RNA–Protein interactions for RNA: ENST00000513259.5

SNHG4-207, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 5

Gene SNHG4, Length 444 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-207ENST00000513259 LRRC4BQ9NT99 713 aa12.73□□□□□ -0.37
SNHG4-207ENST00000513259 GOLGB1Q14789 3259 aaKnown RBP12.73□□□□□ -0.37
SNHG4-207ENST00000513259 FXR2P51116 673 aaKnown RBP eCLIP12.72□□□□□ -0.37
SNHG4-207ENST00000513259 ABCC6O95255 1503 aa12.72□□□□□ -0.37
SNHG4-207ENST00000513259 MON2Q7Z3U7 1717 aa12.71□□□□□ -0.37
SNHG4-207ENST00000513259 ERBB3P21860 1342 aa12.71□□□□□ -0.37
SNHG4-207ENST00000513259 IL2RBP14784 551 aa12.71□□□□□ -0.37
SNHG4-207ENST00000513259 GPR162Q16538 588 aa12.71□□□□□ -0.37
SNHG4-207ENST00000513259 LTN1O94822 1766 aa12.71□□□□□ -0.38
SNHG4-207ENST00000513259 MAP3K5Q99683 1374 aa12.7□□□□□ -0.38
SNHG4-207ENST00000513259 NME9Q86XW9 330 aa12.7□□□□□ -0.38
SNHG4-207ENST00000513259 ANKRD24Q8TF21 1146 aa12.7□□□□□ -0.38
SNHG4-207ENST00000513259 USP31Q70CQ4 1352 aa12.69□□□□□ -0.38
SNHG4-207ENST00000513259 KLHL34Q8N239 644 aa12.69□□□□□ -0.38
SNHG4-207ENST00000513259 SIN3AQ96ST3 1273 aa12.69□□□□□ -0.38
SNHG4-207ENST00000513259 ROCK2O75116 1388 aaKnown RBP12.69□□□□□ -0.38
SNHG4-207ENST00000513259 KCNQ4P56696 695 aa12.68□□□□□ -0.38
SNHG4-207ENST00000513259 DDX54Q8TDD1 881 aaKnown RBP12.68□□□□□ -0.38
SNHG4-207ENST00000513259 CEP350Q5VT06 3117 aa12.68□□□□□ -0.38
SNHG4-207ENST00000513259 USP54Q70EL1 1684 aa12.67□□□□□ -0.38
SNHG4-207ENST00000513259 PELP1Q8IZL8 1130 aaKnown RBP12.67□□□□□ -0.38
SNHG4-207ENST00000513259 SLC16A10Q8TF71 515 aa12.67□□□□□ -0.38
SNHG4-207ENST00000513259 QSER1Q2KHR3 1735 aa12.67□□□□□ -0.38
SNHG4-207ENST00000513259 SBNO2Q9Y2G9 1366 aa12.67□□□□□ -0.38
SNHG4-207ENST00000513259 CD163L1Q9NR16 1453 aa12.66□□□□□ -0.38
SNHG4-207ENST00000513259 PNPLA7Q6ZV29 1317 aa12.66□□□□□ -0.38
SNHG4-207ENST00000513259 COL24A1Q17RW2 1714 aa12.66□□□□□ -0.38
SNHG4-207ENST00000513259 NEUROD1Q13562 356 aa12.66□□□□□ -0.38
SNHG4-207ENST00000513259 SLC27A3Q5K4L6 730 aa12.66□□□□□ -0.38
SNHG4-207ENST00000513259 TMC1Q8TDI8 760 aa12.66□□□□□ -0.38
SNHG4-207ENST00000513259 TUBGCP6Q96RT7 1819 aa12.66□□□□□ -0.38
SNHG4-207ENST00000513259 POLD1P28340 1107 aa12.65□□□□□ -0.38
SNHG4-207ENST00000513259 NLGN2Q8NFZ4 835 aa12.65□□□□□ -0.38
SNHG4-207ENST00000513259 LTV1Q96GA3 475 aaPredicted RBP12.65□□□□□ -0.38
SNHG4-207ENST00000513259 SLC12A5Q9H2X9 1139 aa12.65□□□□□ -0.38
SNHG4-207ENST00000513259 GIGYF1O75420 1035 aaPredicted RBP12.64□□□□□ -0.39
SNHG4-207ENST00000513259 PRIM1P49642 420 aaKnown RBP12.64□□□□□ -0.39
SNHG4-207ENST00000513259 TFCP2L1Q9NZI6 479 aa12.64□□□□□ -0.39
SNHG4-207ENST00000513259 PRR29P0C7W0 189 aa12.63□□□□□ -0.39
SNHG4-207ENST00000513259 HDGFL2Q7Z4V5 671 aaPredicted RBP12.63□□□□□ -0.39
SNHG4-207ENST00000513259 IP6K1Q92551 441 aa12.63□□□□□ -0.39
SNHG4-207ENST00000513259 SYTL4Q96C24 671 aaPredicted RBP12.63□□□□□ -0.39
SNHG4-207ENST00000513259 LY75O60449 1722 aa12.62□□□□□ -0.39
SNHG4-207ENST00000513259 SHANK3Q9BYB0 1731 aa12.62□□□□□ -0.39
SNHG4-207ENST00000513259 RGPD2P0DJD1 1756 aa12.61□□□□□ -0.39
SNHG4-207ENST00000513259 YBX3P16989 372 aaKnown RBP eCLIP12.61□□□□□ -0.39
SNHG4-207ENST00000513259 DOT1LQ8TEK3 1739 aa12.61□□□□□ -0.39
SNHG4-207ENST00000513259 EDC4Q6P2E9 1401 aaKnown RBP12.61□□□□□ -0.39
SNHG4-207ENST00000513259 NSD2O96028 1365 aa12.6□□□□□ -0.39
SNHG4-207ENST00000513259 ANKRD36BQ8N2N9 1353 aa12.6□□□□□ -0.39
SNHG4-207ENST00000513259 FBLN1P23142 703 aa12.6□□□□□ -0.39
SNHG4-207ENST00000513259 A0A1W2PP64 1363 aa12.59□□□□□ -0.39
SNHG4-207ENST00000513259 FAM208AQ9UK61 1670 aaKnown RBP12.59□□□□□ -0.39
SNHG4-207ENST00000513259 IFFO2Q5TF58 517 aa12.59□□□□□ -0.39
SNHG4-207ENST00000513259 COL23A1Q86Y22 540 aaPredicted RBP12.59□□□□□ -0.39
SNHG4-207ENST00000513259 ZCRB1Q8TBF4 217 aaKnown RBP12.59□□□□□ -0.39
SNHG4-207ENST00000513259 CARD11Q9BXL7 1154 aa12.59□□□□□ -0.39
SNHG4-207ENST00000513259 TERF2IPQ9NYB0 399 aa12.59□□□□□ -0.39
SNHG4-207ENST00000513259 GRIN3BO60391 1043 aa12.58□□□□□ -0.4
SNHG4-207ENST00000513259 MSL1Q68DK7 614 aa12.58□□□□□ -0.4
SNHG4-207ENST00000513259 CCNL1Q9UK58 526 aaPredicted RBP12.58□□□□□ -0.4
SNHG4-207ENST00000513259 MAP3K19Q56UN5 1328 aa12.58□□□□□ -0.4
SNHG4-207ENST00000513259 PRKAR2AP13861 404 aaKnown RBP12.57□□□□□ -0.4
SNHG4-207ENST00000513259 HOXC9P31274 260 aa12.57□□□□□ -0.4
SNHG4-207ENST00000513259 AMPHP49418 695 aa12.56□□□□□ -0.4
SNHG4-207ENST00000513259 MEGF6O75095 1541 aa12.56□□□□□ -0.4
SNHG4-207ENST00000513259 COG3Q96JB2 828 aa12.55□□□□□ -0.4
SNHG4-207ENST00000513259 ATP10DQ9P241 1426 aa12.54□□□□□ -0.4
SNHG4-207ENST00000513259 NBPF6Q5VWK0 638 aa12.54□□□□□ -0.4
SNHG4-207ENST00000513259 USHBP1Q8N6Y0 703 aa12.54□□□□□ -0.4
SNHG4-207ENST00000513259 NBPF4Q96M43 638 aa12.54□□□□□ -0.4
SNHG4-207ENST00000513259 PUS7Q96PZ0 661 aaKnown RBP12.54□□□□□ -0.4
SNHG4-207ENST00000513259 USP47Q96K76 1375 aa12.54□□□□□ -0.4
SNHG4-207ENST00000513259 C5P01031 1676 aa12.52□□□□□ -0.4
SNHG4-207ENST00000513259 CD2APQ9Y5K6 639 aa12.52□□□□□ -0.41
SNHG4-207ENST00000513259 TAF1LQ8IZX4 1826 aa12.52□□□□□ -0.41
SNHG4-207ENST00000513259 RRS1Q15050 365 aaKnown RBP12.51□□□□□ -0.41
SNHG4-207ENST00000513259 ZNF526Q8TF50 670 aaPredicted RBP12.51□□□□□ -0.41
SNHG4-207ENST00000513259 SMIM5Q71RC9 77 aa12.5□□□□□ -0.41
SNHG4-207ENST00000513259 RAPGEF4Q8WZA2 1011 aa12.5□□□□□ -0.41
SNHG4-207ENST00000513259 TESK2Q96S53 571 aa12.5□□□□□ -0.41
SNHG4-207ENST00000513259 GPBP1L1Q9HC44 474 aaPredicted RBP12.5□□□□□ -0.41
SNHG4-207ENST00000513259 CGNL1Q0VF96 1302 aa12.49□□□□□ -0.41
SNHG4-207ENST00000513259 TATP17735 454 aaPredicted RBP12.49□□□□□ -0.41
SNHG4-207ENST00000513259 MPRIPQ6WCQ1 1025 aa12.49□□□□□ -0.41
SNHG4-207ENST00000513259 AMIGO3Q86WK7 504 aa12.49□□□□□ -0.41
SNHG4-207ENST00000513259 FLAD1Q8NFF5 587 aa12.49□□□□□ -0.41
SNHG4-207ENST00000513259 WWC3Q9ULE0 1092 aa12.49□□□□□ -0.41
SNHG4-207ENST00000513259 PALLDQ8WX93 1383 aa12.48□□□□□ -0.41
SNHG4-207ENST00000513259 ST20-MTHFSA0A0A6YYL1 179 aa12.48□□□□□ -0.41
SNHG4-207ENST00000513259 FYB1O15117 783 aa12.48□□□□□ -0.41
SNHG4-207ENST00000513259 HSP90AB2PQ58FF8 381 aa12.48□□□□□ -0.41
SNHG4-207ENST00000513259 GGNBP2Q9H3C7 697 aa12.48□□□□□ -0.41
SNHG4-207ENST00000513259 ITGB4P16144 1822 aa12.48□□□□□ -0.41
SNHG4-207ENST00000513259 RTL1A6NKG5 1358 aa12.47□□□□□ -0.41
SNHG4-207ENST00000513259 ADCY9O60503 1353 aa12.47□□□□□ -0.41
SNHG4-207ENST00000513259 HSPA6P17066 643 aa12.47□□□□□ -0.41
SNHG4-207ENST00000513259 C4BP0C0L5 1744 aa12.47□□□□□ -0.41
SNHG4-207ENST00000513259 TOGARAM1Q9Y4F4 1720 aa12.46□□□□□ -0.41
SNHG4-207ENST00000513259 IGSF1Q8N6C5 1336 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms