RNA–Protein interactions for RNA: ENST00000509927.1

FAT1-209, Transcript of FAT atypical cadherin 1, humanhuman

TSL 1 (best)

Gene FAT1, Length 357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAT1-209ENST00000509927 NUDCQ9Y266 331 aa9.9□□□□□ -0.82
FAT1-209ENST00000509927 OVOS2A0A0G2JMS6 1433 aa9.9□□□□□ -0.83
FAT1-209ENST00000509927 UPF1Q92900 1129 aaKnown RBP eCLIP9.89□□□□□ -0.83
FAT1-209ENST00000509927 SPG7Q9UQ90 795 aa9.89□□□□□ -0.83
FAT1-209ENST00000509927 KAT6BQ8WYB5 2073 aa9.89□□□□□ -0.83
FAT1-209ENST00000509927 SF3B2Q13435 895 aaKnown RBP9.88□□□□□ -0.83
FAT1-209ENST00000509927 CNGB1Q14028 1251 aaPredicted RBP9.88□□□□□ -0.83
FAT1-209ENST00000509927 AMOTQ4VCS5 1084 aa9.88□□□□□ -0.83
FAT1-209ENST00000509927 MARCH10Q8NA82 808 aaPredicted RBP9.88□□□□□ -0.83
FAT1-209ENST00000509927 PRKRIP1Q9H875 184 aaPredicted RBP9.88□□□□□ -0.83
FAT1-209ENST00000509927 LRRC37A3O60309 1634 aa9.88□□□□□ -0.83
FAT1-209ENST00000509927 TNS2Q63HR2 1409 aa9.88□□□□□ -0.83
FAT1-209ENST00000509927 KDRP35968 1356 aa9.88□□□□□ -0.83
FAT1-209ENST00000509927 RGPD1P0DJD0 1748 aa9.87□□□□□ -0.83
FAT1-209ENST00000509927 MYBBP1AQ9BQG0 1328 aaKnown RBP9.87□□□□□ -0.83
FAT1-209ENST00000509927 SBF2Q86WG5 1849 aa9.87□□□□□ -0.83
FAT1-209ENST00000509927 PLEKHO1Q53GL0 409 aaPredicted RBP9.87□□□□□ -0.83
FAT1-209ENST00000509927 PNNQ9H307 717 aaKnown RBP9.87□□□□□ -0.83
FAT1-209ENST00000509927 PCDH11XQ9BZA7 1347 aa9.86□□□□□ -0.83
FAT1-209ENST00000509927 PCDH11YQ9BZA8 1340 aa9.86□□□□□ -0.83
FAT1-209ENST00000509927 FCHSD2O94868 740 aa9.86□□□□□ -0.83
FAT1-209ENST00000509927 SULT6B1Q6IMI4 303 aa9.86□□□□□ -0.83
FAT1-209ENST00000509927 USHBP1Q8N6Y0 703 aa9.86□□□□□ -0.83
FAT1-209ENST00000509927 PKD1L3Q7Z443 1732 aa9.85□□□□□ -0.83
FAT1-209ENST00000509927 HMGB2P26583 209 aaKnown RBP9.85□□□□□ -0.83
FAT1-209ENST00000509927 NKX1-1Q15270 411 aaPredicted RBP9.85□□□□□ -0.83
FAT1-209ENST00000509927 IFNL2Q8IZJ0 200 aa9.85□□□□□ -0.83
FAT1-209ENST00000509927 DDX54Q8TDD1 881 aaKnown RBP9.85□□□□□ -0.83
FAT1-209ENST00000509927 BCL11BQ9C0K0 894 aaPredicted RBP9.85□□□□□ -0.83
FAT1-209ENST00000509927 RTN4Q9NQC3 1192 aaKnown RBP9.85□□□□□ -0.83
FAT1-209ENST00000509927 COL3A1P02461 1466 aaPredicted RBP9.85□□□□□ -0.83
FAT1-209ENST00000509927 MEGF6O75095 1541 aa9.84□□□□□ -0.83
FAT1-209ENST00000509927 PLSCR1O15162 318 aa9.84□□□□□ -0.83
FAT1-209ENST00000509927 ANP32CO43423 234 aa9.84□□□□□ -0.83
FAT1-209ENST00000509927 HSP90AB1P08238 724 aaKnown RBP9.84□□□□□ -0.83
FAT1-209ENST00000509927 SHANK3Q9BYB0 1731 aa9.83□□□□□ -0.84
FAT1-209ENST00000509927 U2SURPO15042 1029 aaKnown RBP9.83□□□□□ -0.84
FAT1-209ENST00000509927 BAG6P46379 1132 aa9.83□□□□□ -0.84
FAT1-209ENST00000509927 FAM182BQ5T319 152 aa9.83□□□□□ -0.84
FAT1-209ENST00000509927 CYP27B1O15528 508 aa9.82□□□□□ -0.84
FAT1-209ENST00000509927 TRIM37O94972 964 aa9.82□□□□□ -0.84
FAT1-209ENST00000509927 NEFMP07197 916 aa9.82□□□□□ -0.84
FAT1-209ENST00000509927 U2AF1L5P0DN76 240 aaPredicted RBP9.82□□□□□ -0.84
FAT1-209ENST00000509927 U2AF1Q01081 240 aaKnown RBP eCLIP9.82□□□□□ -0.84
FAT1-209ENST00000509927 ERVV-2B6SEH9 535 aa9.81□□□□□ -0.84
FAT1-209ENST00000509927 APBA3O96018 575 aa9.81□□□□□ -0.84
FAT1-209ENST00000509927 HMOX1P09601 288 aa9.81□□□□□ -0.84
FAT1-209ENST00000509927 PHKG2P15735 406 aa9.81□□□□□ -0.84
FAT1-209ENST00000509927 AKAP4Q5JQC9 854 aa9.81□□□□□ -0.84
FAT1-209ENST00000509927 C1orf141Q5JVX7 400 aa9.81□□□□□ -0.84
FAT1-209ENST00000509927 DCAF5Q96JK2 942 aa9.81□□□□□ -0.84
FAT1-209ENST00000509927 EP400Q96L91 3159 aa9.8□□□□□ -0.84
FAT1-209ENST00000509927 AEBP1Q8IUX7 1158 aa9.8□□□□□ -0.84
FAT1-209ENST00000509927 GAS2L2Q8NHY3 880 aa9.8□□□□□ -0.84
FAT1-209ENST00000509927 RGPD3A6NKT7 1758 aaPredicted RBP9.8□□□□□ -0.84
FAT1-209ENST00000509927 RGPD4Q7Z3J3 1758 aa9.8□□□□□ -0.84
FAT1-209ENST00000509927 NHSQ6T4R5 1651 aa9.8□□□□□ -0.84
FAT1-209ENST00000509927 TNS1Q9HBL0 1735 aaKnown RBP9.79□□□□□ -0.84
FAT1-209ENST00000509927 HTATSF1O43719 755 aaKnown RBP9.79□□□□□ -0.84
FAT1-209ENST00000509927 ZNF530Q6P9A1 599 aaPredicted RBP9.79□□□□□ -0.84
FAT1-209ENST00000509927 RSPH6AQ9H0K4 717 aa9.79□□□□□ -0.84
FAT1-209ENST00000509927 ITGB4P16144 1822 aa9.79□□□□□ -0.84
FAT1-209ENST00000509927 PRKAR2BP31323 418 aa9.78□□□□□ -0.84
FAT1-209ENST00000509927 PRIM1P49642 420 aaKnown RBP9.78□□□□□ -0.84
FAT1-209ENST00000509927 WDR43Q15061 677 aaKnown RBP eCLIP9.78□□□□□ -0.84
FAT1-209ENST00000509927 CAMKK2Q96RR4 588 aa9.78□□□□□ -0.84
FAT1-209ENST00000509927 VIRMAQ69YN4 1812 aaKnown RBP9.77□□□□□ -0.84
FAT1-209ENST00000509927 GNAT3A8MTJ3 354 aa9.77□□□□□ -0.85
FAT1-209ENST00000509927 KCNQ2O43526 872 aa9.77□□□□□ -0.85
FAT1-209ENST00000509927 MTHFSDQ2M296 383 aaKnown RBP9.77□□□□□ -0.85
FAT1-209ENST00000509927 SMARCC1Q92922 1105 aaPredicted RBP9.77□□□□□ -0.85
FAT1-209ENST00000509927 ACSBG1Q96GR2 724 aa9.77□□□□□ -0.85
FAT1-209ENST00000509927 PLEKHF1Q96S99 279 aa9.77□□□□□ -0.85
FAT1-209ENST00000509927 SCN11AQ9UI33 1791 aa9.77□□□□□ -0.85
FAT1-209ENST00000509927 BTAF1O14981 1849 aa9.77□□□□□ -0.85
FAT1-209ENST00000509927 DOT1LQ8TEK3 1739 aa9.76□□□□□ -0.85
FAT1-209ENST00000509927 EN1Q05925 392 aaPredicted RBP9.76□□□□□ -0.85
FAT1-209ENST00000509927 SLC27A3Q5K4L6 730 aa9.76□□□□□ -0.85
FAT1-209ENST00000509927 SYTL4Q96C24 671 aaPredicted RBP9.76□□□□□ -0.85
FAT1-209ENST00000509927 PHACTR3Q96KR7 559 aa9.76□□□□□ -0.85
FAT1-209ENST00000509927 TMOD3Q9NYL9 352 aa9.76□□□□□ -0.85
FAT1-209ENST00000509927 CABP4P57796 275 aa9.75□□□□□ -0.85
FAT1-209ENST00000509927 MPRIPQ6WCQ1 1025 aa9.75□□□□□ -0.85
FAT1-209ENST00000509927 DEFB132Q7Z7B7 95 aa9.75□□□□□ -0.85
FAT1-209ENST00000509927 RTF1Q92541 710 aaKnown RBP9.75□□□□□ -0.85
FAT1-209ENST00000509927 MAPK8IP3Q9UPT6 1336 aa9.75□□□□□ -0.85
FAT1-209ENST00000509927 ADAMTS7Q9UKP4 1686 aa9.74□□□□□ -0.85
FAT1-209ENST00000509927 RNMTO43148 476 aaKnown RBP9.74□□□□□ -0.85
FAT1-209ENST00000509927 EZH2Q15910 746 aaKnown RBP9.74□□□□□ -0.85
FAT1-209ENST00000509927 NBPF14Q5TI25 921 aa9.74□□□□□ -0.85
FAT1-209ENST00000509927 PIGBQ92521 554 aa9.74□□□□□ -0.85
FAT1-209ENST00000509927 RUNDC1Q96C34 613 aa9.74□□□□□ -0.85
FAT1-209ENST00000509927 ADAMTS8Q9UP79 889 aa9.74□□□□□ -0.85
FAT1-209ENST00000509927 MAP3K5Q99683 1374 aa9.74□□□□□ -0.85
FAT1-209ENST00000509927 LY75O60449 1722 aa9.73□□□□□ -0.85
FAT1-209ENST00000509927 NFE2L2Q16236 605 aa9.73□□□□□ -0.85
FAT1-209ENST00000509927 TXNRD1Q16881 649 aa9.73□□□□□ -0.85
FAT1-209ENST00000509927 PTF1AQ7RTS3 328 aa9.73□□□□□ -0.85
FAT1-209ENST00000509927 PROM2Q8N271 834 aa9.73□□□□□ -0.85
FAT1-209ENST00000509927 NFATC2IPQ8NCF5 419 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms