RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 KIF24Q5T7B8 1368 aa12.15□□□□□ -0.46
NR1I3-230ENST00000511944 CDK12Q9NYV4 1490 aaPredicted RBP12.14□□□□□ -0.47
NR1I3-230ENST00000511944 WDR43Q15061 677 aaKnown RBP eCLIP12.14□□□□□ -0.47
NR1I3-230ENST00000511944 C14orf37Q86TY3 774 aa12.14□□□□□ -0.47
NR1I3-230ENST00000511944 FAM9BQ8IZU0 186 aa12.14□□□□□ -0.47
NR1I3-230ENST00000511944 NGDNQ8NEJ9 315 aaKnown RBP12.14□□□□□ -0.47
NR1I3-230ENST00000511944 PTCD2Q8WV60 388 aaKnown RBP12.14□□□□□ -0.47
NR1I3-230ENST00000511944 COG3Q96JB2 828 aa12.14□□□□□ -0.47
NR1I3-230ENST00000511944 YTHDC1Q96MU7 727 aaKnown RBP12.14□□□□□ -0.47
NR1I3-230ENST00000511944 DPYSL4O14531 572 aa12.13□□□□□ -0.47
NR1I3-230ENST00000511944 ATF3P18847 181 aa12.13□□□□□ -0.47
NR1I3-230ENST00000511944 GGNBP2Q9H3C7 697 aa12.13□□□□□ -0.47
NR1I3-230ENST00000511944 HNRNPUQ00839 825 aaKnown RBP eCLIP12.12□□□□□ -0.47
NR1I3-230ENST00000511944 KHSRPQ92945 711 aaKnown RBP eCLIP12.12□□□□□ -0.47
NR1I3-230ENST00000511944 COL3A1P02461 1466 aaPredicted RBP12.12□□□□□ -0.47
NR1I3-230ENST00000511944 RGPD8O14715 1765 aaPredicted RBP12.12□□□□□ -0.47
NR1I3-230ENST00000511944 PIK3C2AO00443 1686 aa12.11□□□□□ -0.47
NR1I3-230ENST00000511944 SHPRHQ149N8 1683 aa12.11□□□□□ -0.47
NR1I3-230ENST00000511944 CNGB1Q14028 1251 aaPredicted RBP12.11□□□□□ -0.47
NR1I3-230ENST00000511944 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.11□□□□□ -0.47
NR1I3-230ENST00000511944 ARIH1Q9Y4X5 557 aaPredicted RBP12.11□□□□□ -0.47
NR1I3-230ENST00000511944 PCDHGA4Q9Y5G9 962 aa12.11□□□□□ -0.47
NR1I3-230ENST00000511944 XIRP1Q702N8 1843 aaKnown RBP12.1□□□□□ -0.47
NR1I3-230ENST00000511944 MTHFSP49914 203 aa12.1□□□□□ -0.47
NR1I3-230ENST00000511944 DOK7Q18PE1 504 aa12.1□□□□□ -0.47
NR1I3-230ENST00000511944 GPR153Q6NV75 609 aa12.1□□□□□ -0.47
NR1I3-230ENST00000511944 NME9Q86XW9 330 aa12.1□□□□□ -0.47
NR1I3-230ENST00000511944 NUDCQ9Y266 331 aa12.1□□□□□ -0.47
NR1I3-230ENST00000511944 SBNO1A3KN83 1393 aa12.09□□□□□ -0.47
NR1I3-230ENST00000511944 ESCO1Q5FWF5 840 aa12.09□□□□□ -0.47
NR1I3-230ENST00000511944 PMFBP1Q8TBY8 1022 aa12.09□□□□□ -0.47
NR1I3-230ENST00000511944 ARHGEF1Q92888 912 aaKnown RBP12.09□□□□□ -0.47
NR1I3-230ENST00000511944 ZNF335Q9H4Z2 1342 aaPredicted RBP12.09□□□□□ -0.47
NR1I3-230ENST00000511944 RTL1A6NKG5 1358 aa12.08□□□□□ -0.48
NR1I3-230ENST00000511944 NUTM2FA1L443 756 aa12.08□□□□□ -0.48
NR1I3-230ENST00000511944 ARSIQ5FYB1 569 aa12.08□□□□□ -0.48
NR1I3-230ENST00000511944 POLKQ9UBT6 870 aa12.08□□□□□ -0.48
NR1I3-230ENST00000511944 TRPM3Q9HCF6 1732 aaPredicted RBP12.08□□□□□ -0.48
NR1I3-230ENST00000511944 NPHP3Q7Z494 1330 aa12.08□□□□□ -0.48
NR1I3-230ENST00000511944 PHRF1Q9P1Y6 1649 aaKnown RBP12.08□□□□□ -0.48
NR1I3-230ENST00000511944 SNPHO15079 494 aa12.07□□□□□ -0.48
NR1I3-230ENST00000511944 PDE3BQ13370 1112 aa12.07□□□□□ -0.48
NR1I3-230ENST00000511944 LCE2DQ5TA82 110 aaPredicted RBP12.07□□□□□ -0.48
NR1I3-230ENST00000511944 PNNQ9H307 717 aaKnown RBP12.07□□□□□ -0.48
NR1I3-230ENST00000511944 SLIT3O75094 1523 aa12.06□□□□□ -0.48
NR1I3-230ENST00000511944 MAP3K9P80192 1104 aa12.06□□□□□ -0.48
NR1I3-230ENST00000511944 PSME1Q06323 249 aa12.06□□□□□ -0.48
NR1I3-230ENST00000511944 ADAMTS8Q9UP79 889 aa12.06□□□□□ -0.48
NR1I3-230ENST00000511944 MED1Q15648 1581 aaPredicted RBP12.05□□□□□ -0.48
NR1I3-230ENST00000511944 LTBP4Q8N2S1 1624 aa12.05□□□□□ -0.48
NR1I3-230ENST00000511944 KCNH5Q8NCM2 988 aa12.05□□□□□ -0.48
NR1I3-230ENST00000511944 MARF1Q9Y4F3 1742 aaKnown RBP12.05□□□□□ -0.48
NR1I3-230ENST00000511944 ABCC6O95255 1503 aa12.05□□□□□ -0.48
NR1I3-230ENST00000511944 USP19O94966 1318 aa12.05□□□□□ -0.48
NR1I3-230ENST00000511944 FLT4P35916 1363 aa12.05□□□□□ -0.48
NR1I3-230ENST00000511944 ALS2Q96Q42 1657 aa12.04□□□□□ -0.48
NR1I3-230ENST00000511944 ST18O60284 1047 aa12.04□□□□□ -0.48
NR1I3-230ENST00000511944 DIAPH1O60610 1272 aaKnown RBP12.04□□□□□ -0.48
NR1I3-230ENST00000511944 TNNT2P45379 298 aaPredicted RBP12.04□□□□□ -0.48
NR1I3-230ENST00000511944 ARHGEF10O15013 1369 aa12.04□□□□□ -0.48
NR1I3-230ENST00000511944 IQSEC2Q5JU85 1478 aa12.03□□□□□ -0.48
NR1I3-230ENST00000511944 PXDNQ92626 1479 aa12.03□□□□□ -0.48
NR1I3-230ENST00000511944 NFAT5O94916 1531 aa12.03□□□□□ -0.48
NR1I3-230ENST00000511944 ZNF710Q8N1W2 664 aa12.03□□□□□ -0.48
NR1I3-230ENST00000511944 RBM33Q96EV2 1170 aaKnown RBP12.03□□□□□ -0.48
NR1I3-230ENST00000511944 FAM163AQ96GL9 167 aaPredicted RBP12.03□□□□□ -0.48
NR1I3-230ENST00000511944 ORAI2Q96SN7 254 aa12.03□□□□□ -0.48
NR1I3-230ENST00000511944 NUDT7P0C024 238 aa12.02□□□□□ -0.49
NR1I3-230ENST00000511944 PDIA6Q15084 440 aa12.02□□□□□ -0.49
NR1I3-230ENST00000511944 ABTB2Q8N961 1025 aa12.02□□□□□ -0.49
NR1I3-230ENST00000511944 RUNDC1Q96C34 613 aa12.02□□□□□ -0.49
NR1I3-230ENST00000511944 ZSWIM6Q9HCJ5 1215 aa12.02□□□□□ -0.49
NR1I3-230ENST00000511944 MAP2P11137 1827 aaKnown RBP12.02□□□□□ -0.49
NR1I3-230ENST00000511944 TNS3Q68CZ2 1445 aa12.02□□□□□ -0.49
NR1I3-230ENST00000511944 EVI5O60447 810 aa12.01□□□□□ -0.49
NR1I3-230ENST00000511944 FCHSD2O94868 740 aa12.01□□□□□ -0.49
NR1I3-230ENST00000511944 HOXB1P14653 301 aaPredicted RBP12.01□□□□□ -0.49
NR1I3-230ENST00000511944 CCDC27Q2M243 656 aa12.01□□□□□ -0.49
NR1I3-230ENST00000511944 KRT28Q7Z3Y7 464 aa12.01□□□□□ -0.49
NR1I3-230ENST00000511944 SLAIN2Q9P270 581 aa12.01□□□□□ -0.49
NR1I3-230ENST00000511944 RIMBP2O15034 1052 aa12□□□□□ -0.49
NR1I3-230ENST00000511944 SEMA3EO15041 775 aa12□□□□□ -0.49
NR1I3-230ENST00000511944 FOXO3O43524 673 aa12□□□□□ -0.49
NR1I3-230ENST00000511944 BRINP3Q76B58 766 aa12□□□□□ -0.49
NR1I3-230ENST00000511944 ANO8Q9HCE9 1232 aaPredicted RBP12□□□□□ -0.49
NR1I3-230ENST00000511944 EMILIN1Q9Y6C2 1016 aa12□□□□□ -0.49
NR1I3-230ENST00000511944 ZNF521Q96K83 1311 aa12□□□□□ -0.49
NR1I3-230ENST00000511944 NHSL1Q5SYE7 1610 aa12□□□□□ -0.49
NR1I3-230ENST00000511944 TBC1D12O60347 775 aa11.99□□□□□ -0.49
NR1I3-230ENST00000511944 IL13P35225 146 aa11.99□□□□□ -0.49
NR1I3-230ENST00000511944 SOS2Q07890 1332 aaPredicted RBP11.99□□□□□ -0.49
NR1I3-230ENST00000511944 MAP3K19Q56UN5 1328 aa11.99□□□□□ -0.49
NR1I3-230ENST00000511944 PLEKHG2Q9H7P9 1386 aa11.99□□□□□ -0.49
NR1I3-230ENST00000511944 RGPD1P0DJD0 1748 aa11.99□□□□□ -0.49
NR1I3-230ENST00000511944 PEAK1Q9H792 1746 aa11.99□□□□□ -0.49
NR1I3-230ENST00000511944 SPATA31A3Q5VYP0 1347 aa11.98□□□□□ -0.49
NR1I3-230ENST00000511944 U2AF1L5P0DN76 240 aaPredicted RBP11.98□□□□□ -0.49
NR1I3-230ENST00000511944 U2AF1Q01081 240 aaKnown RBP eCLIP11.98□□□□□ -0.49
NR1I3-230ENST00000511944 AHDC1Q5TGY3 1603 aaPredicted RBP11.97□□□□□ -0.49
NR1I3-230ENST00000511944 NEFMP07197 916 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms