RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 ANKRD36BQ8N2N9 1353 aa27.22■■□□□ 1.95
HMGCS1-206ENST00000511774 SYTL4Q96C24 671 aaPredicted RBP27.22■■□□□ 1.95
HMGCS1-206ENST00000511774 EDC4Q6P2E9 1401 aaKnown RBP27.22■■□□□ 1.95
HMGCS1-206ENST00000511774 IP6K1Q92551 441 aa27.21■■□□□ 1.95
HMGCS1-206ENST00000511774 COL23A1Q86Y22 540 aaPredicted RBP27.2■■□□□ 1.94
HMGCS1-206ENST00000511774 TMC1Q8TDI8 760 aa27.2■■□□□ 1.94
HMGCS1-206ENST00000511774 A0A1W2PP64 1363 aa27.19■■□□□ 1.94
HMGCS1-206ENST00000511774 MEGF6O75095 1541 aa27.18■■□□□ 1.94
HMGCS1-206ENST00000511774 ATP10DQ9P241 1426 aa27.17■■□□□ 1.94
HMGCS1-206ENST00000511774 FBLN1P23142 703 aa27.17■■□□□ 1.94
HMGCS1-206ENST00000511774 MSL1Q68DK7 614 aa27.17■■□□□ 1.94
HMGCS1-206ENST00000511774 CCNL1Q9UK58 526 aaPredicted RBP27.16■■□□□ 1.94
HMGCS1-206ENST00000511774 HDGFL2Q7Z4V5 671 aaPredicted RBP27.15■■□□□ 1.94
HMGCS1-206ENST00000511774 GRIN3BO60391 1043 aa27.14■■□□□ 1.94
HMGCS1-206ENST00000511774 NEUROD1Q13562 356 aa27.14■■□□□ 1.94
HMGCS1-206ENST00000511774 MAP3K19Q56UN5 1328 aa27.13■■□□□ 1.93
HMGCS1-206ENST00000511774 C5P01031 1676 aa27.12■■□□□ 1.93
HMGCS1-206ENST00000511774 MSH5O43196 834 aa27.12■■□□□ 1.93
HMGCS1-206ENST00000511774 HOXC9P31274 260 aa27.11■■□□□ 1.93
HMGCS1-206ENST00000511774 ZCRB1Q8TBF4 217 aaKnown RBP27.11■■□□□ 1.93
HMGCS1-206ENST00000511774 TAF1LQ8IZX4 1826 aa27.11■■□□□ 1.93
HMGCS1-206ENST00000511774 ADCY9O60503 1353 aa27.09■■□□□ 1.93
HMGCS1-206ENST00000511774 TERF2IPQ9NYB0 399 aa27.07■■□□□ 1.92
HMGCS1-206ENST00000511774 CARD11Q9BXL7 1154 aa27.06■■□□□ 1.92
HMGCS1-206ENST00000511774 TOGARAM1Q9Y4F4 1720 aa27.06■■□□□ 1.92
HMGCS1-206ENST00000511774 USP47Q96K76 1375 aa27.06■■□□□ 1.92
HMGCS1-206ENST00000511774 AMIGO3Q86WK7 504 aa27.05■■□□□ 1.92
HMGCS1-206ENST00000511774 USHBP1Q8N6Y0 703 aa27.05■■□□□ 1.92
HMGCS1-206ENST00000511774 NBPF6Q5VWK0 638 aa27.04■■□□□ 1.92
HMGCS1-206ENST00000511774 NBPF4Q96M43 638 aa27.04■■□□□ 1.92
HMGCS1-206ENST00000511774 ZNF526Q8TF50 670 aaPredicted RBP27.03■■□□□ 1.92
HMGCS1-206ENST00000511774 CD2APQ9Y5K6 639 aa27.03■■□□□ 1.92
HMGCS1-206ENST00000511774 AMPHP49418 695 aa27.02■■□□□ 1.92
HMGCS1-206ENST00000511774 GPBP1L1Q9HC44 474 aaPredicted RBP27.02■■□□□ 1.92
HMGCS1-206ENST00000511774 SMIM5Q71RC9 77 aa27.01■■□□□ 1.91
HMGCS1-206ENST00000511774 HSPA6P17066 643 aa27■■□□□ 1.91
HMGCS1-206ENST00000511774 WWC3Q9ULE0 1092 aa27■■□□□ 1.91
HMGCS1-206ENST00000511774 RRS1Q15050 365 aaKnown RBP26.99■■□□□ 1.91
HMGCS1-206ENST00000511774 COG3Q96JB2 828 aa26.99■■□□□ 1.91
HMGCS1-206ENST00000511774 UBR3Q6ZT12 1888 aa26.99■■□□□ 1.91
HMGCS1-206ENST00000511774 C4BP0C0L5 1744 aa26.99■■□□□ 1.91
HMGCS1-206ENST00000511774 ITGB4P16144 1822 aa26.98■■□□□ 1.91
HMGCS1-206ENST00000511774 PUS7Q96PZ0 661 aaKnown RBP26.97■■□□□ 1.91
HMGCS1-206ENST00000511774 PALLDQ8WX93 1383 aa26.97■■□□□ 1.91
HMGCS1-206ENST00000511774 TESK2Q96S53 571 aa26.95■■□□□ 1.9
HMGCS1-206ENST00000511774 RTL1A6NKG5 1358 aa26.95■■□□□ 1.9
HMGCS1-206ENST00000511774 IGSF1Q8N6C5 1336 aa26.93■■□□□ 1.9
HMGCS1-206ENST00000511774 MAP2P11137 1827 aaKnown RBP26.92■■□□□ 1.9
HMGCS1-206ENST00000511774 CGNL1Q0VF96 1302 aa26.91■■□□□ 1.9
HMGCS1-206ENST00000511774 KIF3CO14782 793 aa26.91■■□□□ 1.9
HMGCS1-206ENST00000511774 CYP27B1O15528 508 aa26.91■■□□□ 1.9
HMGCS1-206ENST00000511774 MPRIPQ6WCQ1 1025 aa26.91■■□□□ 1.9
HMGCS1-206ENST00000511774 RAPGEF4Q8WZA2 1011 aa26.91■■□□□ 1.9
HMGCS1-206ENST00000511774 FLAD1Q8NFF5 587 aa26.9■■□□□ 1.9
HMGCS1-206ENST00000511774 FYB1O15117 783 aa26.88■■□□□ 1.89
HMGCS1-206ENST00000511774 PHF14O94880 888 aa26.88■■□□□ 1.89
HMGCS1-206ENST00000511774 TATP17735 454 aaPredicted RBP26.88■■□□□ 1.89
HMGCS1-206ENST00000511774 HSP90AB2PQ58FF8 381 aa26.88■■□□□ 1.89
HMGCS1-206ENST00000511774 GGNBP2Q9H3C7 697 aa26.88■■□□□ 1.89
HMGCS1-206ENST00000511774 PCDH11XQ9BZA7 1347 aa26.88■■□□□ 1.89
HMGCS1-206ENST00000511774 PCDH11YQ9BZA8 1340 aa26.88■■□□□ 1.89
HMGCS1-206ENST00000511774 PKD1L3Q7Z443 1732 aa26.87■■□□□ 1.89
HMGCS1-206ENST00000511774 CICQ96RK0 1608 aaPredicted RBP26.87■■□□□ 1.89
HMGCS1-206ENST00000511774 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.86■■□□□ 1.89
HMGCS1-206ENST00000511774 AK7Q96M32 723 aa26.86■■□□□ 1.89
HMGCS1-206ENST00000511774 KIAA1551Q9HCM1 1747 aa26.86■■□□□ 1.89
HMGCS1-206ENST00000511774 ST20-MTHFSA0A0A6YYL1 179 aa26.85■■□□□ 1.89
HMGCS1-206ENST00000511774 PIGBQ92521 554 aa26.84■■□□□ 1.89
HMGCS1-206ENST00000511774 INSRP06213 1382 aa26.84■■□□□ 1.89
HMGCS1-206ENST00000511774 SMG6Q86US8 1419 aaKnown RBP26.83■■□□□ 1.89
HMGCS1-206ENST00000511774 LINC00116Q8NCU8 138 aa26.83■■□□□ 1.89
HMGCS1-206ENST00000511774 N4BP2Q86UW6 1770 aaPredicted RBP26.81■■□□□ 1.88
HMGCS1-206ENST00000511774 KIF20BQ96Q89 1820 aa26.81■■□□□ 1.88
HMGCS1-206ENST00000511774 KIF13BQ9NQT8 1826 aa26.81■■□□□ 1.88
HMGCS1-206ENST00000511774 SMARCC1Q92922 1105 aaPredicted RBP26.79■■□□□ 1.88
HMGCS1-206ENST00000511774 SSFA2P28290 1259 aa26.78■■□□□ 1.88
HMGCS1-206ENST00000511774 ITPK1Q13572 414 aa26.78■■□□□ 1.88
HMGCS1-206ENST00000511774 FLT4P35916 1363 aa26.78■■□□□ 1.88
HMGCS1-206ENST00000511774 PXDNLA1KZ92 1463 aa26.78■■□□□ 1.88
HMGCS1-206ENST00000511774 NCAPD2Q15021 1401 aa26.77■■□□□ 1.88
HMGCS1-206ENST00000511774 LOC102724428A0A0B4J2F2 783 aa26.76■■□□□ 1.87
HMGCS1-206ENST00000511774 SIK1P57059 783 aa26.76■■□□□ 1.87
HMGCS1-206ENST00000511774 DNAJC5GQ8N7S2 189 aa26.76■■□□□ 1.87
HMGCS1-206ENST00000511774 NSD3Q9BZ95 1437 aa26.75■■□□□ 1.87
HMGCS1-206ENST00000511774 NKX1-1Q15270 411 aaPredicted RBP26.75■■□□□ 1.87
HMGCS1-206ENST00000511774 ASAP1Q9ULH1 1129 aa26.74■■□□□ 1.87
HMGCS1-206ENST00000511774 EMILIN1Q9Y6C2 1016 aa26.74■■□□□ 1.87
HMGCS1-206ENST00000511774 GNPATO15228 680 aa26.72■■□□□ 1.87
HMGCS1-206ENST00000511774 MMP10P09238 476 aa26.72■■□□□ 1.87
HMGCS1-206ENST00000511774 HMGB2P26583 209 aaKnown RBP26.72■■□□□ 1.87
HMGCS1-206ENST00000511774 TONSLQ96HA7 1378 aa26.71■■□□□ 1.87
HMGCS1-206ENST00000511774 APLP1P51693 650 aa26.71■■□□□ 1.87
HMGCS1-206ENST00000511774 KIF24Q5T7B8 1368 aa26.71■■□□□ 1.87
HMGCS1-206ENST00000511774 BRCA1P38398 1863 aaKnown RBP26.7■■□□□ 1.87
HMGCS1-206ENST00000511774 NMRK2Q9NPI5 230 aa26.69■■□□□ 1.86
HMGCS1-206ENST00000511774 ANKRD26Q9UPS8 1709 aa26.69■■□□□ 1.86
HMGCS1-206ENST00000511774 A0A0G2JLW4 131 aa26.68■■□□□ 1.86
HMGCS1-206ENST00000511774 C10orf71Q711Q0 1435 aa26.67■■□□□ 1.86
HMGCS1-206ENST00000511774 CARD14Q9BXL6 1004 aa26.67■■□□□ 1.86
HMGCS1-206ENST00000511774 WDR90Q96KV7 1748 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms