RNA–Protein interactions for RNA: ENST00000513121.1

MATR3-221, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-221ENST00000513121 PRIM1P49642 420 aaKnown RBP26.32■■□□□ 1.8
MATR3-221ENST00000513121 RAPGEF4Q8WZA2 1011 aa26.32■■□□□ 1.8
MATR3-221ENST00000513121 PDGFDQ9GZP0 370 aaPredicted RBP26.32■■□□□ 1.8
MATR3-221ENST00000513121 TATP17735 454 aaPredicted RBP26.31■■□□□ 1.8
MATR3-221ENST00000513121 LRP5O75197 1615 aa26.31■■□□□ 1.8
MATR3-221ENST00000513121 EYA1Q99502 592 aa26.3■■□□□ 1.8
MATR3-221ENST00000513121 NHSQ6T4R5 1651 aa26.3■■□□□ 1.8
MATR3-221ENST00000513121 RGPD3A6NKT7 1758 aaPredicted RBP26.28■■□□□ 1.8
MATR3-221ENST00000513121 RGPD4Q7Z3J3 1758 aa26.28■■□□□ 1.8
MATR3-221ENST00000513121 LRRC4BQ9NT99 713 aa26.28■■□□□ 1.8
MATR3-221ENST00000513121 SYTL4Q96C24 671 aaPredicted RBP26.27■■□□□ 1.8
MATR3-221ENST00000513121 NSD2O96028 1365 aa26.26■■□□□ 1.79
MATR3-221ENST00000513121 EIF4A2Q14240 407 aaKnown RBP26.26■■□□□ 1.79
MATR3-221ENST00000513121 CYP27B1O15528 508 aa26.25■■□□□ 1.79
MATR3-221ENST00000513121 SLC15A2Q16348 729 aa26.25■■□□□ 1.79
MATR3-221ENST00000513121 NCAPD2Q15021 1401 aa26.24■■□□□ 1.79
MATR3-221ENST00000513121 MORC1Q86VD1 984 aa26.24■■□□□ 1.79
MATR3-221ENST00000513121 STK32BQ9NY57 414 aa26.24■■□□□ 1.79
MATR3-221ENST00000513121 KNSTRNQ9Y448 316 aa26.24■■□□□ 1.79
MATR3-221ENST00000513121 SHANK3Q9BYB0 1731 aa26.23■■□□□ 1.79
MATR3-221ENST00000513121 AMER1Q5JTC6 1135 aaPredicted RBP26.23■■□□□ 1.79
MATR3-221ENST00000513121 KCNQ4P56696 695 aa26.22■■□□□ 1.79
MATR3-221ENST00000513121 ZNF827Q17R98 1081 aa26.21■■□□□ 1.79
MATR3-221ENST00000513121 BTAF1O14981 1849 aa26.21■■□□□ 1.79
MATR3-221ENST00000513121 PCDH11XQ9BZA7 1347 aa26.2■■□□□ 1.79
MATR3-221ENST00000513121 PCDH11YQ9BZA8 1340 aa26.2■■□□□ 1.79
MATR3-221ENST00000513121 ANKRD26Q9UPS8 1709 aa26.2■■□□□ 1.79
MATR3-221ENST00000513121 SPON1Q9HCB6 807 aa26.2■■□□□ 1.78
MATR3-221ENST00000513121 PER1O15534 1290 aaPredicted RBP26.19■■□□□ 1.78
MATR3-221ENST00000513121 ZBTB7AO95365 584 aa26.19■■□□□ 1.78
MATR3-221ENST00000513121 MAP2P11137 1827 aaKnown RBP26.18■■□□□ 1.78
MATR3-221ENST00000513121 KAT6BQ8WYB5 2073 aa26.18■■□□□ 1.78
MATR3-221ENST00000513121 SLC27A3Q5K4L6 730 aa26.16■■□□□ 1.78
MATR3-221ENST00000513121 AKT1S1Q96B36 256 aa26.15■■□□□ 1.78
MATR3-221ENST00000513121 NKX1-1Q15270 411 aaPredicted RBP26.14■■□□□ 1.78
MATR3-221ENST00000513121 ATF5Q9Y2D1 282 aaPredicted RBP26.14■■□□□ 1.78
MATR3-221ENST00000513121 DOT1LQ8TEK3 1739 aa26.14■■□□□ 1.77
MATR3-221ENST00000513121 IGSF1Q8N6C5 1336 aa26.14■■□□□ 1.77
MATR3-221ENST00000513121 MPRIPQ6WCQ1 1025 aa26.13■■□□□ 1.77
MATR3-221ENST00000513121 SPG7Q9UQ90 795 aa26.13■■□□□ 1.77
MATR3-221ENST00000513121 PAPPAQ13219 1627 aa26.13■■□□□ 1.77
MATR3-221ENST00000513121 PTGER2P43116 358 aa26.12■■□□□ 1.77
MATR3-221ENST00000513121 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.12■■□□□ 1.77
MATR3-221ENST00000513121 CASZ1Q86V15 1759 aa26.12■■□□□ 1.77
MATR3-221ENST00000513121 AEBP1Q8IUX7 1158 aa26.1■■□□□ 1.77
MATR3-221ENST00000513121 CCNL1Q9UK58 526 aaPredicted RBP26.1■■□□□ 1.77
MATR3-221ENST00000513121 PHKG2P15735 406 aa26.09■■□□□ 1.77
MATR3-221ENST00000513121 CC2D1BQ5T0F9 858 aaKnown RBP26.09■■□□□ 1.77
MATR3-221ENST00000513121 PIGBQ92521 554 aa26.09■■□□□ 1.77
MATR3-221ENST00000513121 IL13P35225 146 aa26.08■■□□□ 1.77
MATR3-221ENST00000513121 PPP1R1BQ9UD71 204 aaPredicted RBP26.08■■□□□ 1.77
MATR3-221ENST00000513121 PKD1L3Q7Z443 1732 aa26.06■■□□□ 1.76
MATR3-221ENST00000513121 MTHFSP49914 203 aa26.06■■□□□ 1.76
MATR3-221ENST00000513121 IFNL2Q8IZJ0 200 aa26.06■■□□□ 1.76
MATR3-221ENST00000513121 SGIP1Q9BQI5 828 aa26.06■■□□□ 1.76
MATR3-221ENST00000513121 MTFR1LQ9H019 292 aa26.06■■□□□ 1.76
MATR3-221ENST00000513121 PNPLA7Q6ZV29 1317 aa26.05■■□□□ 1.76
MATR3-221ENST00000513121 CNGB1Q14028 1251 aaPredicted RBP26.04■■□□□ 1.76
MATR3-221ENST00000513121 PALLDQ8WX93 1383 aa26.04■■□□□ 1.76
MATR3-221ENST00000513121 TFCP2L1Q9NZI6 479 aa26.03■■□□□ 1.76
MATR3-221ENST00000513121 TOGARAM1Q9Y4F4 1720 aa26.02■■□□□ 1.76
MATR3-221ENST00000513121 SULT6B1Q6IMI4 303 aa26.02■■□□□ 1.76
MATR3-221ENST00000513121 PLEKHO1Q53GL0 409 aaPredicted RBP26■■□□□ 1.75
MATR3-221ENST00000513121 LY75O60449 1722 aa26■■□□□ 1.75
MATR3-221ENST00000513121 ASAP1Q9ULH1 1129 aa25.99■■□□□ 1.75
MATR3-221ENST00000513121 SMARCC1Q92922 1105 aaPredicted RBP25.98■■□□□ 1.75
MATR3-221ENST00000513121 TMOD3Q9NYL9 352 aa25.98■■□□□ 1.75
MATR3-221ENST00000513121 PLEKHG2Q9H7P9 1386 aa25.97■■□□□ 1.75
MATR3-221ENST00000513121 ZNF530Q6P9A1 599 aaPredicted RBP25.97■■□□□ 1.75
MATR3-221ENST00000513121 COL23A1Q86Y22 540 aaPredicted RBP25.97■■□□□ 1.75
MATR3-221ENST00000513121 KDRP35968 1356 aa25.96■■□□□ 1.75
MATR3-221ENST00000513121 NPC1L1Q9UHC9 1359 aa25.96■■□□□ 1.75
MATR3-221ENST00000513121 AMOTQ4VCS5 1084 aa25.96■■□□□ 1.75
MATR3-221ENST00000513121 ATG3Q9NT62 314 aa25.96■■□□□ 1.75
MATR3-221ENST00000513121 AMIGO3Q86WK7 504 aa25.95■■□□□ 1.74
MATR3-221ENST00000513121 SMIM5Q71RC9 77 aa25.94■■□□□ 1.74
MATR3-221ENST00000513121 SLC16A10Q8TF71 515 aa25.94■■□□□ 1.74
MATR3-221ENST00000513121 FHDC1Q9C0D6 1143 aaPredicted RBP25.94■■□□□ 1.74
MATR3-221ENST00000513121 LOC102724428A0A0B4J2F2 783 aa25.93■■□□□ 1.74
MATR3-221ENST00000513121 HMOX1P09601 288 aa25.93■■□□□ 1.74
MATR3-221ENST00000513121 SIK1P57059 783 aa25.93■■□□□ 1.74
MATR3-221ENST00000513121 DCAF5Q96JK2 942 aa25.93■■□□□ 1.74
MATR3-221ENST00000513121 ARXQ96QS3 562 aa25.93■■□□□ 1.74
MATR3-221ENST00000513121 KDM6AO15550 1401 aaPredicted RBP25.93■■□□□ 1.74
MATR3-221ENST00000513121 ERVV-2B6SEH9 535 aa25.92■■□□□ 1.74
MATR3-221ENST00000513121 SYT17Q9BSW7 474 aa25.92■■□□□ 1.74
MATR3-221ENST00000513121 ITPK1Q13572 414 aa25.91■■□□□ 1.74
MATR3-221ENST00000513121 LINC00116Q8NCU8 138 aa25.91■■□□□ 1.74
MATR3-221ENST00000513121 ITGB4P16144 1822 aa25.91■■□□□ 1.74
MATR3-221ENST00000513121 DIAPH1O60610 1272 aaKnown RBP25.9■■□□□ 1.74
MATR3-221ENST00000513121 HSP90AB1P08238 724 aaKnown RBP25.9■■□□□ 1.74
MATR3-221ENST00000513121 MSH5O43196 834 aa25.89■■□□□ 1.74
MATR3-221ENST00000513121 SLC4A9Q96Q91 983 aa25.89■■□□□ 1.74
MATR3-221ENST00000513121 CABP4P57796 275 aa25.87■■□□□ 1.73
MATR3-221ENST00000513121 C1orf141Q5JVX7 400 aa25.87■■□□□ 1.73
MATR3-221ENST00000513121 ATP6V1AP38606 617 aa25.86■■□□□ 1.73
MATR3-221ENST00000513121 MSL1Q68DK7 614 aa25.86■■□□□ 1.73
MATR3-221ENST00000513121 TUBGCP6Q96RT7 1819 aa25.86■■□□□ 1.73
MATR3-221ENST00000513121 COL3A1P02461 1466 aaPredicted RBP25.85■■□□□ 1.73
MATR3-221ENST00000513121 NFATC2IPQ8NCF5 419 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms