RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 CALRP27797 417 aaKnown RBP6.13□□□□□ -1.43
MATR3-211ENST00000505625 WAPLQ7Z5K2 1190 aa6.13□□□□□ -1.43
MATR3-211ENST00000505625 ZNF444Q8N0Y2 327 aaPredicted RBP6.13□□□□□ -1.43
MATR3-211ENST00000505625 SERPINA10Q9UK55 444 aa6.13□□□□□ -1.43
MATR3-211ENST00000505625 ANKRD30AQ9BXX3 1397 aa6.13□□□□□ -1.43
MATR3-211ENST00000505625 POGZQ7Z3K3 1410 aa6.13□□□□□ -1.43
MATR3-211ENST00000505625 POTEJP0CG39 1038 aa6.13□□□□□ -1.43
MATR3-211ENST00000505625 PRKCSHP14314 528 aaPredicted RBP6.13□□□□□ -1.43
MATR3-211ENST00000505625 EIF6P56537 245 aaKnown RBP6.13□□□□□ -1.43
MATR3-211ENST00000505625 GOLGA3Q08378 1498 aa6.13□□□□□ -1.43
MATR3-211ENST00000505625 CABP5Q9NP86 173 aa6.13□□□□□ -1.43
MATR3-211ENST00000505625 MACROD2A1Z1Q3 448 aa6.12□□□□□ -1.43
MATR3-211ENST00000505625 NACAP1Q9BZK3 213 aa6.12□□□□□ -1.43
MATR3-211ENST00000505625 CENPHQ9H3R5 247 aa6.12□□□□□ -1.43
MATR3-211ENST00000505625 MYO6Q9UM54 1294 aa6.12□□□□□ -1.43
MATR3-211ENST00000505625 UNC13AQ9UPW8 1703 aa6.12□□□□□ -1.43
MATR3-211ENST00000505625 AQRO60306 1485 aaKnown RBP eCLIP6.12□□□□□ -1.433e-10■■■■□ 24.2
MATR3-211ENST00000505625 CENPJQ9HC77 1338 aaPredicted RBP6.12□□□□□ -1.43
MATR3-211ENST00000505625 ABL1P00519 1130 aa6.12□□□□□ -1.43
MATR3-211ENST00000505625 NCBP1Q09161 790 aaKnown RBP6.12□□□□□ -1.43
MATR3-211ENST00000505625 NLRP13Q86W25 1043 aa6.12□□□□□ -1.43
MATR3-211ENST00000505625 GGNBP2Q9H3C7 697 aa6.12□□□□□ -1.43
MATR3-211ENST00000505625 CARMIL1Q5VZK9 1371 aa6.12□□□□□ -1.43
MATR3-211ENST00000505625 HMGB2P26583 209 aaKnown RBP6.12□□□□□ -1.43
MATR3-211ENST00000505625 GABPAQ06546 454 aa6.12□□□□□ -1.43
MATR3-211ENST00000505625 NBPF6Q5VWK0 638 aa6.12□□□□□ -1.43
MATR3-211ENST00000505625 DPY19L2Q6NUT2 758 aa6.12□□□□□ -1.43
MATR3-211ENST00000505625 NBPF5PQ86XG9 351 aaPredicted RBP6.12□□□□□ -1.43
MATR3-211ENST00000505625 NBPF4Q96M43 638 aa6.12□□□□□ -1.43
MATR3-211ENST00000505625 EHMT1Q9H9B1 1298 aa6.12□□□□□ -1.43
MATR3-211ENST00000505625 PICK1Q9NRD5 415 aa6.12□□□□□ -1.43
MATR3-211ENST00000505625 JAG2Q9Y219 1238 aa6.12□□□□□ -1.43
MATR3-211ENST00000505625 ARHGAP35Q9NRY4 1499 aa6.12□□□□□ -1.43
MATR3-211ENST00000505625 TBC1D12O60347 775 aa6.12□□□□□ -1.43
MATR3-211ENST00000505625 SORBS3O60504 671 aa6.12□□□□□ -1.43
MATR3-211ENST00000505625 CFAP65Q6ZU64 1925 aaKnown RBP6.11□□□□□ -1.43
MATR3-211ENST00000505625 EPB41L2O43491 1005 aaKnown RBP6.11□□□□□ -1.43
MATR3-211ENST00000505625 SPTY2D1Q68D10 685 aaPredicted RBP6.11□□□□□ -1.43
MATR3-211ENST00000505625 PPM1EQ8WY54 764 aa6.11□□□□□ -1.43
MATR3-211ENST00000505625 PPFIA1Q13136 1202 aa6.11□□□□□ -1.43
MATR3-211ENST00000505625 ERC2O15083 957 aa6.11□□□□□ -1.43
MATR3-211ENST00000505625 CCDC175P0C221 793 aa6.11□□□□□ -1.43
MATR3-211ENST00000505625 BMS1Q14692 1282 aaKnown RBP6.11□□□□□ -1.43
MATR3-211ENST00000505625 CCDC112Q8NEF3 446 aa6.11□□□□□ -1.43
MATR3-211ENST00000505625 NBPF3Q9H094 633 aa6.11□□□□□ -1.43
MATR3-211ENST00000505625 SYNCQ9H7C4 482 aa6.11□□□□□ -1.43
MATR3-211ENST00000505625 LRRFIP2Q9Y608 721 aaKnown RBP6.11□□□□□ -1.43
MATR3-211ENST00000505625 CEP162Q5TB80 1403 aa6.11□□□□□ -1.43
MATR3-211ENST00000505625 SETDB2Q96T68 719 aa6.11□□□□□ -1.43
MATR3-211ENST00000505625 HAUS7Q99871 368 aa6.11□□□□□ -1.43
MATR3-211ENST00000505625 XRCC6P12956 609 aaKnown RBP eCLIP6.11□□□□□ -1.43
MATR3-211ENST00000505625 CHRNA2Q15822 529 aa6.11□□□□□ -1.43
MATR3-211ENST00000505625 UBAC1Q9BSL1 405 aa6.11□□□□□ -1.43
MATR3-211ENST00000505625 NOM1Q5C9Z4 860 aaKnown RBP6.1□□□□□ -1.43
MATR3-211ENST00000505625 RNF187Q5TA31 235 aaPredicted RBP6.1□□□□□ -1.43
MATR3-211ENST00000505625 SASS6Q6UVJ0 657 aa6.1□□□□□ -1.43
MATR3-211ENST00000505625 MICAL1Q8TDZ2 1067 aa6.1□□□□□ -1.43
MATR3-211ENST00000505625 GNL1P36915 607 aaPredicted RBP6.1□□□□□ -1.43
MATR3-211ENST00000505625 HSPA5P11021 654 aaKnown RBP6.1□□□□□ -1.43
MATR3-211ENST00000505625 SYCP3Q8IZU3 236 aa6.1□□□□□ -1.43
MATR3-211ENST00000505625 FMNL2Q96PY5 1086 aa6.1□□□□□ -1.43
MATR3-211ENST00000505625 TRMT112Q9UI30 125 aaKnown RBP6.1□□□□□ -1.43
MATR3-211ENST00000505625 NINLQ9Y2I6 1382 aa6.1□□□□□ -1.43
MATR3-211ENST00000505625 RNF169Q8NCN4 708 aa6.1□□□□□ -1.43
MATR3-211ENST00000505625 PTPRGP23470 1445 aa6.1□□□□□ -1.43
MATR3-211ENST00000505625 UACAQ9BZF9 1416 aa6.1□□□□□ -1.43
MATR3-211ENST00000505625 RANBP6O60518 1105 aaKnown RBP6.1□□□□□ -1.43
MATR3-211ENST00000505625 ZWINTO95229 277 aa6.1□□□□□ -1.43
MATR3-211ENST00000505625 CTNNA2P26232 953 aa6.1□□□□□ -1.43
MATR3-211ENST00000505625 USP8P40818 1118 aa6.1□□□□□ -1.43
MATR3-211ENST00000505625 SMC1AQ14683 1233 aaKnown RBP6.1□□□□□ -1.43
MATR3-211ENST00000505625 PRAM1Q96QH2 718 aa6.1□□□□□ -1.43
MATR3-211ENST00000505625 ATF5Q9Y2D1 282 aaPredicted RBP6.1□□□□□ -1.43
MATR3-211ENST00000505625 BAG6P46379 1132 aa6.1□□□□□ -1.43
MATR3-211ENST00000505625 TMOD4Q9NZQ9 345 aa6.1□□□□□ -1.43
MATR3-211ENST00000505625 RIOK3O14730 519 aaKnown RBP6.09□□□□□ -1.43
MATR3-211ENST00000505625 ZYXQ15942 572 aaKnown RBP6.09□□□□□ -1.43
MATR3-211ENST00000505625 GADL1Q6ZQY3 521 aa6.09□□□□□ -1.43
MATR3-211ENST00000505625 PANK3Q9H999 370 aa6.09□□□□□ -1.43
MATR3-211ENST00000505625 CNTROBQ8N137 903 aa6.09□□□□□ -1.43
MATR3-211ENST00000505625 SMCR8Q8TEV9 937 aaPredicted RBP6.09□□□□□ -1.43
MATR3-211ENST00000505625 RSPH6AQ9H0K4 717 aa6.09□□□□□ -1.43
MATR3-211ENST00000505625 SMC3Q9UQE7 1217 aa6.09□□□□□ -1.43
MATR3-211ENST00000505625 DHX57Q6P158 1386 aaKnown RBP6.09□□□□□ -1.43
MATR3-211ENST00000505625 CCDC82Q8N4S0 544 aa6.09□□□□□ -1.43
MATR3-211ENST00000505625 MYD88Q99836 296 aa6.09□□□□□ -1.43
MATR3-211ENST00000505625 ZBED2Q9BTP6 218 aa6.09□□□□□ -1.43
MATR3-211ENST00000505625 CLSTN2Q9H4D0 955 aa6.09□□□□□ -1.43
MATR3-211ENST00000505625 ZNHIT6Q9NWK9 470 aaKnown RBP6.09□□□□□ -1.43
MATR3-211ENST00000505625 IVNS1ABPQ9Y6Y0 642 aa6.09□□□□□ -1.43
MATR3-211ENST00000505625 SETD1BQ9UPS6 1966 aaKnown RBP6.09□□□□□ -1.43
MATR3-211ENST00000505625 SMC2O95347 1197 aa6.09□□□□□ -1.44
MATR3-211ENST00000505625 RAPGEF3O95398 923 aa6.09□□□□□ -1.44
MATR3-211ENST00000505625 SEC24BO95487 1268 aa6.09□□□□□ -1.44
MATR3-211ENST00000505625 HLA-DOAP06340 250 aa6.09□□□□□ -1.44
MATR3-211ENST00000505625 HSP90AA2PQ14568 343 aaPredicted RBP6.09□□□□□ -1.44
MATR3-211ENST00000505625 CCDC30Q5VVM6 783 aa6.09□□□□□ -1.44
MATR3-211ENST00000505625 PKD2L1Q9P0L9 805 aa6.09□□□□□ -1.44
MATR3-211ENST00000505625 RRS1Q15050 365 aaKnown RBP6.09□□□□□ -1.44
MATR3-211ENST00000505625 FOXO3O43524 673 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms