RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 DIP2AQ14689 1571 aa27.61■■■□□ 2.01
SPCS3-203ENST00000507678 ARHGAP23Q9P227 1491 aa27.6■■■□□ 2.01
SPCS3-203ENST00000507678 SLIT1O75093 1534 aa27.6■■■□□ 2.01
SPCS3-203ENST00000507678 FER1L4A9Z1Z3 1794 aa27.6■■■□□ 2.01
SPCS3-203ENST00000507678 GCC1Q96CN9 775 aa27.6■■■□□ 2.01
SPCS3-203ENST00000507678 TSPYL4Q9UJ04 414 aa27.6■■■□□ 2.01
SPCS3-203ENST00000507678 ABTB2Q8N961 1025 aa27.59■■■□□ 2.01
SPCS3-203ENST00000507678 FLT4P35916 1363 aa27.59■■■□□ 2.01
SPCS3-203ENST00000507678 RIMS1Q86UR5 1692 aaKnown RBP27.58■■■□□ 2.01
SPCS3-203ENST00000507678 APBB1O00213 710 aa27.58■■■□□ 2.01
SPCS3-203ENST00000507678 SLC4A2P04920 1241 aa27.58■■■□□ 2.01
SPCS3-203ENST00000507678 ZBTB7CA1YPR0 619 aa27.57■■■□□ 2
SPCS3-203ENST00000507678 SBNO1A3KN83 1393 aa27.57■■■□□ 2
SPCS3-203ENST00000507678 SLC4A10Q6U841 1118 aa27.56■■■□□ 2
SPCS3-203ENST00000507678 NECTIN2Q92692 538 aa27.55■■■□□ 2
SPCS3-203ENST00000507678 ARHGEF10O15013 1369 aa27.54■■■□□ 2
SPCS3-203ENST00000507678 NALCNQ8IZF0 1738 aa27.54■■■□□ 2
SPCS3-203ENST00000507678 GSE1Q14687 1217 aa27.54■■■□□ 2
SPCS3-203ENST00000507678 USHBP1Q8N6Y0 703 aa27.54■■■□□ 2
SPCS3-203ENST00000507678 F6X3S4 739 aa27.53■■■□□ 2
SPCS3-203ENST00000507678 CRB1P82279 1406 aa27.52■■■□□ 2
SPCS3-203ENST00000507678 CEP170BQ9Y4F5 1589 aaPredicted RBP27.52■■■□□ 2
SPCS3-203ENST00000507678 G2E3Q7L622 706 aa27.52■■■□□ 2
SPCS3-203ENST00000507678 HAP1P54257 671 aaPredicted RBP27.51■■□□□ 1.99
SPCS3-203ENST00000507678 MEIS3Q99687 375 aa27.51■■□□□ 1.99
SPCS3-203ENST00000507678 MSH6P52701 1360 aa27.51■■□□□ 1.99
SPCS3-203ENST00000507678 INTS3Q68E01 1043 aaKnown RBP27.51■■□□□ 1.99
SPCS3-203ENST00000507678 HOXC9P31274 260 aa27.5■■□□□ 1.99
SPCS3-203ENST00000507678 BMP2KLQ5H9B9 411 aa27.5■■□□□ 1.99
SPCS3-203ENST00000507678 C16orf71Q8IYS4 520 aaPredicted RBP27.49■■□□□ 1.99
SPCS3-203ENST00000507678 IGSF1Q8N6C5 1336 aa27.49■■□□□ 1.99
SPCS3-203ENST00000507678 PIK3C2AO00443 1686 aa27.48■■□□□ 1.99
SPCS3-203ENST00000507678 RGPD1P0DJD0 1748 aa27.48■■□□□ 1.99
SPCS3-203ENST00000507678 GAS2L2Q8NHY3 880 aa27.48■■□□□ 1.99
SPCS3-203ENST00000507678 ANTXR1Q9H6X2 564 aa27.47■■□□□ 1.99
SPCS3-203ENST00000507678 KIAA0232Q92628 1395 aa27.47■■□□□ 1.99
SPCS3-203ENST00000507678 RGS12O14924 1447 aa27.47■■□□□ 1.99
SPCS3-203ENST00000507678 EIF5BO60841 1220 aaKnown RBP27.46■■□□□ 1.99
SPCS3-203ENST00000507678 SMARCA5O60264 1052 aaPredicted RBP27.46■■□□□ 1.99
SPCS3-203ENST00000507678 TBC1D9Q6ZT07 1266 aa27.45■■□□□ 1.99
SPCS3-203ENST00000507678 BRPF3Q9ULD4 1205 aa27.45■■□□□ 1.99
SPCS3-203ENST00000507678 FMN2Q9NZ56 1722 aa27.44■■□□□ 1.98
SPCS3-203ENST00000507678 OTUD7AQ8TE49 926 aaPredicted RBP27.44■■□□□ 1.98
SPCS3-203ENST00000507678 PHF8Q9UPP1 1060 aa27.44■■□□□ 1.98
SPCS3-203ENST00000507678 KDRP35968 1356 aa27.44■■□□□ 1.98
SPCS3-203ENST00000507678 PTPRCP08575 1304 aa27.44■■□□□ 1.98
SPCS3-203ENST00000507678 CEP85Q6P2H3 762 aa27.44■■□□□ 1.98
SPCS3-203ENST00000507678 HSCBQ8IWL3 235 aa27.44■■□□□ 1.98
SPCS3-203ENST00000507678 DCTPP1Q9H773 170 aa27.43■■□□□ 1.98
SPCS3-203ENST00000507678 GNAT3A8MTJ3 354 aa27.43■■□□□ 1.98
SPCS3-203ENST00000507678 ESCO1Q5FWF5 840 aa27.43■■□□□ 1.98
SPCS3-203ENST00000507678 ANKLE2Q86XL3 938 aa27.43■■□□□ 1.98
SPCS3-203ENST00000507678 ANKRD44Q8N8A2 993 aa27.43■■□□□ 1.98
SPCS3-203ENST00000507678 GSPT1P15170 499 aaKnown RBP27.41■■□□□ 1.98
SPCS3-203ENST00000507678 XPCQ01831 940 aaPredicted RBP27.41■■□□□ 1.98
SPCS3-203ENST00000507678 STK31Q9BXU1 1019 aa27.41■■□□□ 1.98
SPCS3-203ENST00000507678 XRN1Q8IZH2 1706 aaKnown RBP27.41■■□□□ 1.98
SPCS3-203ENST00000507678 PLEKHM2Q8IWE5 1019 aa27.41■■□□□ 1.98
SPCS3-203ENST00000507678 RTL1A6NKG5 1358 aa27.4■■□□□ 1.98
SPCS3-203ENST00000507678 PSME1Q06323 249 aa27.39■■□□□ 1.98
SPCS3-203ENST00000507678 IL17REQ8NFR9 667 aa27.39■■□□□ 1.97
SPCS3-203ENST00000507678 ATP10DQ9P241 1426 aa27.39■■□□□ 1.97
SPCS3-203ENST00000507678 ANKARQ7Z5J8 1434 aa27.38■■□□□ 1.97
SPCS3-203ENST00000507678 FKBP5Q13451 457 aaPredicted RBP27.38■■□□□ 1.97
SPCS3-203ENST00000507678 LMOD2Q6P5Q4 547 aa27.38■■□□□ 1.97
SPCS3-203ENST00000507678 KIF24Q5T7B8 1368 aa27.38■■□□□ 1.97
SPCS3-203ENST00000507678 RBM25P49756 843 aaKnown RBP27.37■■□□□ 1.97
SPCS3-203ENST00000507678 RPAP2Q8IXW5 612 aaPredicted RBP27.37■■□□□ 1.97
SPCS3-203ENST00000507678 SETD1BQ9UPS6 1966 aaKnown RBP27.37■■□□□ 1.97
SPCS3-203ENST00000507678 RBM42Q9BTD8 480 aaKnown RBP27.35■■□□□ 1.97
SPCS3-203ENST00000507678 FOXD4L1Q9NU39 408 aa27.35■■□□□ 1.97
SPCS3-203ENST00000507678 CDC45O75419 566 aa27.35■■□□□ 1.97
SPCS3-203ENST00000507678 FLIIQ13045 1269 aa27.34■■□□□ 1.97
SPCS3-203ENST00000507678 MAP3K5Q99683 1374 aa27.32■■□□□ 1.96
SPCS3-203ENST00000507678 HSP90AB1P08238 724 aaKnown RBP27.32■■□□□ 1.96
SPCS3-203ENST00000507678 TTC22Q5TAA0 569 aa27.32■■□□□ 1.96
SPCS3-203ENST00000507678 CCDC30Q5VVM6 783 aa27.32■■□□□ 1.96
SPCS3-203ENST00000507678 LRRC59Q96AG4 307 aaKnown RBP27.31■■□□□ 1.96
SPCS3-203ENST00000507678 CCT4P50991 539 aaKnown RBP27.31■■□□□ 1.96
SPCS3-203ENST00000507678 NBPF6Q5VWK0 638 aa27.31■■□□□ 1.96
SPCS3-203ENST00000507678 NBPF4Q96M43 638 aa27.31■■□□□ 1.96
SPCS3-203ENST00000507678 CD2BP2O95400 341 aaKnown RBP27.3■■□□□ 1.96
SPCS3-203ENST00000507678 TAF7Q15545 349 aaPredicted RBP27.3■■□□□ 1.96
SPCS3-203ENST00000507678 KIF2CQ99661 725 aa27.3■■□□□ 1.96
SPCS3-203ENST00000507678 EXOC6BQ9Y2D4 811 aa27.3■■□□□ 1.96
SPCS3-203ENST00000507678 EIF2S2P20042 333 aaKnown RBP27.29■■□□□ 1.96
SPCS3-203ENST00000507678 ARXQ96QS3 562 aa27.29■■□□□ 1.96
SPCS3-203ENST00000507678 ORAI2Q96SN7 254 aa27.29■■□□□ 1.96
SPCS3-203ENST00000507678 HSP90AA1P07900 732 aaKnown RBP27.29■■□□□ 1.96
SPCS3-203ENST00000507678 CHMP5Q9NZZ3 219 aa27.29■■□□□ 1.96
SPCS3-203ENST00000507678 HTATSF1O43719 755 aaKnown RBP27.28■■□□□ 1.96
SPCS3-203ENST00000507678 HMMRO75330 724 aa27.27■■□□□ 1.96
SPCS3-203ENST00000507678 TSHZ3Q63HK5 1081 aa27.27■■□□□ 1.96
SPCS3-203ENST00000507678 LGR6Q9HBX8 967 aa27.27■■□□□ 1.96
SPCS3-203ENST00000507678 NWD1Q149M9 1564 aa27.26■■□□□ 1.96
SPCS3-203ENST00000507678 GNAI2P04899 355 aa27.26■■□□□ 1.96
SPCS3-203ENST00000507678 IP6K1Q92551 441 aa27.26■■□□□ 1.96
SPCS3-203ENST00000507678 SDSP20132 328 aa27.26■■□□□ 1.95
SPCS3-203ENST00000507678 HDGFL1Q5TGJ6 251 aa27.26■■□□□ 1.95
SPCS3-203ENST00000507678 MARF1Q9Y4F3 1742 aaKnown RBP27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms