RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 JMYQ8N9B5 988 aa6.84□□□□□ -1.31
USP38-203ENST00000511739 FMNL2Q96PY5 1086 aa6.84□□□□□ -1.31
USP38-203ENST00000511739 SMC2O95347 1197 aa6.84□□□□□ -1.31
USP38-203ENST00000511739 ANAPC15P60006 121 aa6.84□□□□□ -1.31
USP38-203ENST00000511739 TXLNBQ8N3L3 684 aa6.84□□□□□ -1.31
USP38-203ENST00000511739 CCDC112Q8NEF3 446 aa6.84□□□□□ -1.31
USP38-203ENST00000511739 RUNDC1Q96C34 613 aa6.84□□□□□ -1.31
USP38-203ENST00000511739 NOL7Q9UMY1 257 aaKnown RBP6.84□□□□□ -1.31
USP38-203ENST00000511739 RALGAPBQ86X10 1494 aa6.84□□□□□ -1.31
USP38-203ENST00000511739 ZPR1O75312 459 aa6.84□□□□□ -1.31
USP38-203ENST00000511739 ADGRL1O94910 1474 aa6.84□□□□□ -1.31
USP38-203ENST00000511739 GBP2P32456 591 aaPredicted RBP6.84□□□□□ -1.32
USP38-203ENST00000511739 IGHMBP2P38935 993 aaKnown RBP6.84□□□□□ -1.32
USP38-203ENST00000511739 C16orf71Q8IYS4 520 aaPredicted RBP6.84□□□□□ -1.32
USP38-203ENST00000511739 ZNF396Q96N95 335 aaPredicted RBP6.84□□□□□ -1.32
USP38-203ENST00000511739 LNPKQ9C0E8 428 aa6.84□□□□□ -1.32
USP38-203ENST00000511739 NBPF1Q3BBV0 1214 aa6.83□□□□□ -1.32
USP38-203ENST00000511739 GCC2Q8IWJ2 1684 aa6.83□□□□□ -1.32
USP38-203ENST00000511739 PLCD4Q9BRC7 762 aa6.83□□□□□ -1.32
USP38-203ENST00000511739 FANCIQ9NVI1 1328 aa6.83□□□□□ -1.32
USP38-203ENST00000511739 GOLGA6L10A6NI86 522 aa6.83□□□□□ -1.32
USP38-203ENST00000511739 TDO2P48775 406 aa6.83□□□□□ -1.32
USP38-203ENST00000511739 CETN2P41208 172 aa6.83□□□□□ -1.32
USP38-203ENST00000511739 TSPYL1Q9H0U9 437 aa6.83□□□□□ -1.32
USP38-203ENST00000511739 UBAC1Q9BSL1 405 aa6.83□□□□□ -1.32
USP38-203ENST00000511739 LRP2BPQ9P2M1 347 aa6.83□□□□□ -1.32
USP38-203ENST00000511739 COMMD10Q9Y6G5 202 aa6.83□□□□□ -1.32
USP38-203ENST00000511739 AXDND1Q5T1B0 1012 aaPredicted RBP6.83□□□□□ -1.32
USP38-203ENST00000511739 TAX1BP1Q86VP1 789 aa6.83□□□□□ -1.32
USP38-203ENST00000511739 CABP2Q9NPB3 220 aa6.83□□□□□ -1.32
USP38-203ENST00000511739 ZNF652Q9Y2D9 606 aa6.83□□□□□ -1.32
USP38-203ENST00000511739 CD109Q6YHK3 1445 aa6.83□□□□□ -1.32
USP38-203ENST00000511739 CFAP70Q5T0N1 1121 aa6.82□□□□□ -1.32
USP38-203ENST00000511739 ANKLE2Q86XL3 938 aa6.82□□□□□ -1.32
USP38-203ENST00000511739 PDCP20941 246 aa6.82□□□□□ -1.32
USP38-203ENST00000511739 MTHFSP49914 203 aa6.82□□□□□ -1.32
USP38-203ENST00000511739 BCL11BQ9C0K0 894 aaPredicted RBP6.82□□□□□ -1.32
USP38-203ENST00000511739 ZNF287Q9HBT7 754 aa6.82□□□□□ -1.32
USP38-203ENST00000511739 MYL6BP14649 208 aa6.82□□□□□ -1.32
USP38-203ENST00000511739 CRBNQ96SW2 442 aa6.82□□□□□ -1.32
USP38-203ENST00000511739 ZNF219Q9P2Y4 722 aaPredicted RBP6.82□□□□□ -1.32
USP38-203ENST00000511739 PPP6R1Q9UPN7 881 aa6.82□□□□□ -1.32
USP38-203ENST00000511739 DHX29Q7Z478 1369 aaKnown RBP6.82□□□□□ -1.32
USP38-203ENST00000511739 FANCAO15360 1455 aa6.82□□□□□ -1.32
USP38-203ENST00000511739 PPP2R1AP30153 589 aa6.82□□□□□ -1.32
USP38-203ENST00000511739 HSP90AA2PQ14568 343 aaPredicted RBP6.82□□□□□ -1.32
USP38-203ENST00000511739 ZNF530Q6P9A1 599 aaPredicted RBP6.82□□□□□ -1.32
USP38-203ENST00000511739 RTEL1-TNFRSF6BF6WH68 1400 aa6.82□□□□□ -1.32
USP38-203ENST00000511739 PABPN1LA6NDY0 278 aaKnown RBP6.82□□□□□ -1.32
USP38-203ENST00000511739 CT47B1P0C2W7 299 aaPredicted RBP6.82□□□□□ -1.32
USP38-203ENST00000511739 FKBP4Q02790 459 aaKnown RBP eCLIP6.82□□□□□ -1.32
USP38-203ENST00000511739 EPB41L2O43491 1005 aaKnown RBP6.81□□□□□ -1.32
USP38-203ENST00000511739 PPP1R12BO60237 982 aaPredicted RBP6.81□□□□□ -1.32
USP38-203ENST00000511739 MAP3K9P80192 1104 aa6.81□□□□□ -1.32
USP38-203ENST00000511739 SIL1Q9H173 461 aa6.81□□□□□ -1.32
USP38-203ENST00000511739 DACH1Q9UI36 760 aa6.81□□□□□ -1.32
USP38-203ENST00000511739 EIF2AK4Q9P2K8 1649 aaKnown RBP6.81□□□□□ -1.32
USP38-203ENST00000511739 FAM135AQ9P2D6 1515 aa6.81□□□□□ -1.32
USP38-203ENST00000511739 POLR3DP05423 398 aaPredicted RBP6.81□□□□□ -1.32
USP38-203ENST00000511739 HDGFL1Q5TGJ6 251 aa6.81□□□□□ -1.32
USP38-203ENST00000511739 PPFIBP1Q86W92 1011 aa6.81□□□□□ -1.32
USP38-203ENST00000511739 VTI1AQ96AJ9 217 aa6.81□□□□□ -1.32
USP38-203ENST00000511739 STARD3NLO95772 234 aa6.81□□□□□ -1.32
USP38-203ENST00000511739 CEBPZQ03701 1054 aaKnown RBP6.81□□□□□ -1.32
USP38-203ENST00000511739 TRIM5Q9C035 493 aa6.81□□□□□ -1.32
USP38-203ENST00000511739 ABCC2Q92887 1545 aa6.81□□□□□ -1.32
USP38-203ENST00000511739 CDC45O75419 566 aa6.81□□□□□ -1.32
USP38-203ENST00000511739 PIBF1Q8WXW3 757 aa6.81□□□□□ -1.32
USP38-203ENST00000511739 ZNF428Q96B54 188 aa6.81□□□□□ -1.32
USP38-203ENST00000511739 HOMER2Q9NSB8 354 aa6.81□□□□□ -1.32
USP38-203ENST00000511739 FAM13BQ9NYF5 915 aa6.81□□□□□ -1.32
USP38-203ENST00000511739 CCP110O43303 1012 aa6.81□□□□□ -1.32
USP38-203ENST00000511739 NGLY1Q96IV0 654 aa6.81□□□□□ -1.32
USP38-203ENST00000511739 CEP126Q9P2H0 1117 aa6.81□□□□□ -1.32
USP38-203ENST00000511739 ABCF2Q9UG63 623 aa6.81□□□□□ -1.32
USP38-203ENST00000511739 CLEC11AQ9Y240 323 aa6.81□□□□□ -1.32
USP38-203ENST00000511739 RABEP1Q15276 862 aa6.8□□□□□ -1.32
USP38-203ENST00000511739 ADGBQ8N7X0 1667 aa6.8□□□□□ -1.32
USP38-203ENST00000511739 GOLGA6L7A0A1B0GV03 622 aa6.8□□□□□ -1.32
USP38-203ENST00000511739 SERPINC1P01008 464 aa6.8□□□□□ -1.32
USP38-203ENST00000511739 PSMD1Q99460 953 aa6.8□□□□□ -1.32
USP38-203ENST00000511739 ANKIB1Q9P2G1 1089 aa6.8□□□□□ -1.32
USP38-203ENST00000511739 SCAF11Q99590 1463 aaKnown RBP6.8□□□□□ -1.32
USP38-203ENST00000511739 CCDC150Q8NCX0 1101 aa6.8□□□□□ -1.32
USP38-203ENST00000511739 SEC63Q9UGP8 760 aaKnown RBP6.8□□□□□ -1.32
USP38-203ENST00000511739 ATAD2Q6PL18 1390 aa6.8□□□□□ -1.32
USP38-203ENST00000511739 ADAMTS2O95450 1211 aa6.8□□□□□ -1.32
USP38-203ENST00000511739 ZNF710Q8N1W2 664 aa6.8□□□□□ -1.32
USP38-203ENST00000511739 JAKMIP3Q5VZ66 844 aa6.79□□□□□ -1.32
USP38-203ENST00000511739 TMEM132EQ6IEE7 984 aa6.79□□□□□ -1.32
USP38-203ENST00000511739 RPGRQ92834 1020 aaKnown RBP6.79□□□□□ -1.32
USP38-203ENST00000511739 CUL5Q93034 780 aa6.79□□□□□ -1.32
USP38-203ENST00000511739 SYCP2Q9BX26 1530 aa6.79□□□□□ -1.32
USP38-203ENST00000511739 CDKL5O76039 1030 aa6.79□□□□□ -1.32
USP38-203ENST00000511739 CAVIN4Q5BKX8 364 aa6.79□□□□□ -1.32
USP38-203ENST00000511739 EXOC6Q8TAG9 804 aa6.79□□□□□ -1.32
USP38-203ENST00000511739 FEZ1Q99689 392 aa6.79□□□□□ -1.32
USP38-203ENST00000511739 GNAI2P04899 355 aa6.79□□□□□ -1.32
USP38-203ENST00000511739 MKNK2Q9HBH9 465 aa6.79□□□□□ -1.32
USP38-203ENST00000511739 ADAMTS8Q9UP79 889 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms