RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 ZCRB1Q8TBF4 217 aaKnown RBP26.16■■□□□ 1.78
LMNA-221ENST00000506981 DOT1LQ8TEK3 1739 aa26.15■■□□□ 1.78
LMNA-221ENST00000506981 DDX54Q8TDD1 881 aaKnown RBP26.15■■□□□ 1.78
LMNA-221ENST00000506981 RGPD3A6NKT7 1758 aaPredicted RBP26.14■■□□□ 1.78
LMNA-221ENST00000506981 RGPD4Q7Z3J3 1758 aa26.14■■□□□ 1.78
LMNA-221ENST00000506981 APBA3O96018 575 aa26.13■■□□□ 1.77
LMNA-221ENST00000506981 IGSF1Q8N6C5 1336 aa26.12■■□□□ 1.77
LMNA-221ENST00000506981 BTAF1O14981 1849 aa26.11■■□□□ 1.77
LMNA-221ENST00000506981 PCDH11XQ9BZA7 1347 aa26.11■■□□□ 1.77
LMNA-221ENST00000506981 PCDH11YQ9BZA8 1340 aa26.11■■□□□ 1.77
LMNA-221ENST00000506981 RREB1Q92766 1687 aa26.1■■□□□ 1.77
LMNA-221ENST00000506981 EN1Q05925 392 aaPredicted RBP26.09■■□□□ 1.77
LMNA-221ENST00000506981 DDX10Q13206 875 aaKnown RBP26.09■■□□□ 1.77
LMNA-221ENST00000506981 BCL11BQ9C0K0 894 aaPredicted RBP26.09■■□□□ 1.77
LMNA-221ENST00000506981 PARD3Q8TEW0 1356 aa26.08■■□□□ 1.77
LMNA-221ENST00000506981 ACSBG1Q96GR2 724 aa26.07■■□□□ 1.76
LMNA-221ENST00000506981 SPG7Q9UQ90 795 aa26.07■■□□□ 1.76
LMNA-221ENST00000506981 PLEKHG2Q9H7P9 1386 aa26.07■■□□□ 1.76
LMNA-221ENST00000506981 DIAPH1O60610 1272 aaKnown RBP26.06■■□□□ 1.76
LMNA-221ENST00000506981 IL13P35225 146 aa26.06■■□□□ 1.76
LMNA-221ENST00000506981 CFAP53Q96M91 514 aa26.06■■□□□ 1.76
LMNA-221ENST00000506981 NUP188Q5SRE5 1749 aa26.05■■□□□ 1.76
LMNA-221ENST00000506981 ITGB4P16144 1822 aa26.04■■□□□ 1.76
LMNA-221ENST00000506981 COL3A1P02461 1466 aaPredicted RBP26.04■■□□□ 1.76
LMNA-221ENST00000506981 EZH2Q15910 746 aaKnown RBP26.03■■□□□ 1.76
LMNA-221ENST00000506981 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.03■■□□□ 1.76
LMNA-221ENST00000506981 PPP2R1AP30153 589 aa26.02■■□□□ 1.76
LMNA-221ENST00000506981 SULT6B1Q6IMI4 303 aa26.02■■□□□ 1.76
LMNA-221ENST00000506981 CAMKK2Q96RR4 588 aa26.01■■□□□ 1.75
LMNA-221ENST00000506981 KCNQ2O43526 872 aa26■■□□□ 1.75
LMNA-221ENST00000506981 SYTL4Q96C24 671 aaPredicted RBP26■■□□□ 1.75
LMNA-221ENST00000506981 TOGARAM1Q9Y4F4 1720 aa26■■□□□ 1.75
LMNA-221ENST00000506981 KDRP35968 1356 aa25.99■■□□□ 1.75
LMNA-221ENST00000506981 PLSCR1O15162 318 aa25.99■■□□□ 1.75
LMNA-221ENST00000506981 PTF1AQ7RTS3 328 aa25.99■■□□□ 1.75
LMNA-221ENST00000506981 AEBP1Q8IUX7 1158 aa25.99■■□□□ 1.75
LMNA-221ENST00000506981 VIRMAQ69YN4 1812 aaKnown RBP25.98■■□□□ 1.75
LMNA-221ENST00000506981 CYP27B1O15528 508 aa25.98■■□□□ 1.75
LMNA-221ENST00000506981 PLEKHO1Q53GL0 409 aaPredicted RBP25.98■■□□□ 1.75
LMNA-221ENST00000506981 AMOTQ4VCS5 1084 aa25.97■■□□□ 1.75
LMNA-221ENST00000506981 U2SURPO15042 1029 aaKnown RBP25.96■■□□□ 1.75
LMNA-221ENST00000506981 IFNL2Q8IZJ0 200 aa25.96■■□□□ 1.75
LMNA-221ENST00000506981 HMOX1P09601 288 aa25.95■■□□□ 1.74
LMNA-221ENST00000506981 PRIM1P49642 420 aaKnown RBP25.95■■□□□ 1.74
LMNA-221ENST00000506981 ZNF316A6NFI3 1004 aaPredicted RBP25.94■■□□□ 1.74
LMNA-221ENST00000506981 RALBP1Q15311 655 aa25.94■■□□□ 1.74
LMNA-221ENST00000506981 NUDCQ9Y266 331 aa25.94■■□□□ 1.74
LMNA-221ENST00000506981 PHKG2P15735 406 aa25.93■■□□□ 1.74
LMNA-221ENST00000506981 LY75O60449 1722 aa25.93■■□□□ 1.74
LMNA-221ENST00000506981 ZNF530Q6P9A1 599 aaPredicted RBP25.92■■□□□ 1.74
LMNA-221ENST00000506981 C1orf141Q5JVX7 400 aa25.91■■□□□ 1.74
LMNA-221ENST00000506981 SCN11AQ9UI33 1791 aa25.9■■□□□ 1.74
LMNA-221ENST00000506981 HSP90AB1P08238 724 aaKnown RBP25.9■■□□□ 1.74
LMNA-221ENST00000506981 NKX1-1Q15270 411 aaPredicted RBP25.9■■□□□ 1.74
LMNA-221ENST00000506981 NBPF14Q5TI25 921 aa25.9■■□□□ 1.74
LMNA-221ENST00000506981 TXNRD1Q16881 649 aa25.88■■□□□ 1.73
LMNA-221ENST00000506981 MPRIPQ6WCQ1 1025 aa25.86■■□□□ 1.73
LMNA-221ENST00000506981 MYBBP1AQ9BQG0 1328 aaKnown RBP25.85■■□□□ 1.73
LMNA-221ENST00000506981 U2AF1L5P0DN76 240 aaPredicted RBP25.84■■□□□ 1.73
LMNA-221ENST00000506981 U2AF1Q01081 240 aaKnown RBP eCLIP25.84■■□□□ 1.73
LMNA-221ENST00000506981 DCAF5Q96JK2 942 aa25.84■■□□□ 1.73
LMNA-221ENST00000506981 TMOD3Q9NYL9 352 aa25.84■■□□□ 1.73
LMNA-221ENST00000506981 PSDA5PKW4 1024 aaPredicted RBP25.83■■□□□ 1.73
LMNA-221ENST00000506981 R3HDM1Q15032 1099 aaKnown RBP25.81■■□□□ 1.72
LMNA-221ENST00000506981 AKAP4Q5JQC9 854 aa25.81■■□□□ 1.72
LMNA-221ENST00000506981 PROM2Q8N271 834 aa25.81■■□□□ 1.72
LMNA-221ENST00000506981 TAF1LQ8IZX4 1826 aa25.81■■□□□ 1.72
LMNA-221ENST00000506981 PAPPAQ13219 1627 aa25.81■■□□□ 1.72
LMNA-221ENST00000506981 KDM6AO15550 1401 aaPredicted RBP25.8■■□□□ 1.72
LMNA-221ENST00000506981 SLC27A3Q5K4L6 730 aa25.8■■□□□ 1.72
LMNA-221ENST00000506981 SMARCC1Q92922 1105 aaPredicted RBP25.8■■□□□ 1.72
LMNA-221ENST00000506981 C5P01031 1676 aa25.8■■□□□ 1.72
LMNA-221ENST00000506981 ERVV-2B6SEH9 535 aa25.79■■□□□ 1.72
LMNA-221ENST00000506981 PRKAR2BP31323 418 aa25.79■■□□□ 1.72
LMNA-221ENST00000506981 MTHFSDQ2M296 383 aaKnown RBP25.78■■□□□ 1.72
LMNA-221ENST00000506981 GAS2L2Q8NHY3 880 aa25.78■■□□□ 1.72
LMNA-221ENST00000506981 PIGBQ92521 554 aa25.78■■□□□ 1.72
LMNA-221ENST00000506981 RSPH6AQ9H0K4 717 aa25.78■■□□□ 1.72
LMNA-221ENST00000506981 STK32BQ9NY57 414 aa25.78■■□□□ 1.72
LMNA-221ENST00000506981 PALLDQ8WX93 1383 aa25.78■■□□□ 1.72
LMNA-221ENST00000506981 CABP4P57796 275 aa25.77■■□□□ 1.72
LMNA-221ENST00000506981 PRKRIP1Q9H875 184 aaPredicted RBP25.77■■□□□ 1.72
LMNA-221ENST00000506981 FCHSD2O94868 740 aa25.76■■□□□ 1.71
LMNA-221ENST00000506981 NEFMP07197 916 aa25.76■■□□□ 1.71
LMNA-221ENST00000506981 CCNL1Q9UK58 526 aaPredicted RBP25.76■■□□□ 1.71
LMNA-221ENST00000506981 ADAMTS7Q9UKP4 1686 aa25.76■■□□□ 1.71
LMNA-221ENST00000506981 QSER1Q2KHR3 1735 aa25.75■■□□□ 1.71
LMNA-221ENST00000506981 ANO8Q9HCE9 1232 aaPredicted RBP25.75■■□□□ 1.71
LMNA-221ENST00000506981 HMGB2P26583 209 aaKnown RBP25.74■■□□□ 1.71
LMNA-221ENST00000506981 DLG5Q8TDM6 1919 aa25.74■■□□□ 1.71
LMNA-221ENST00000506981 MAP3K5Q99683 1374 aa25.73■■□□□ 1.71
LMNA-221ENST00000506981 TUBGCP6Q96RT7 1819 aa25.73■■□□□ 1.71
LMNA-221ENST00000506981 LRRC4BQ9NT99 713 aa25.73■■□□□ 1.71
LMNA-221ENST00000506981 SLC15A2Q16348 729 aa25.71■■□□□ 1.71
LMNA-221ENST00000506981 PNNQ9H307 717 aaKnown RBP25.71■■□□□ 1.71
LMNA-221ENST00000506981 CASZ1Q86V15 1759 aa25.71■■□□□ 1.71
LMNA-221ENST00000506981 MRC1P22897 1456 aa25.71■■□□□ 1.71
LMNA-221ENST00000506981 LRP5O75197 1615 aa25.7■■□□□ 1.71
LMNA-221ENST00000506981 ZNF831Q5JPB2 1677 aa25.69■■□□□ 1.7
LMNA-221ENST00000506981 GNAT3A8MTJ3 354 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms