RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 ATP5J2-PTCD1G3V325 749 aa10.06□□□□□ -0.8
GYPA-205ENST00000508337 ERVK-9P63128 1117 aa10.06□□□□□ -0.8
GYPA-205ENST00000508337 UCN2Q96RP3 112 aa10.06□□□□□ -0.8
GYPA-205ENST00000508337 PPP1R12CQ9BZL4 782 aa10.06□□□□□ -0.8
GYPA-205ENST00000508337 AAASQ9NRG9 546 aa10.06□□□□□ -0.8
GYPA-205ENST00000508337 TFIP11Q9UBB9 837 aaKnown RBP10.06□□□□□ -0.8
GYPA-205ENST00000508337 LMOD1P29536 600 aaPredicted RBP10.05□□□□□ -0.8
GYPA-205ENST00000508337 MRPL14Q6P1L8 145 aaKnown RBP10.05□□□□□ -0.8
GYPA-205ENST00000508337 TRIM50Q86XT4 487 aa10.05□□□□□ -0.8
GYPA-205ENST00000508337 LINC00528Q8N1L1 170 aa10.05□□□□□ -0.8
GYPA-205ENST00000508337 PHTF2Q8N3S3 785 aa10.05□□□□□ -0.8
GYPA-205ENST00000508337 CDCA7Q9BWT1 371 aaPredicted RBP10.05□□□□□ -0.8
GYPA-205ENST00000508337 SCTRP47872 440 aa10.04□□□□□ -0.8
GYPA-205ENST00000508337 CCDC82Q8N4S0 544 aa10.04□□□□□ -0.8
GYPA-205ENST00000508337 AGBL1Q96MI9 1066 aa10.04□□□□□ -0.8
GYPA-205ENST00000508337 ARID3AQ99856 593 aa10.04□□□□□ -0.8
GYPA-205ENST00000508337 RFX1P22670 979 aa10.03□□□□□ -0.8
GYPA-205ENST00000508337 ATP1A2P50993 1020 aa10.03□□□□□ -0.8
GYPA-205ENST00000508337 PURBQ96QR8 312 aaKnown RBP10.03□□□□□ -0.8
GYPA-205ENST00000508337 KLF16Q9BXK1 252 aaPredicted RBP10.03□□□□□ -0.8
GYPA-205ENST00000508337 SENP2Q9HC62 589 aa10.03□□□□□ -0.8
GYPA-205ENST00000508337 ATP13A2Q9NQ11 1180 aa10.03□□□□□ -0.8
GYPA-205ENST00000508337 MAFBQ9Y5Q3 323 aaPredicted RBP10.03□□□□□ -0.8
GYPA-205ENST00000508337 MEN1O00255 615 aa10.02□□□□□ -0.81
GYPA-205ENST00000508337 LILRA1O75019 489 aa10.02□□□□□ -0.81
GYPA-205ENST00000508337 PLEKHM2Q8IWE5 1019 aa10.02□□□□□ -0.81
GYPA-205ENST00000508337 NLRP3Q96P20 1036 aa10.02□□□□□ -0.81
GYPA-205ENST00000508337 POLMQ9NP87 494 aaPredicted RBP10.02□□□□□ -0.81
GYPA-205ENST00000508337 GTF2E1P29083 439 aaPredicted RBP10.01□□□□□ -0.81
GYPA-205ENST00000508337 GTF2IP78347 998 aa10.01□□□□□ -0.81
GYPA-205ENST00000508337 TSGA10IPQ3SY00 556 aa10.01□□□□□ -0.81
GYPA-205ENST00000508337 ESCO1Q5FWF5 840 aa10.01□□□□□ -0.81
GYPA-205ENST00000508337 Q6ZVU0 165 aa10.01□□□□□ -0.81
GYPA-205ENST00000508337 LARP1Q6PKG0 1096 aaKnown RBP10□□□□□ -0.81
GYPA-205ENST00000508337 KIFC2Q96AC6 838 aa10□□□□□ -0.81
GYPA-205ENST00000508337 ZNF395Q9H8N7 513 aaPredicted RBP10□□□□□ -0.81
GYPA-205ENST00000508337 ARHGEF10LQ9HCE6 1279 aa10□□□□□ -0.81
GYPA-205ENST00000508337 CHIC2Q9UKJ5 165 aa10□□□□□ -0.81
GYPA-205ENST00000508337 ADD1P35611 737 aaKnown RBP9.99□□□□□ -0.81
GYPA-205ENST00000508337 PTGIRP43119 386 aa9.99□□□□□ -0.81
GYPA-205ENST00000508337 OSBPL3Q9H4L5 887 aa9.99□□□□□ -0.81
GYPA-205ENST00000508337 VRTNQ9H8Y1 702 aa9.99□□□□□ -0.81
GYPA-205ENST00000508337 RAB6BQ9NRW1 208 aa9.99□□□□□ -0.81
GYPA-205ENST00000508337 MKRN1Q9UHC7 482 aaKnown RBP9.99□□□□□ -0.81
GYPA-205ENST00000508337 GNRH1P01148 92 aa9.98□□□□□ -0.81
GYPA-205ENST00000508337 RASA1P20936 1047 aa9.97□□□□□ -0.81
GYPA-205ENST00000508337 TRIM46Q7Z4K8 759 aa9.97□□□□□ -0.81
GYPA-205ENST00000508337 ZFP42Q96MM3 310 aa9.97□□□□□ -0.81
GYPA-205ENST00000508337 DNAAF2Q9NVR5 837 aaKnown RBP9.97□□□□□ -0.81
GYPA-205ENST00000508337 MAN1A2O60476 641 aa9.96□□□□□ -0.82
GYPA-205ENST00000508337 SLC27A3Q5K4L6 730 aa9.96□□□□□ -0.82
GYPA-205ENST00000508337 ZNF594Q96JF6 807 aaPredicted RBP9.96□□□□□ -0.82
GYPA-205ENST00000508337 INSM2Q96T92 566 aaPredicted RBP9.96□□□□□ -0.82
GYPA-205ENST00000508337 DACH1Q9UI36 760 aa9.96□□□□□ -0.82
GYPA-205ENST00000508337 C11orf95C9JLR9 678 aaPredicted RBP9.95□□□□□ -0.82
GYPA-205ENST00000508337 GDF10P55107 478 aa9.95□□□□□ -0.82
GYPA-205ENST00000508337 OGFOD1Q8N543 542 aa9.95□□□□□ -0.82
GYPA-205ENST00000508337 GMPR2Q9P2T1 348 aaKnown RBP9.95□□□□□ -0.82
GYPA-205ENST00000508337 A0A1W2PRU2 124 aa9.94□□□□□ -0.82
GYPA-205ENST00000508337 TTLL8A6PVC2 850 aa9.94□□□□□ -0.82
GYPA-205ENST00000508337 SPINT1O43278 529 aa9.94□□□□□ -0.82
GYPA-205ENST00000508337 CFAP70Q5T0N1 1121 aa9.94□□□□□ -0.82
GYPA-205ENST00000508337 TPCN2Q8NHX9 752 aa9.94□□□□□ -0.82
GYPA-205ENST00000508337 CLN3Q13286 438 aa9.93□□□□□ -0.82
GYPA-205ENST00000508337 CDCA8Q53HL2 280 aa9.93□□□□□ -0.82
GYPA-205ENST00000508337 C1orf115Q9H7X2 142 aa9.93□□□□□ -0.82
GYPA-205ENST00000508337 TLR1Q15399 786 aa9.92□□□□□ -0.82
GYPA-205ENST00000508337 CNKSR1Q969H4 720 aa9.92□□□□□ -0.82
GYPA-205ENST00000508337 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.91□□□□□ -0.82
GYPA-205ENST00000508337 USP17L15C9J2P7 530 aa9.91□□□□□ -0.82
GYPA-205ENST00000508337 USP17L10C9JJH3 530 aa9.91□□□□□ -0.82
GYPA-205ENST00000508337 USP17L13C9JLJ4 530 aa9.91□□□□□ -0.82
GYPA-205ENST00000508337 USP17L12C9JPN9 530 aa9.91□□□□□ -0.82
GYPA-205ENST00000508337 USP17L11C9JVI0 530 aa9.91□□□□□ -0.82
GYPA-205ENST00000508337 USP17L21D6R901 530 aa9.91□□□□□ -0.82
GYPA-205ENST00000508337 USP17L18D6R9N7 530 aa9.91□□□□□ -0.82
GYPA-205ENST00000508337 USP17L22D6RA61 530 aa9.91□□□□□ -0.82
GYPA-205ENST00000508337 USP17L17D6RBQ6 530 aa9.91□□□□□ -0.82
GYPA-205ENST00000508337 USP17L19D6RCP7 530 aa9.91□□□□□ -0.82
GYPA-205ENST00000508337 USP17L20D6RJB6 530 aa9.91□□□□□ -0.82
GYPA-205ENST00000508337 BACH1O14867 736 aa9.91□□□□□ -0.82
GYPA-205ENST00000508337 USP17L24Q0WX57 530 aa9.91□□□□□ -0.82
GYPA-205ENST00000508337 CCDC102BQ68D86 513 aa9.91□□□□□ -0.82
GYPA-205ENST00000508337 LARGE2Q8N3Y3 721 aa9.91□□□□□ -0.82
GYPA-205ENST00000508337 PBXIP1Q96AQ6 731 aa9.91□□□□□ -0.82
GYPA-205ENST00000508337 TRIM47Q96LD4 638 aa9.91□□□□□ -0.82
GYPA-205ENST00000508337 SERTAD1Q9UHV2 236 aa9.91□□□□□ -0.82
GYPA-205ENST00000508337 FIGNL2A6NMB9 653 aa9.9□□□□□ -0.82
GYPA-205ENST00000508337 CTSOP43234 321 aaPredicted RBP9.9□□□□□ -0.82
GYPA-205ENST00000508337 ZNF787Q6DD87 383 aa9.9□□□□□ -0.82
GYPA-205ENST00000508337 TMEM214Q6NUQ4 689 aaKnown RBP9.9□□□□□ -0.82
GYPA-205ENST00000508337 ESYT1Q9BSJ8 1104 aa9.9□□□□□ -0.82
GYPA-205ENST00000508337 ETNK1Q9HBU6 452 aa9.9□□□□□ -0.82
GYPA-205ENST00000508337 FAM196BA6NMK8 535 aa9.89□□□□□ -0.83
GYPA-205ENST00000508337 GPC1P35052 558 aa9.89□□□□□ -0.83
GYPA-205ENST00000508337 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.89□□□□□ -0.83
GYPA-205ENST00000508337 GNASQ5JWF2 1037 aa9.89□□□□□ -0.83
GYPA-205ENST00000508337 ZSCAN10Q96SZ4 725 aaPredicted RBP9.89□□□□□ -0.83
GYPA-205ENST00000508337 PCDHGA11Q9Y5H2 935 aa9.89□□□□□ -0.83
GYPA-205ENST00000508337 INHAP05111 366 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms