RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 VPS37DQ86XT2 251 aa4.37□□□□□ -1.71
PVT1-202ENST00000512617 PIP4P2Q8N4L2 257 aa4.37□□□□□ -1.71
PVT1-202ENST00000512617 GEMIN8Q9NWZ8 242 aaKnown RBP4.37□□□□□ -1.71
PVT1-202ENST00000512617 PARP2Q9UGN5 583 aa4.37□□□□□ -1.71
PVT1-202ENST00000512617 WWC3Q9ULE0 1092 aa4.37□□□□□ -1.71
PVT1-202ENST00000512617 COMMD10Q9Y6G5 202 aa4.37□□□□□ -1.71
PVT1-202ENST00000512617 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.36□□□□□ -1.71
PVT1-202ENST00000512617 DDX11L8A8MPP1 907 aa4.36□□□□□ -1.71
PVT1-202ENST00000512617 K7ELQ4 463 aaPredicted RBP4.36□□□□□ -1.71
PVT1-202ENST00000512617 FMNL1O95466 1100 aaPredicted RBP4.36□□□□□ -1.71
PVT1-202ENST00000512617 DPYDQ12882 1025 aa4.36□□□□□ -1.71
PVT1-202ENST00000512617 OS9Q13438 667 aaPredicted RBP4.36□□□□□ -1.71
PVT1-202ENST00000512617 ENOX2Q16206 610 aaKnown RBP4.36□□□□□ -1.71
PVT1-202ENST00000512617 SLFNL1Q499Z3 407 aa4.36□□□□□ -1.71
PVT1-202ENST00000512617 CLEC4GQ6UXB4 293 aa4.36□□□□□ -1.71
PVT1-202ENST00000512617 TAS1R3Q7RTX0 852 aa4.36□□□□□ -1.71
PVT1-202ENST00000512617 C11orf96Q7Z7L8 435 aa4.36□□□□□ -1.71
PVT1-202ENST00000512617 SLF2Q8IX21 1173 aa4.36□□□□□ -1.71
PVT1-202ENST00000512617 STAG1Q8WVM7 1258 aa4.36□□□□□ -1.71
PVT1-202ENST00000512617 MTA3Q9BTC8 594 aa4.36□□□□□ -1.71
PVT1-202ENST00000512617 PCGF6Q9BYE7 350 aa4.36□□□□□ -1.71
PVT1-202ENST00000512617 SLKQ9H2G2 1235 aaPredicted RBP4.36□□□□□ -1.71
PVT1-202ENST00000512617 GNL3LQ9NVN8 582 aaKnown RBP4.36□□□□□ -1.71
PVT1-202ENST00000512617 BSDC1Q9NW68 430 aaPredicted RBP4.36□□□□□ -1.71
PVT1-202ENST00000512617 CXXC1Q9P0U4 656 aaPredicted RBP4.36□□□□□ -1.71
PVT1-202ENST00000512617 TCEAL9Q9UHQ7 104 aa4.36□□□□□ -1.71
PVT1-202ENST00000512617 PRKAB1Q9Y478 270 aa4.36□□□□□ -1.71
PVT1-202ENST00000512617 KIF3CO14782 793 aa4.35□□□□□ -1.71
PVT1-202ENST00000512617 PRPF40AO75400 957 aaKnown RBP4.35□□□□□ -1.71
PVT1-202ENST00000512617 GIGYF1O75420 1035 aaPredicted RBP4.35□□□□□ -1.71
PVT1-202ENST00000512617 KIF4AO95239 1232 aa4.35□□□□□ -1.71
PVT1-202ENST00000512617 LDHBP07195 334 aaKnown RBP4.35□□□□□ -1.71
PVT1-202ENST00000512617 PDGFRBP09619 1106 aa4.35□□□□□ -1.71
PVT1-202ENST00000512617 ARHGAP4P98171 946 aa4.35□□□□□ -1.71
PVT1-202ENST00000512617 FKBP4Q02790 459 aaKnown RBP eCLIP4.35□□□□□ -1.71
PVT1-202ENST00000512617 NR1H3Q13133 447 aa4.35□□□□□ -1.71
PVT1-202ENST00000512617 PSMD2Q13200 908 aa4.35□□□□□ -1.71
PVT1-202ENST00000512617 SF3B2Q13435 895 aaKnown RBP4.35□□□□□ -1.71
PVT1-202ENST00000512617 NCOA4Q13772 614 aa4.35□□□□□ -1.71
PVT1-202ENST00000512617 SAFB2Q14151 953 aaKnown RBP eCLIP4.35□□□□□ -1.71
PVT1-202ENST00000512617 NR6A1Q15406 480 aa4.35□□□□□ -1.71
PVT1-202ENST00000512617 ODR4Q5SWX8 454 aa4.35□□□□□ -1.71
PVT1-202ENST00000512617 CHADLQ6NUI6 762 aa4.35□□□□□ -1.71
PVT1-202ENST00000512617 TMC7Q7Z402 723 aa4.35□□□□□ -1.71
PVT1-202ENST00000512617 TMC4Q7Z404 712 aa4.35□□□□□ -1.71
PVT1-202ENST00000512617 CERKQ8TCT0 537 aa4.35□□□□□ -1.71
PVT1-202ENST00000512617 GTF3C2Q8WUA4 911 aaPredicted RBP4.35□□□□□ -1.71
PVT1-202ENST00000512617 FRMD6Q96NE9 622 aa4.35□□□□□ -1.71
PVT1-202ENST00000512617 DUSP9Q99956 384 aaKnown RBP4.35□□□□□ -1.71
PVT1-202ENST00000512617 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.35□□□□□ -1.711e-8■□□□□ 9.2
PVT1-202ENST00000512617 CECR2Q9BXF3 1484 aa4.35□□□□□ -1.71
PVT1-202ENST00000512617 FDX1P10109 184 aa4.34□□□□□ -1.71
PVT1-202ENST00000512617 LIG1P18858 919 aa4.34□□□□□ -1.71
PVT1-202ENST00000512617 MAPK8P45983 427 aa4.34□□□□□ -1.71
PVT1-202ENST00000512617 DAB2P98082 770 aa4.34□□□□□ -1.71
PVT1-202ENST00000512617 FMR1Q06787 632 aaKnown RBP eCLIP4.34□□□□□ -1.71
PVT1-202ENST00000512617 ECM1Q16610 540 aa4.34□□□□□ -1.71
PVT1-202ENST00000512617 GRIPAP1Q4V328 841 aa4.34□□□□□ -1.71
PVT1-202ENST00000512617 ILDR1Q86SU0 546 aaPredicted RBP4.34□□□□□ -1.71
PVT1-202ENST00000512617 MCF2L2Q86YR7 1114 aa4.34□□□□□ -1.71
PVT1-202ENST00000512617 CKAP2LQ8IYA6 745 aa4.34□□□□□ -1.71
PVT1-202ENST00000512617 ZNF654Q8IZM8 581 aa4.34□□□□□ -1.71
PVT1-202ENST00000512617 OGFOD1Q8N543 542 aa4.34□□□□□ -1.71
PVT1-202ENST00000512617 FAM174AQ8TBP5 190 aa4.34□□□□□ -1.71
PVT1-202ENST00000512617 ZNF594Q96JF6 807 aaPredicted RBP4.34□□□□□ -1.71
PVT1-202ENST00000512617 SCYL1Q96KG9 808 aa4.34□□□□□ -1.71
PVT1-202ENST00000512617 PRIMPOLQ96LW4 560 aa4.34□□□□□ -1.71
PVT1-202ENST00000512617 CEP89Q96ST8 783 aa4.34□□□□□ -1.71
PVT1-202ENST00000512617 SENP7Q9BQF6 1050 aa4.34□□□□□ -1.71
PVT1-202ENST00000512617 TMX1Q9H3N1 280 aa4.34□□□□□ -1.71
PVT1-202ENST00000512617 TYW1Q9NV66 732 aaKnown RBP4.34□□□□□ -1.71
PVT1-202ENST00000512617 DNMT3AQ9Y6K1 912 aaPredicted RBP4.34□□□□□ -1.71
PVT1-202ENST00000512617 RPS6KL1Q9Y6S9 549 aa4.34□□□□□ -1.71
PVT1-202ENST00000512617 CCDC189A1A4V9 331 aa4.33□□□□□ -1.72
PVT1-202ENST00000512617 CCER2I3L3R5 266 aa4.33□□□□□ -1.72
PVT1-202ENST00000512617 AMPD3Q01432 767 aa4.33□□□□□ -1.72
PVT1-202ENST00000512617 MTMR2Q13614 643 aa4.33□□□□□ -1.72
PVT1-202ENST00000512617 MTMR3Q13615 1198 aa4.33□□□□□ -1.72
PVT1-202ENST00000512617 PLEKHG4Q58EX7 1191 aa4.33□□□□□ -1.72
PVT1-202ENST00000512617 CCSAPQ6IQ19 270 aaPredicted RBP4.33□□□□□ -1.72
PVT1-202ENST00000512617 FAM43BQ6ZT52 329 aaPredicted RBP4.33□□□□□ -1.72
PVT1-202ENST00000512617 SLAIN1Q8ND83 568 aa4.33□□□□□ -1.72
PVT1-202ENST00000512617 TMC1Q8TDI8 760 aa4.33□□□□□ -1.72
PVT1-202ENST00000512617 C8orf48Q96LL4 319 aa4.33□□□□□ -1.72
PVT1-202ENST00000512617 NAP1L4Q99733 375 aaKnown RBP4.33□□□□□ -1.72
PVT1-202ENST00000512617 RBCK1Q9BYM8 510 aa4.33□□□□□ -1.72
PVT1-202ENST00000512617 TMX4Q9H1E5 349 aaPredicted RBP4.33□□□□□ -1.72
PVT1-202ENST00000512617 RCCD1A6NED2 376 aa4.32□□□□□ -1.72
PVT1-202ENST00000512617 TREHO43280 583 aa4.32□□□□□ -1.72
PVT1-202ENST00000512617 NDUFB5O43674 189 aa4.32□□□□□ -1.72
PVT1-202ENST00000512617 PLIN1O60240 522 aa4.32□□□□□ -1.72
PVT1-202ENST00000512617 HSP90AA1P07900 732 aaKnown RBP4.32□□□□□ -1.72
PVT1-202ENST00000512617 FGRP09769 529 aa4.32□□□□□ -1.72
PVT1-202ENST00000512617 FBXO45P0C2W1 286 aa4.32□□□□□ -1.72
PVT1-202ENST00000512617 ATP1A2P50993 1020 aa4.32□□□□□ -1.72
PVT1-202ENST00000512617 ATP2B2Q01814 1243 aa4.32□□□□□ -1.72
PVT1-202ENST00000512617 UBE4AQ14139 1066 aa4.32□□□□□ -1.72
PVT1-202ENST00000512617 OCLNQ16625 522 aa4.32□□□□□ -1.72
PVT1-202ENST00000512617 TYW1BQ6NUM6 668 aa4.32□□□□□ -1.72
PVT1-202ENST00000512617 DPY19L2Q6NUT2 758 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms