RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 GRIN3BO60391 1043 aa19.88■□□□□ 0.77
SPCS3-204ENST00000513139 PELP1Q8IZL8 1130 aaKnown RBP19.88■□□□□ 0.77
SPCS3-204ENST00000513139 EDC4Q6P2E9 1401 aaKnown RBP19.86■□□□□ 0.77
SPCS3-204ENST00000513139 ANKRD36BQ8N2N9 1353 aa19.86■□□□□ 0.77
SPCS3-204ENST00000513139 NLGN2Q8NFZ4 835 aa19.86■□□□□ 0.77
SPCS3-204ENST00000513139 DDX54Q8TDD1 881 aaKnown RBP19.86■□□□□ 0.77
SPCS3-204ENST00000513139 IP6K1Q92551 441 aa19.85■□□□□ 0.77
SPCS3-204ENST00000513139 HDGFL2Q7Z4V5 671 aaPredicted RBP19.84■□□□□ 0.77
SPCS3-204ENST00000513139 RGPD2P0DJD1 1756 aa19.83■□□□□ 0.77
SPCS3-204ENST00000513139 PRIM1P49642 420 aaKnown RBP19.83■□□□□ 0.77
SPCS3-204ENST00000513139 YBX3P16989 372 aaKnown RBP eCLIP19.82■□□□□ 0.76
SPCS3-204ENST00000513139 SYTL4Q96C24 671 aaPredicted RBP19.82■□□□□ 0.76
SPCS3-204ENST00000513139 NSD2O96028 1365 aa19.82■□□□□ 0.76
SPCS3-204ENST00000513139 KCNQ4P56696 695 aa19.81■□□□□ 0.76
SPCS3-204ENST00000513139 TERF2IPQ9NYB0 399 aa19.8■□□□□ 0.76
SPCS3-204ENST00000513139 TAF1LQ8IZX4 1826 aa19.79■□□□□ 0.76
SPCS3-204ENST00000513139 C5P01031 1676 aa19.79■□□□□ 0.76
SPCS3-204ENST00000513139 HMGB2P26583 209 aaKnown RBP19.79■□□□□ 0.76
SPCS3-204ENST00000513139 TMC1Q8TDI8 760 aa19.79■□□□□ 0.76
SPCS3-204ENST00000513139 SLC12A5Q9H2X9 1139 aa19.79■□□□□ 0.76
SPCS3-204ENST00000513139 CCNL1Q9UK58 526 aaPredicted RBP19.79■□□□□ 0.76
SPCS3-204ENST00000513139 COL23A1Q86Y22 540 aaPredicted RBP19.78■□□□□ 0.76
SPCS3-204ENST00000513139 ZCRB1Q8TBF4 217 aaKnown RBP19.78■□□□□ 0.76
SPCS3-204ENST00000513139 PUS7Q96PZ0 661 aaKnown RBP19.78■□□□□ 0.76
SPCS3-204ENST00000513139 ATP10DQ9P241 1426 aa19.77■□□□□ 0.76
SPCS3-204ENST00000513139 A0A1W2PP64 1363 aa19.77■□□□□ 0.76
SPCS3-204ENST00000513139 USP47Q96K76 1375 aa19.76■□□□□ 0.75
SPCS3-204ENST00000513139 LTV1Q96GA3 475 aaPredicted RBP19.76■□□□□ 0.75
SPCS3-204ENST00000513139 CD2APQ9Y5K6 639 aa19.76■□□□□ 0.75
SPCS3-204ENST00000513139 SIN3AQ96ST3 1273 aa19.75■□□□□ 0.75
SPCS3-204ENST00000513139 MEGF6O75095 1541 aa19.74■□□□□ 0.75
SPCS3-204ENST00000513139 CGNL1Q0VF96 1302 aa19.74■□□□□ 0.75
SPCS3-204ENST00000513139 HOXC9P31274 260 aa19.73■□□□□ 0.75
SPCS3-204ENST00000513139 FLAD1Q8NFF5 587 aa19.73■□□□□ 0.75
SPCS3-204ENST00000513139 GPBP1L1Q9HC44 474 aaPredicted RBP19.73■□□□□ 0.75
SPCS3-204ENST00000513139 MAP3K19Q56UN5 1328 aa19.73■□□□□ 0.75
SPCS3-204ENST00000513139 ADCY9O60503 1353 aa19.72■□□□□ 0.75
SPCS3-204ENST00000513139 HSPA6P17066 643 aa19.71■□□□□ 0.75
SPCS3-204ENST00000513139 AMPHP49418 695 aa19.71■□□□□ 0.75
SPCS3-204ENST00000513139 COG3Q96JB2 828 aa19.71■□□□□ 0.75
SPCS3-204ENST00000513139 CARD11Q9BXL7 1154 aa19.71■□□□□ 0.75
SPCS3-204ENST00000513139 NEUROD1Q13562 356 aa19.7■□□□□ 0.74
SPCS3-204ENST00000513139 MSL1Q68DK7 614 aa19.7■□□□□ 0.74
SPCS3-204ENST00000513139 RTL1A6NKG5 1358 aa19.7■□□□□ 0.74
SPCS3-204ENST00000513139 ITGB4P16144 1822 aa19.69■□□□□ 0.74
SPCS3-204ENST00000513139 UBR3Q6ZT12 1888 aa19.69■□□□□ 0.74
SPCS3-204ENST00000513139 C4BP0C0L5 1744 aa19.68■□□□□ 0.74
SPCS3-204ENST00000513139 RAPGEF4Q8WZA2 1011 aa19.66■□□□□ 0.74
SPCS3-204ENST00000513139 TOGARAM1Q9Y4F4 1720 aa19.65■□□□□ 0.74
SPCS3-204ENST00000513139 NBPF6Q5VWK0 638 aa19.65■□□□□ 0.74
SPCS3-204ENST00000513139 NBPF4Q96M43 638 aa19.65■□□□□ 0.74
SPCS3-204ENST00000513139 FOXD4L1Q9NU39 408 aa19.65■□□□□ 0.74
SPCS3-204ENST00000513139 PCDH11XQ9BZA7 1347 aa19.64■□□□□ 0.73
SPCS3-204ENST00000513139 PCDH11YQ9BZA8 1340 aa19.64■□□□□ 0.73
SPCS3-204ENST00000513139 PALLDQ8WX93 1383 aa19.64■□□□□ 0.73
SPCS3-204ENST00000513139 SMG6Q86US8 1419 aaKnown RBP19.64■□□□□ 0.73
SPCS3-204ENST00000513139 NSD3Q9BZ95 1437 aa19.63■□□□□ 0.73
SPCS3-204ENST00000513139 FBLN1P23142 703 aa19.63■□□□□ 0.73
SPCS3-204ENST00000513139 SLC24A1O60721 1099 aa19.62■□□□□ 0.73
SPCS3-204ENST00000513139 TATP17735 454 aaPredicted RBP19.62■□□□□ 0.73
SPCS3-204ENST00000513139 IGSF1Q8N6C5 1336 aa19.61■□□□□ 0.73
SPCS3-204ENST00000513139 MAP2P11137 1827 aaKnown RBP19.61■□□□□ 0.73
SPCS3-204ENST00000513139 ZNF526Q8TF50 670 aaPredicted RBP19.61■□□□□ 0.73
SPCS3-204ENST00000513139 SMARCC1Q92922 1105 aaPredicted RBP19.61■□□□□ 0.73
SPCS3-204ENST00000513139 PKD1L3Q7Z443 1732 aa19.6■□□□□ 0.73
SPCS3-204ENST00000513139 MPRIPQ6WCQ1 1025 aa19.6■□□□□ 0.73
SPCS3-204ENST00000513139 AK7Q96M32 723 aa19.6■□□□□ 0.73
SPCS3-204ENST00000513139 CICQ96RK0 1608 aaPredicted RBP19.6■□□□□ 0.73
SPCS3-204ENST00000513139 RRS1Q15050 365 aaKnown RBP19.59■□□□□ 0.73
SPCS3-204ENST00000513139 USHBP1Q8N6Y0 703 aa19.59■□□□□ 0.73
SPCS3-204ENST00000513139 TESK2Q96S53 571 aa19.59■□□□□ 0.73
SPCS3-204ENST00000513139 KIF13BQ9NQT8 1826 aa19.59■□□□□ 0.73
SPCS3-204ENST00000513139 INSRP06213 1382 aa19.58■□□□□ 0.73
SPCS3-204ENST00000513139 KIF24Q5T7B8 1368 aa19.58■□□□□ 0.73
SPCS3-204ENST00000513139 KIF3CO14782 793 aa19.57■□□□□ 0.72
SPCS3-204ENST00000513139 SSFA2P28290 1259 aa19.57■□□□□ 0.72
SPCS3-204ENST00000513139 KIF20BQ96Q89 1820 aa19.57■□□□□ 0.72
SPCS3-204ENST00000513139 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.56■□□□□ 0.72
SPCS3-204ENST00000513139 FYB1O15117 783 aa19.56■□□□□ 0.72
SPCS3-204ENST00000513139 CYP27B1O15528 508 aa19.56■□□□□ 0.72
SPCS3-204ENST00000513139 AMIGO3Q86WK7 504 aa19.56■□□□□ 0.72
SPCS3-204ENST00000513139 ZBTB22O15209 634 aa19.55■□□□□ 0.72
SPCS3-204ENST00000513139 APLP1P51693 650 aa19.54■□□□□ 0.72
SPCS3-204ENST00000513139 FLT4P35916 1363 aa19.54■□□□□ 0.72
SPCS3-204ENST00000513139 PHF14O94880 888 aa19.53■□□□□ 0.72
SPCS3-204ENST00000513139 NKX1-1Q15270 411 aaPredicted RBP19.53■□□□□ 0.72
SPCS3-204ENST00000513139 HSP90AB2PQ58FF8 381 aa19.53■□□□□ 0.72
SPCS3-204ENST00000513139 KIAA1551Q9HCM1 1747 aa19.53■□□□□ 0.72
SPCS3-204ENST00000513139 ST20-MTHFSA0A0A6YYL1 179 aa19.52■□□□□ 0.72
SPCS3-204ENST00000513139 PIGBQ92521 554 aa19.52■□□□□ 0.72
SPCS3-204ENST00000513139 GGNBP2Q9H3C7 697 aa19.52■□□□□ 0.72
SPCS3-204ENST00000513139 N4BP2Q86UW6 1770 aaPredicted RBP19.52■□□□□ 0.71
SPCS3-204ENST00000513139 LOC102724428A0A0B4J2F2 783 aa19.51■□□□□ 0.71
SPCS3-204ENST00000513139 SIK1P57059 783 aa19.51■□□□□ 0.71
SPCS3-204ENST00000513139 NCAPD2Q15021 1401 aa19.51■□□□□ 0.71
SPCS3-204ENST00000513139 BRCA1P38398 1863 aaKnown RBP19.5■□□□□ 0.71
SPCS3-204ENST00000513139 TOMM70O94826 608 aa19.5■□□□□ 0.71
SPCS3-204ENST00000513139 WWC3Q9ULE0 1092 aa19.5■□□□□ 0.71
SPCS3-204ENST00000513139 TONSLQ96HA7 1378 aa19.49■□□□□ 0.71
SPCS3-204ENST00000513139 DNAJC5GQ8N7S2 189 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms