ENST00000513367 EEA1Q15075 1411 aa10.12□□□□□ -0.79
SRPK1-213ENST00000513367 CASKIN1Q8WXD9 1431 aa10.12□□□□□ -0.79
SRPK1-213ENST00000513367 DIP2AQ14689 1571 aa10.12□□□□□ -0.79
SRPK1-213ENST00000513367 EP400Q96L91 3159 aa10.12□□□□□ -0.79
SRPK1-213ENST00000513367 CEP152O94986 1710 aa10.11□□□□□ -0.79
SRPK1-213ENST00000513367 NWD1Q149M9 1564 aa10.11□□□□□ -0.79
SRPK1-213ENST00000513367 LORP23490 312 aaPredicted RBP10.11□□□□□ -0.79
SRPK1-213ENST00000513367 TET3O43151 1660 aa10.11□□□□□ -0.79
SRPK1-213ENST00000513367 TMEM2Q9UHN6 1383 aa10.11□□□□□ -0.79
SRPK1-213ENST00000513367 CCDC125Q86Z20 511 aa10.1□□□□□ -0.79
SRPK1-213ENST00000513367 PIK3C2BO00750 1634 aa10.1□□□□□ -0.79
SRPK1-213ENST00000513367 C14orf37Q86TY3 774 aa10.09□□□□□ -0.79
SRPK1-213ENST00000513367 BCANQ96GW7 911 aa10.09□□□□□ -0.79
SRPK1-213ENST00000513367 WDR70Q9NW82 654 aa10.09□□□□□ -0.79
SRPK1-213ENST00000513367 CHD2O14647 1828 aaKnown RBP10.08□□□□□ -0.8
SRPK1-213ENST00000513367 MLLT3P42568 568 aaPredicted RBP10.08□□□□□ -0.8
SRPK1-213ENST00000513367 FAM160A2Q8N612 972 aaPredicted RBP10.08□□□□□ -0.8
SRPK1-213ENST00000513367 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.07□□□□□ -0.8
SRPK1-213ENST00000513367 YY1P25490 414 aa10.07□□□□□ -0.8
SRPK1-213ENST00000513367 THAP11Q96EK4 314 aa10.07□□□□□ -0.8
SRPK1-213ENST00000513367 MAST1Q9Y2H9 1570 aa10.06□□□□□ -0.8
SRPK1-213ENST00000513367 J3QL48 77 aa10.06□□□□□ -0.8
SRPK1-213ENST00000513367 ADAMTS2O95450 1211 aa10.06□□□□□ -0.8
SRPK1-213ENST00000513367 BRINP3Q76B58 766 aa10.06□□□□□ -0.8
SRPK1-213ENST00000513367 PRDM9Q9NQV7 894 aa10.06□□□□□ -0.8
SRPK1-213ENST00000513367 CCDC141Q6ZP82 1450 aa10.05□□□□□ -0.8
SRPK1-213ENST00000513367 ATF3P18847 181 aa10.05□□□□□ -0.8
SRPK1-213ENST00000513367 DEFB132Q7Z7B7 95 aa10.05□□□□□ -0.8
SRPK1-213ENST00000513367 SENP2Q9HC62 589 aa10.05□□□□□ -0.8
SRPK1-213ENST00000513367 CAMSAP2Q08AD1 1489 aa10.04□□□□□ -0.8
SRPK1-213ENST00000513367 EFCAB6Q5THR3 1501 aa10.04□□□□□ -0.8
SRPK1-213ENST00000513367 GMPRP36959 345 aa10.04□□□□□ -0.8
SRPK1-213ENST00000513367 USP21Q9UK80 565 aa10.04□□□□□ -0.8
SRPK1-213ENST00000513367 SETD5Q9C0A6 1442 aa10.04□□□□□ -0.8
SRPK1-213ENST00000513367 MROH1Q8NDA8 1641 aa10.04□□□□□ -0.8
SRPK1-213ENST00000513367 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.03□□□□□ -0.8
SRPK1-213ENST00000513367 FAM181BA6NEQ2 426 aa10.03□□□□□ -0.8
SRPK1-213ENST00000513367 MORN1Q5T089 497 aa10.03□□□□□ -0.8
SRPK1-213ENST00000513367 SNIP1Q8TAD8 396 aaKnown RBP10.03□□□□□ -0.8
SRPK1-213ENST00000513367 BBXQ8WY36 941 aaPredicted RBP10.03□□□□□ -0.8
SRPK1-213ENST00000513367 LRRC59Q96AG4 307 aaKnown RBP10.03□□□□□ -0.8
SRPK1-213ENST00000513367 C19orf44Q9H6X5 657 aa10.03□□□□□ -0.8
SRPK1-213ENST00000513367 TRPC5Q9UL62 973 aaPredicted RBP10.03□□□□□ -0.8
SRPK1-213ENST00000513367 FYCO1Q9BQS8 1478 aa10.03□□□□□ -0.8
SRPK1-213ENST00000513367 WNT7AO00755 349 aa10.02□□□□□ -0.81
SRPK1-213ENST00000513367 DDX17Q92841 729 aaKnown RBP10.02□□□□□ -0.81
SRPK1-213ENST00000513367 HPS1Q92902 700 aa10.02□□□□□ -0.81
SRPK1-213ENST00000513367 MTUS2Q5JR59 1369 aa10.01□□□□□ -0.81
SRPK1-213ENST00000513367 PNPLA6Q8IY17 1366 aa10.01□□□□□ -0.81
SRPK1-213ENST00000513367 NCOA3Q9Y6Q9 1424 aa10.01□□□□□ -0.81
SRPK1-213ENST00000513367 NHSL1Q5SYE7 1610 aa10.01□□□□□ -0.81
SRPK1-213ENST00000513367 HRCP23327 699 aa10.01□□□□□ -0.81
SRPK1-213ENST00000513367 IDI1Q13907 227 aa10.01□□□□□ -0.81
SRPK1-213ENST00000513367 ZSCAN1Q8NBB4 408 aa10.01□□□□□ -0.81
SRPK1-213ENST00000513367 TSPY4P0CV99 314 aa10□□□□□ -0.81
SRPK1-213ENST00000513367 TSPY10P0CW01 314 aa10□□□□□ -0.81
SRPK1-213ENST00000513367 SUZ12Q15022 739 aaKnown RBP10□□□□□ -0.81
SRPK1-213ENST00000513367 RSPH4AQ5TD94 716 aa10□□□□□ -0.81
SRPK1-213ENST00000513367 ASXL1Q8IXJ9 1541 aa10□□□□□ -0.81
SRPK1-213ENST00000513367 EIF2AK4Q9P2K8 1649 aaKnown RBP10□□□□□ -0.81
SRPK1-213ENST00000513367 ATRNO75882 1429 aa9.99□□□□□ -0.81
SRPK1-213ENST00000513367 BLMP54132 1417 aaPredicted RBP9.99□□□□□ -0.81
SRPK1-213ENST00000513367 PXYLP1Q8TE99 480 aa9.99□□□□□ -0.81
SRPK1-213ENST00000513367 MRGPRX2Q96LB1 330 aa9.99□□□□□ -0.81
SRPK1-213ENST00000513367 ARHGAP31Q2M1Z3 1444 aa9.99□□□□□ -0.81
SRPK1-213ENST00000513367 ZBTB24O43167 697 aaPredicted RBP9.98□□□□□ -0.81
SRPK1-213ENST00000513367 FUT2Q10981 343 aa9.98□□□□□ -0.81
SRPK1-213ENST00000513367 SLC27A5Q9Y2P5 690 aa9.98□□□□□ -0.81
SRPK1-213ENST00000513367 FMNL1O95466 1100 aaPredicted RBP9.97□□□□□ -0.81
SRPK1-213ENST00000513367 SF3B2Q13435 895 aaKnown RBP9.97□□□□□ -0.81
SRPK1-213ENST00000513367 FNBP4Q8N3X1 1017 aaPredicted RBP9.97□□□□□ -0.81
SRPK1-213ENST00000513367 SPRYD3Q8NCJ5 442 aa9.97□□□□□ -0.81
SRPK1-213ENST00000513367 SLC16A10Q8TF71 515 aa9.97□□□□□ -0.81
SRPK1-213ENST00000513367 KIFC2Q96AC6 838 aa9.97□□□□□ -0.81
SRPK1-213ENST00000513367 NXF1Q9UBU9 619 aaKnown RBP9.97□□□□□ -0.81
SRPK1-213ENST00000513367 NUTM2FA1L443 756 aa9.96□□□□□ -0.82
SRPK1-213ENST00000513367 BRWD3Q6RI45 1802 aa9.96□□□□□ -0.82
SRPK1-213ENST00000513367 MYO5BQ9ULV0 1848 aa9.96□□□□□ -0.82
SRPK1-213ENST00000513367 SENP3-EIF4A1A0A087X0R7 540 aa9.95□□□□□ -0.82
SRPK1-213ENST00000513367 VEGFBP49765 207 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms