RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 ZBTB7AO95365 584 aa17.48■□□□□ 0.39
KDM3B-206ENST00000509468 TATP17735 454 aaPredicted RBP17.48■□□□□ 0.39
KDM3B-206ENST00000509468 CCER1Q8TC90 406 aaPredicted RBP17.48■□□□□ 0.39
KDM3B-206ENST00000509468 PDGFDQ9GZP0 370 aaPredicted RBP17.48■□□□□ 0.39
KDM3B-206ENST00000509468 FLT4P35916 1363 aa17.48■□□□□ 0.39
KDM3B-206ENST00000509468 EIF4G2P78344 907 aaKnown RBP eCLIP17.47■□□□□ 0.39
KDM3B-206ENST00000509468 ATF5Q9Y2D1 282 aaPredicted RBP17.47■□□□□ 0.39
KDM3B-206ENST00000509468 NSD3Q9BZ95 1437 aa17.47■□□□□ 0.39
KDM3B-206ENST00000509468 MYOM1P52179 1685 aa17.46■□□□□ 0.39
KDM3B-206ENST00000509468 POLR3GLQ9BT43 218 aa17.46■□□□□ 0.39
KDM3B-206ENST00000509468 MTFR1LQ9H019 292 aa17.46■□□□□ 0.39
KDM3B-206ENST00000509468 HMGB2P26583 209 aaKnown RBP17.45■□□□□ 0.38
KDM3B-206ENST00000509468 USHBP1Q8N6Y0 703 aa17.45■□□□□ 0.38
KDM3B-206ENST00000509468 MEGF6O75095 1541 aa17.44■□□□□ 0.38
KDM3B-206ENST00000509468 PPM1GO15355 546 aaPredicted RBP17.44■□□□□ 0.38
KDM3B-206ENST00000509468 PTGER2P43116 358 aa17.44■□□□□ 0.38
KDM3B-206ENST00000509468 LRRC4BQ9NT99 713 aa17.44■□□□□ 0.38
KDM3B-206ENST00000509468 MAP2P11137 1827 aaKnown RBP17.44■□□□□ 0.38
KDM3B-206ENST00000509468 SHANK3Q9BYB0 1731 aa17.43■□□□□ 0.38
KDM3B-206ENST00000509468 EMILIN1Q9Y6C2 1016 aa17.42■□□□□ 0.38
KDM3B-206ENST00000509468 WASHC2AQ641Q2 1341 aa17.42■□□□□ 0.38
KDM3B-206ENST00000509468 DOT1LQ8TEK3 1739 aa17.41■□□□□ 0.38
KDM3B-206ENST00000509468 SLC16A10Q8TF71 515 aa17.41■□□□□ 0.38
KDM3B-206ENST00000509468 AKT1S1Q96B36 256 aa17.41■□□□□ 0.38
KDM3B-206ENST00000509468 PCDH11XQ9BZA7 1347 aa17.41■□□□□ 0.38
KDM3B-206ENST00000509468 PCDH11YQ9BZA8 1340 aa17.41■□□□□ 0.38
KDM3B-206ENST00000509468 PAPPAQ13219 1627 aa17.4■□□□□ 0.38
KDM3B-206ENST00000509468 HSPA5P11021 654 aaKnown RBP17.4■□□□□ 0.38
KDM3B-206ENST00000509468 LY75O60449 1722 aa17.39■□□□□ 0.37
KDM3B-206ENST00000509468 ZNF827Q17R98 1081 aa17.39■□□□□ 0.37
KDM3B-206ENST00000509468 TFCP2L1Q9NZI6 479 aa17.39■□□□□ 0.37
KDM3B-206ENST00000509468 SPG7Q9UQ90 795 aa17.39■□□□□ 0.37
KDM3B-206ENST00000509468 SGIP1Q9BQI5 828 aa17.38■□□□□ 0.37
KDM3B-206ENST00000509468 PANK3Q9H999 370 aa17.38■□□□□ 0.37
KDM3B-206ENST00000509468 POLKQ9UBT6 870 aa17.38■□□□□ 0.37
KDM3B-206ENST00000509468 CCNL1Q9UK58 526 aaPredicted RBP17.38■□□□□ 0.37
KDM3B-206ENST00000509468 NSD2O96028 1365 aa17.38■□□□□ 0.37
KDM3B-206ENST00000509468 QSER1Q2KHR3 1735 aa17.38■□□□□ 0.37
KDM3B-206ENST00000509468 ARXQ96QS3 562 aa17.37■□□□□ 0.37
KDM3B-206ENST00000509468 SYT17Q9BSW7 474 aa17.37■□□□□ 0.37
KDM3B-206ENST00000509468 ANKRD26Q9UPS8 1709 aa17.36■□□□□ 0.37
KDM3B-206ENST00000509468 KCNQ4P56696 695 aa17.36■□□□□ 0.37
KDM3B-206ENST00000509468 MPRIPQ6WCQ1 1025 aa17.36■□□□□ 0.37
KDM3B-206ENST00000509468 FHDC1Q9C0D6 1143 aaPredicted RBP17.36■□□□□ 0.37
KDM3B-206ENST00000509468 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.36■□□□□ 0.375e-6■■■■□ 22.9
KDM3B-206ENST00000509468 CYP27B1O15528 508 aa17.35■□□□□ 0.37
KDM3B-206ENST00000509468 YY1P25490 414 aa17.35■□□□□ 0.37
KDM3B-206ENST00000509468 EYA1Q99502 592 aa17.35■□□□□ 0.37
KDM3B-206ENST00000509468 POLD1P28340 1107 aa17.34■□□□□ 0.37
KDM3B-206ENST00000509468 TNNT2P45379 298 aaPredicted RBP17.34■□□□□ 0.37
KDM3B-206ENST00000509468 NKX1-1Q15270 411 aaPredicted RBP17.34■□□□□ 0.37
KDM3B-206ENST00000509468 SMARCC1Q92922 1105 aaPredicted RBP17.34■□□□□ 0.37
KDM3B-206ENST00000509468 PNPLA7Q6ZV29 1317 aa17.33■□□□□ 0.36
KDM3B-206ENST00000509468 NCAPD2Q15021 1401 aa17.32■□□□□ 0.36
KDM3B-206ENST00000509468 ITGB4P16144 1822 aa17.32■□□□□ 0.36
KDM3B-206ENST00000509468 PKD1L3Q7Z443 1732 aa17.32■□□□□ 0.36
KDM3B-206ENST00000509468 EIF4A2Q14240 407 aaKnown RBP17.31■□□□□ 0.36
KDM3B-206ENST00000509468 IFNL2Q8IZJ0 200 aa17.31■□□□□ 0.36
KDM3B-206ENST00000509468 MSH5O43196 834 aa17.3■□□□□ 0.36
KDM3B-206ENST00000509468 MORC1Q86VD1 984 aa17.3■□□□□ 0.36
KDM3B-206ENST00000509468 FLAD1Q8NFF5 587 aa17.3■□□□□ 0.36
KDM3B-206ENST00000509468 KNSTRNQ9Y448 316 aa17.3■□□□□ 0.36
KDM3B-206ENST00000509468 PALLDQ8WX93 1383 aa17.28■□□□□ 0.36
KDM3B-206ENST00000509468 MAP3K5Q99683 1374 aa17.28■□□□□ 0.36
KDM3B-206ENST00000509468 TUBGCP6Q96RT7 1819 aa17.28■□□□□ 0.36
KDM3B-206ENST00000509468 COL24A1Q17RW2 1714 aa17.28■□□□□ 0.36
KDM3B-206ENST00000509468 COL23A1Q86Y22 540 aaPredicted RBP17.28■□□□□ 0.36
KDM3B-206ENST00000509468 PIGBQ92521 554 aa17.28■□□□□ 0.36
KDM3B-206ENST00000509468 TMOD3Q9NYL9 352 aa17.28■□□□□ 0.36
KDM3B-206ENST00000509468 PLEKHG2Q9H7P9 1386 aa17.28■□□□□ 0.36
KDM3B-206ENST00000509468 C5P01031 1676 aa17.27■□□□□ 0.36
KDM3B-206ENST00000509468 PHKG2P15735 406 aa17.27■□□□□ 0.36
KDM3B-206ENST00000509468 TAF1LQ8IZX4 1826 aa17.26■□□□□ 0.35
KDM3B-206ENST00000509468 PLEKHO1Q53GL0 409 aaPredicted RBP17.26■□□□□ 0.35
KDM3B-206ENST00000509468 TOGARAM1Q9Y4F4 1720 aa17.25■□□□□ 0.35
KDM3B-206ENST00000509468 HSP90AB1P08238 724 aaKnown RBP17.25■□□□□ 0.35
KDM3B-206ENST00000509468 IGSF1Q8N6C5 1336 aa17.24■□□□□ 0.35
KDM3B-206ENST00000509468 AMOTQ4VCS5 1084 aa17.24■□□□□ 0.35
KDM3B-206ENST00000509468 KLHL34Q8N239 644 aa17.24■□□□□ 0.35
KDM3B-206ENST00000509468 ERVV-2B6SEH9 535 aa17.23■□□□□ 0.35
KDM3B-206ENST00000509468 GPR162Q16538 588 aa17.23■□□□□ 0.35
KDM3B-206ENST00000509468 AK7Q96M32 723 aa17.23■□□□□ 0.35
KDM3B-206ENST00000509468 CHD4Q14839 1912 aa17.22■□□□□ 0.35
KDM3B-206ENST00000509468 LOC102724428A0A0B4J2F2 783 aa17.22■□□□□ 0.35
KDM3B-206ENST00000509468 SIK1P57059 783 aa17.22■□□□□ 0.35
KDM3B-206ENST00000509468 DCAF5Q96JK2 942 aa17.22■□□□□ 0.35
KDM3B-206ENST00000509468 ASAP1Q9ULH1 1129 aa17.21■□□□□ 0.35
KDM3B-206ENST00000509468 C4BP0C0L5 1744 aa17.21■□□□□ 0.35
KDM3B-206ENST00000509468 ATP6V1AP38606 617 aa17.2■□□□□ 0.34
KDM3B-206ENST00000509468 ATG3Q9NT62 314 aa17.2■□□□□ 0.34
KDM3B-206ENST00000509468 KIF7Q2M1P5 1343 aa17.2■□□□□ 0.34
KDM3B-206ENST00000509468 AMER1Q5JTC6 1135 aaPredicted RBP17.19■□□□□ 0.34
KDM3B-206ENST00000509468 SSFA2P28290 1259 aa17.18■□□□□ 0.34
KDM3B-206ENST00000509468 MTHFSP49914 203 aa17.18■□□□□ 0.34
KDM3B-206ENST00000509468 C1orf141Q5JVX7 400 aa17.18■□□□□ 0.34
KDM3B-206ENST00000509468 ZNF530Q6P9A1 599 aaPredicted RBP17.18■□□□□ 0.34
KDM3B-206ENST00000509468 CD2APQ9Y5K6 639 aa17.18■□□□□ 0.34
KDM3B-206ENST00000509468 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.17■□□□□ 0.34
KDM3B-206ENST00000509468 IL13P35225 146 aa17.17■□□□□ 0.34
KDM3B-206ENST00000509468 CABP4P57796 275 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms