RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 MBIPQ9NS73 344 aa12.96□□□□□ -0.33
CPNE4-209ENST00000512055 A0A1W2PP64 1363 aa12.96□□□□□ -0.33
CPNE4-209ENST00000512055 F6X3S4 739 aa12.96□□□□□ -0.33
CPNE4-209ENST00000512055 HSP90AB2PQ58FF8 381 aa12.96□□□□□ -0.33
CPNE4-209ENST00000512055 PCMTD1Q96MG8 357 aaPredicted RBP12.96□□□□□ -0.33
CPNE4-209ENST00000512055 DMRT2Q9Y5R5 561 aa12.96□□□□□ -0.33
CPNE4-209ENST00000512055 GNAT3A8MTJ3 354 aa12.96□□□□□ -0.34
CPNE4-209ENST00000512055 ERCC4Q92889 916 aaPredicted RBP12.96□□□□□ -0.34
CPNE4-209ENST00000512055 POLKQ9UBT6 870 aa12.96□□□□□ -0.34
CPNE4-209ENST00000512055 TNRQ92752 1358 aa12.96□□□□□ -0.34
CPNE4-209ENST00000512055 GOLGA6L7A0A1B0GV03 622 aa12.95□□□□□ -0.34
CPNE4-209ENST00000512055 HSP90AB4PQ58FF6 505 aa12.95□□□□□ -0.34
CPNE4-209ENST00000512055 TICAM2Q86XR7 235 aa12.95□□□□□ -0.34
CPNE4-209ENST00000512055 RIMS2Q9UQ26 1411 aa12.95□□□□□ -0.34
CPNE4-209ENST00000512055 FOXO3O43524 673 aa12.95□□□□□ -0.34
CPNE4-209ENST00000512055 RLBP1P12271 317 aa12.95□□□□□ -0.34
CPNE4-209ENST00000512055 ZRSR2Q15696 482 aaKnown RBP12.95□□□□□ -0.34
CPNE4-209ENST00000512055 PRDM10Q9NQV6 1147 aa12.95□□□□□ -0.34
CPNE4-209ENST00000512055 ZKSCAN1P17029 563 aaPredicted RBP12.94□□□□□ -0.34
CPNE4-209ENST00000512055 EXOC6BQ9Y2D4 811 aa12.94□□□□□ -0.34
CPNE4-209ENST00000512055 MYO5CQ9NQX4 1742 aa12.94□□□□□ -0.34
CPNE4-209ENST00000512055 SRCIN1Q9C0H9 1055 aa12.94□□□□□ -0.34
CPNE4-209ENST00000512055 UHRF1BP1LA0JNW5 1464 aa12.94□□□□□ -0.34
CPNE4-209ENST00000512055 CLGNO14967 610 aa12.94□□□□□ -0.34
CPNE4-209ENST00000512055 SMARCA5O60264 1052 aaPredicted RBP12.94□□□□□ -0.34
CPNE4-209ENST00000512055 CLASRPQ8N2M8 674 aaKnown RBP12.94□□□□□ -0.34
CPNE4-209ENST00000512055 NEK4P51957 841 aa12.94□□□□□ -0.34
CPNE4-209ENST00000512055 ERCC6L2Q5T890 1561 aa12.93□□□□□ -0.34
CPNE4-209ENST00000512055 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.93□□□□□ -0.34
CPNE4-209ENST00000512055 MCTP1Q6DN14 999 aa12.93□□□□□ -0.34
CPNE4-209ENST00000512055 IL1RAPL2Q9NP60 686 aa12.93□□□□□ -0.34
CPNE4-209ENST00000512055 PPIP5K1Q6PFW1 1433 aa12.93□□□□□ -0.34
CPNE4-209ENST00000512055 ZMYND15Q9H091 742 aa12.93□□□□□ -0.34
CPNE4-209ENST00000512055 PHF8Q9UPP1 1060 aa12.93□□□□□ -0.34
CPNE4-209ENST00000512055 ERC2O15083 957 aa12.93□□□□□ -0.34
CPNE4-209ENST00000512055 MAP4K4O95819 1239 aaPredicted RBP12.93□□□□□ -0.34
CPNE4-209ENST00000512055 UBE2Q2Q8WVN8 375 aa12.93□□□□□ -0.34
CPNE4-209ENST00000512055 TRERF1Q96PN7 1200 aa12.93□□□□□ -0.34
CPNE4-209ENST00000512055 LRRCC1Q9C099 1032 aa12.93□□□□□ -0.34
CPNE4-209ENST00000512055 BTBD11A6QL63 1104 aa12.93□□□□□ -0.34
CPNE4-209ENST00000512055 NEUROD6Q96NK8 337 aa12.92□□□□□ -0.34
CPNE4-209ENST00000512055 CGNQ9P2M7 1197 aaKnown RBP12.92□□□□□ -0.34
CPNE4-209ENST00000512055 ATP10AO60312 1499 aa12.92□□□□□ -0.34
CPNE4-209ENST00000512055 MYL6BP14649 208 aa12.92□□□□□ -0.34
CPNE4-209ENST00000512055 GTF2E1P29083 439 aaPredicted RBP12.92□□□□□ -0.34
CPNE4-209ENST00000512055 RPAP2Q8IXW5 612 aaPredicted RBP12.92□□□□□ -0.34
CPNE4-209ENST00000512055 PHACTR3Q96KR7 559 aa12.92□□□□□ -0.34
CPNE4-209ENST00000512055 STRN4Q9NRL3 753 aa12.92□□□□□ -0.34
CPNE4-209ENST00000512055 TOMM22Q9NS69 142 aa12.92□□□□□ -0.34
CPNE4-209ENST00000512055 TATP17735 454 aaPredicted RBP12.92□□□□□ -0.34
CPNE4-209ENST00000512055 NAP1L1P55209 391 aaKnown RBP12.92□□□□□ -0.34
CPNE4-209ENST00000512055 KDM5CP41229 1560 aa12.92□□□□□ -0.34
CPNE4-209ENST00000512055 TTC21BQ7Z4L5 1316 aa12.91□□□□□ -0.34
CPNE4-209ENST00000512055 SRGAP3O43295 1099 aa12.91□□□□□ -0.34
CPNE4-209ENST00000512055 CCDC27Q2M243 656 aa12.91□□□□□ -0.34
CPNE4-209ENST00000512055 YTHDC2Q9H6S0 1430 aaKnown RBP12.91□□□□□ -0.34
CPNE4-209ENST00000512055 SIL1Q9H173 461 aa12.91□□□□□ -0.34
CPNE4-209ENST00000512055 NPATQ14207 1427 aa12.91□□□□□ -0.34
CPNE4-209ENST00000512055 NUCB2P80303 420 aa12.91□□□□□ -0.34
CPNE4-209ENST00000512055 CHD1O14646 1710 aa12.9□□□□□ -0.34
CPNE4-209ENST00000512055 PUS7Q96PZ0 661 aaKnown RBP12.9□□□□□ -0.34
CPNE4-209ENST00000512055 PLA2R1Q13018 1463 aa12.9□□□□□ -0.34
CPNE4-209ENST00000512055 IL16Q14005 1332 aa12.9□□□□□ -0.34
CPNE4-209ENST00000512055 H3BQV1 296 aa12.9□□□□□ -0.34
CPNE4-209ENST00000512055 IFFO2Q5TF58 517 aa12.9□□□□□ -0.34
CPNE4-209ENST00000512055 TRAK2O60296 914 aa12.9□□□□□ -0.34
CPNE4-209ENST00000512055 HMGN5P82970 282 aaKnown RBP12.9□□□□□ -0.34
CPNE4-209ENST00000512055 CNTROBQ8N137 903 aa12.9□□□□□ -0.34
CPNE4-209ENST00000512055 CCDC39Q9UFE4 941 aa12.9□□□□□ -0.34
CPNE4-209ENST00000512055 ATP6V1DQ9Y5K8 247 aa12.9□□□□□ -0.34
CPNE4-209ENST00000512055 UGGT1Q9NYU2 1555 aa12.9□□□□□ -0.35
CPNE4-209ENST00000512055 C8orf58Q8NAV2 365 aa12.89□□□□□ -0.35
CPNE4-209ENST00000512055 MAGI2Q86UL8 1455 aa12.89□□□□□ -0.35
CPNE4-209ENST00000512055 RABEP1Q15276 862 aa12.89□□□□□ -0.35
CPNE4-209ENST00000512055 MPRIPQ6WCQ1 1025 aa12.89□□□□□ -0.35
CPNE4-209ENST00000512055 CAGE1Q8TC20 777 aa12.89□□□□□ -0.35
CPNE4-209ENST00000512055 TSPYL6Q8N831 410 aa12.89□□□□□ -0.35
CPNE4-209ENST00000512055 ZHX1Q9UKY1 873 aaPredicted RBP12.89□□□□□ -0.35
CPNE4-209ENST00000512055 PREX2Q70Z35 1606 aa12.89□□□□□ -0.35
CPNE4-209ENST00000512055 TAF7Q15545 349 aaPredicted RBP12.89□□□□□ -0.35
CPNE4-209ENST00000512055 DDX54Q8TDD1 881 aaKnown RBP12.89□□□□□ -0.35
CPNE4-209ENST00000512055 NPC1L1Q9UHC9 1359 aa12.89□□□□□ -0.35
CPNE4-209ENST00000512055 VPS37CA5D8V6 355 aaPredicted RBP12.88□□□□□ -0.35
CPNE4-209ENST00000512055 FAM184AQ8NB25 1140 aa12.88□□□□□ -0.35
CPNE4-209ENST00000512055 MARCH6O60337 910 aa12.88□□□□□ -0.35
CPNE4-209ENST00000512055 EIF4A2Q14240 407 aaKnown RBP12.88□□□□□ -0.35
CPNE4-209ENST00000512055 FSD1Q9BTV5 496 aa12.88□□□□□ -0.35
CPNE4-209ENST00000512055 CDC42BPAQ5VT25 1732 aa12.88□□□□□ -0.35
CPNE4-209ENST00000512055 NASPP49321 788 aaPredicted RBP12.88□□□□□ -0.35
CPNE4-209ENST00000512055 MRE11P49959 708 aa12.88□□□□□ -0.35
CPNE4-209ENST00000512055 KCNH5Q8NCM2 988 aa12.88□□□□□ -0.35
CPNE4-209ENST00000512055 PTPRTO14522 1441 aa12.88□□□□□ -0.35
CPNE4-209ENST00000512055 ZMYM3Q14202 1370 aa12.88□□□□□ -0.35
CPNE4-209ENST00000512055 FBXW7Q969H0 707 aa12.88□□□□□ -0.35
CPNE4-209ENST00000512055 TMX4Q9H1E5 349 aaPredicted RBP12.88□□□□□ -0.35
CPNE4-209ENST00000512055 IRX3P78415 501 aaPredicted RBP12.87□□□□□ -0.35
CPNE4-209ENST00000512055 TOM1L2Q6ZVM7 507 aa12.87□□□□□ -0.35
CPNE4-209ENST00000512055 SMC3Q9UQE7 1217 aa12.87□□□□□ -0.35
CPNE4-209ENST00000512055 RNF123Q5XPI4 1314 aa12.87□□□□□ -0.35
CPNE4-209ENST00000512055 ABCC1P33527 1531 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms