RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 U2AF1Q01081 240 aaKnown RBP eCLIP12.4□□□□□ -0.427e-10■■□□□ 13
TPM3-218ENST00000505010 KCNH5Q8NCM2 988 aa12.4□□□□□ -0.42
TPM3-218ENST00000505010 SYT17Q9BSW7 474 aa12.4□□□□□ -0.42
TPM3-218ENST00000505010 PDGFDQ9GZP0 370 aaPredicted RBP12.4□□□□□ -0.42
TPM3-218ENST00000505010 ATF5Q9Y2D1 282 aaPredicted RBP12.4□□□□□ -0.42
TPM3-218ENST00000505010 RTL1A6NKG5 1358 aa12.4□□□□□ -0.42
TPM3-218ENST00000505010 ZBTB7CA1YPR0 619 aa12.39□□□□□ -0.43
TPM3-218ENST00000505010 PTGER2P43116 358 aa12.39□□□□□ -0.43
TPM3-218ENST00000505010 AMPHP49418 695 aa12.39□□□□□ -0.43
TPM3-218ENST00000505010 FHDC1Q9C0D6 1143 aaPredicted RBP12.39□□□□□ -0.43
TPM3-218ENST00000505010 ANO8Q9HCE9 1232 aaPredicted RBP12.39□□□□□ -0.43
TPM3-218ENST00000505010 KIF24Q5T7B8 1368 aa12.39□□□□□ -0.43
TPM3-218ENST00000505010 RGPD2P0DJD1 1756 aa12.38□□□□□ -0.43
TPM3-218ENST00000505010 CEP350Q5VT06 3117 aa12.38□□□□□ -0.43
TPM3-218ENST00000505010 IL13P35225 146 aa12.37□□□□□ -0.43
TPM3-218ENST00000505010 HSP90AB2PQ58FF8 381 aa12.37□□□□□ -0.43
TPM3-218ENST00000505010 OVOS2A0A0G2JMS6 1433 aa12.37□□□□□ -0.43
TPM3-218ENST00000505010 GCP02774 474 aa12.36□□□□□ -0.43
TPM3-218ENST00000505010 HOXC9P31274 260 aa12.36□□□□□ -0.43
TPM3-218ENST00000505010 EIF4A2Q14240 407 aaKnown RBP12.36□□□□□ -0.43
TPM3-218ENST00000505010 PROM2Q8N271 834 aa12.36□□□□□ -0.43
TPM3-218ENST00000505010 STK32BQ9NY57 414 aa12.36□□□□□ -0.43
TPM3-218ENST00000505010 SALL2Q9Y467 1007 aaPredicted RBP12.36□□□□□ -0.43
TPM3-218ENST00000505010 COL18A1P39060 1754 aa12.35□□□□□ -0.43
TPM3-218ENST00000505010 FAM208AQ9UK61 1670 aaKnown RBP12.35□□□□□ -0.43
TPM3-218ENST00000505010 DDB1Q16531 1140 aa12.35□□□□□ -0.43
TPM3-218ENST00000505010 RUNDC1Q96C34 613 aa12.35□□□□□ -0.43
TPM3-218ENST00000505010 GOLGB1Q14789 3259 aaKnown RBP12.35□□□□□ -0.43
TPM3-218ENST00000505010 ABCC6O95255 1503 aa12.35□□□□□ -0.43
TPM3-218ENST00000505010 DLG5Q8TDM6 1919 aa12.35□□□□□ -0.43
TPM3-218ENST00000505010 MAPK8IP3Q9UPT6 1336 aa12.35□□□□□ -0.43
TPM3-218ENST00000505010 CPDO75976 1380 aa12.34□□□□□ -0.43
TPM3-218ENST00000505010 CASZ1Q86V15 1759 aa12.34□□□□□ -0.43
TPM3-218ENST00000505010 GIGYF1O75420 1035 aaPredicted RBP12.34□□□□□ -0.43
TPM3-218ENST00000505010 SLC15A2Q16348 729 aa12.34□□□□□ -0.43
TPM3-218ENST00000505010 PTF1AQ7RTS3 328 aa12.34□□□□□ -0.43
TPM3-218ENST00000505010 MTFR1LQ9H019 292 aa12.34□□□□□ -0.43
TPM3-218ENST00000505010 CHD4Q14839 1912 aa12.34□□□□□ -0.43
TPM3-218ENST00000505010 APAF1O14727 1248 aa12.33□□□□□ -0.44
TPM3-218ENST00000505010 HMOX1P09601 288 aa12.33□□□□□ -0.44
TPM3-218ENST00000505010 ARHGEF25Q86VW2 580 aa12.33□□□□□ -0.44
TPM3-218ENST00000505010 IP6K1Q92551 441 aa12.33□□□□□ -0.44
TPM3-218ENST00000505010 LTV1Q96GA3 475 aaPredicted RBP12.33□□□□□ -0.44
TPM3-218ENST00000505010 CRB1P82279 1406 aa12.32□□□□□ -0.44
TPM3-218ENST00000505010 PRKAR2BP31323 418 aa12.32□□□□□ -0.44
TPM3-218ENST00000505010 GPR162Q16538 588 aa12.32□□□□□ -0.44
TPM3-218ENST00000505010 TXNRD1Q16881 649 aa12.32□□□□□ -0.44
TPM3-218ENST00000505010 ARXQ96QS3 562 aa12.32□□□□□ -0.44
TPM3-218ENST00000505010 RSPH6AQ9H0K4 717 aa12.32□□□□□ -0.44
TPM3-218ENST00000505010 PNNQ9H307 717 aaKnown RBP12.32□□□□□ -0.44
TPM3-218ENST00000505010 RGPD3A6NKT7 1758 aaPredicted RBP12.32□□□□□ -0.44
TPM3-218ENST00000505010 RGPD4Q7Z3J3 1758 aa12.32□□□□□ -0.44
TPM3-218ENST00000505010 PARP4Q9UKK3 1724 aaKnown RBP12.31□□□□□ -0.44
TPM3-218ENST00000505010 FCHSD2O94868 740 aa12.31□□□□□ -0.44
TPM3-218ENST00000505010 NEFMP07197 916 aa12.31□□□□□ -0.44
TPM3-218ENST00000505010 TOM1L2Q6ZVM7 507 aa12.31□□□□□ -0.44
TPM3-218ENST00000505010 SGIP1Q9BQI5 828 aa12.31□□□□□ -0.44
TPM3-218ENST00000505010 RRP7AQ9Y3A4 280 aaKnown RBP12.31□□□□□ -0.44
TPM3-218ENST00000505010 LMO7Q8WWI1 1683 aa12.31□□□□□ -0.44
TPM3-218ENST00000505010 COL5A2P05997 1499 aaPredicted RBP12.3□□□□□ -0.44
TPM3-218ENST00000505010 SULT6B1Q6IMI4 303 aa12.3□□□□□ -0.44
TPM3-218ENST00000505010 AEBP1Q8IUX7 1158 aa12.3□□□□□ -0.44
TPM3-218ENST00000505010 PLEKHF1Q96S99 279 aa12.3□□□□□ -0.44
TPM3-218ENST00000505010 IGSF1Q8N6C5 1336 aa12.3□□□□□ -0.44
TPM3-218ENST00000505010 NEUROD2Q15784 382 aa12.29□□□□□ -0.44
TPM3-218ENST00000505010 MARCH10Q8NA82 808 aaPredicted RBP12.29□□□□□ -0.44
TPM3-218ENST00000505010 CDCA7Q9BWT1 371 aaPredicted RBP12.29□□□□□ -0.44
TPM3-218ENST00000505010 SBF2Q86WG5 1849 aa12.28□□□□□ -0.44
TPM3-218ENST00000505010 ANKRD24Q8TF21 1146 aa12.28□□□□□ -0.44
TPM3-218ENST00000505010 EYA1Q99502 592 aa12.28□□□□□ -0.44
TPM3-218ENST00000505010 KDRP35968 1356 aa12.28□□□□□ -0.44
TPM3-218ENST00000505010 NGEFQ8N5V2 710 aa12.27□□□□□ -0.45
TPM3-218ENST00000505010 MAP3K5Q99683 1374 aa12.27□□□□□ -0.45
TPM3-218ENST00000505010 BCL9O00512 1426 aa12.27□□□□□ -0.45
TPM3-218ENST00000505010 VIRMAQ69YN4 1812 aaKnown RBP12.26□□□□□ -0.45
TPM3-218ENST00000505010 EXOC5O00471 708 aa12.26□□□□□ -0.45
TPM3-218ENST00000505010 TMPOP42166 694 aaKnown RBP12.26□□□□□ -0.45
TPM3-218ENST00000505010 PELP1Q8IZL8 1130 aaKnown RBP12.26□□□□□ -0.45
TPM3-218ENST00000505010 USHBP1Q8N6Y0 703 aa12.26□□□□□ -0.45
TPM3-218ENST00000505010 ZNF521Q96K83 1311 aa12.26□□□□□ -0.45
TPM3-218ENST00000505010 NFE2L2Q16236 605 aa12.25□□□□□ -0.45
TPM3-218ENST00000505010 PHACTR3Q96KR7 559 aa12.25□□□□□ -0.45
TPM3-218ENST00000505010 AXIN2Q9Y2T1 843 aa12.25□□□□□ -0.45
TPM3-218ENST00000505010 ERBB3P21860 1342 aa12.25□□□□□ -0.45
TPM3-218ENST00000505010 LRRC37A3O60309 1634 aa12.24□□□□□ -0.45
TPM3-218ENST00000505010 CSB-PGBD3P0DP91 1061 aa12.24□□□□□ -0.45
TPM3-218ENST00000505010 RIPK4P57078 832 aa12.24□□□□□ -0.45
TPM3-218ENST00000505010 GOLGA2Q08379 1002 aa12.24□□□□□ -0.45
TPM3-218ENST00000505010 NCAPD2Q15021 1401 aa12.24□□□□□ -0.45
TPM3-218ENST00000505010 NBPF6Q5VWK0 638 aa12.24□□□□□ -0.45
TPM3-218ENST00000505010 WDR17Q8IZU2 1322 aa12.24□□□□□ -0.45
TPM3-218ENST00000505010 KLHL34Q8N239 644 aa12.24□□□□□ -0.45
TPM3-218ENST00000505010 CDCA7LQ96GN5 454 aa12.24□□□□□ -0.45
TPM3-218ENST00000505010 NBPF4Q96M43 638 aa12.24□□□□□ -0.45
TPM3-218ENST00000505010 CCDC27Q2M243 656 aa12.23□□□□□ -0.45
TPM3-218ENST00000505010 NCBP3Q53F19 620 aaKnown RBP12.23□□□□□ -0.45
TPM3-218ENST00000505010 WWC1Q8IX03 1113 aa12.23□□□□□ -0.45
TPM3-218ENST00000505010 POLD1P28340 1107 aa12.22□□□□□ -0.45
TPM3-218ENST00000505010 CARD10Q9BWT7 1032 aa12.22□□□□□ -0.45
TPM3-218ENST00000505010 WNK3Q9BYP7 1800 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms