RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 IFT57Q9NWB7 429 aa6.98□□□□□ -1.29
NIPBL-204ENST00000504430 CD44P16070 742 aaKnown RBP6.98□□□□□ -1.29
NIPBL-204ENST00000504430 TSHZ1Q6ZSZ6 1077 aa6.98□□□□□ -1.29
NIPBL-204ENST00000504430 PTCD2Q8WV60 388 aaKnown RBP6.98□□□□□ -1.29
NIPBL-204ENST00000504430 ADAM33Q9BZ11 813 aa6.98□□□□□ -1.29
NIPBL-204ENST00000504430 TSKSQ9UJT2 592 aa6.98□□□□□ -1.29
NIPBL-204ENST00000504430 PRSS12P56730 875 aa6.97□□□□□ -1.29
NIPBL-204ENST00000504430 FILIP1Q7Z7B0 1213 aa6.97□□□□□ -1.29
NIPBL-204ENST00000504430 SULF1Q8IWU6 871 aa6.97□□□□□ -1.29
NIPBL-204ENST00000504430 MAF1Q9H063 256 aa6.97□□□□□ -1.29
NIPBL-204ENST00000504430 PCDH12Q9NPG4 1184 aa6.97□□□□□ -1.29
NIPBL-204ENST00000504430 CCDC189A1A4V9 331 aa6.97□□□□□ -1.29
NIPBL-204ENST00000504430 RHBDL3P58872 404 aa6.97□□□□□ -1.29
NIPBL-204ENST00000504430 RACK1P63244 317 aaKnown RBP6.97□□□□□ -1.29
NIPBL-204ENST00000504430 SECISBP2LQ93073 1101 aaKnown RBP6.97□□□□□ -1.29
NIPBL-204ENST00000504430 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.97□□□□□ -1.29
NIPBL-204ENST00000504430 PDE3BQ13370 1112 aa6.97□□□□□ -1.29
NIPBL-204ENST00000504430 CLEC4GQ6UXB4 293 aa6.97□□□□□ -1.29
NIPBL-204ENST00000504430 CCDC184Q52MB2 194 aa6.96□□□□□ -1.29
NIPBL-204ENST00000504430 CCDC181Q5TID7 509 aa6.96□□□□□ -1.3
NIPBL-204ENST00000504430 ZSCAN29Q8IWY8 852 aaPredicted RBP6.96□□□□□ -1.3
NIPBL-204ENST00000504430 MRS2Q9HD23 443 aa6.96□□□□□ -1.3
NIPBL-204ENST00000504430 CUEDC1Q9NWM3 386 aaPredicted RBP6.96□□□□□ -1.3
NIPBL-204ENST00000504430 VTI1BQ9UEU0 232 aa6.96□□□□□ -1.3
NIPBL-204ENST00000504430 EMILIN1Q9Y6C2 1016 aa6.96□□□□□ -1.3
NIPBL-204ENST00000504430 TMC1Q8TDI8 760 aa6.96□□□□□ -1.3
NIPBL-204ENST00000504430 MTA3Q9BTC8 594 aa6.96□□□□□ -1.3
NIPBL-204ENST00000504430 CXXC1Q9P0U4 656 aaPredicted RBP6.96□□□□□ -1.3
NIPBL-204ENST00000504430 CCER2I3L3R5 266 aa6.95□□□□□ -1.3
NIPBL-204ENST00000504430 COL9A1P20849 921 aa6.95□□□□□ -1.3
NIPBL-204ENST00000504430 XPCQ01831 940 aaPredicted RBP6.95□□□□□ -1.3
NIPBL-204ENST00000504430 NR1H3Q13133 447 aa6.95□□□□□ -1.3
NIPBL-204ENST00000504430 RGL4Q8IZJ4 473 aa6.95□□□□□ -1.3
NIPBL-204ENST00000504430 TSR2Q969E8 191 aaKnown RBP6.95□□□□□ -1.3
NIPBL-204ENST00000504430 RPS6KC1Q96S38 1066 aa6.95□□□□□ -1.3
NIPBL-204ENST00000504430 CCDC85CA6NKD9 419 aa6.95□□□□□ -1.3
NIPBL-204ENST00000504430 SLC10A3P09131 477 aa6.95□□□□□ -1.3
NIPBL-204ENST00000504430 ZNF454Q8N9F8 522 aa6.95□□□□□ -1.3
NIPBL-204ENST00000504430 KANSL2Q9H9L4 492 aa6.95□□□□□ -1.3
NIPBL-204ENST00000504430 GJA5P36382 358 aa6.95□□□□□ -1.3
NIPBL-204ENST00000504430 FUT2Q10981 343 aa6.95□□□□□ -1.3
NIPBL-204ENST00000504430 PLPP7Q8NBV4 271 aa6.95□□□□□ -1.3
NIPBL-204ENST00000504430 RNF34Q969K3 372 aa6.95□□□□□ -1.3
NIPBL-204ENST00000504430 TMX4Q9H1E5 349 aaPredicted RBP6.95□□□□□ -1.3
NIPBL-204ENST00000504430 TMEM134Q9H6X4 195 aa6.95□□□□□ -1.3
NIPBL-204ENST00000504430 GNL3LQ9NVN8 582 aaKnown RBP6.95□□□□□ -1.3
NIPBL-204ENST00000504430 LDHBP07195 334 aaKnown RBP6.94□□□□□ -1.3
NIPBL-204ENST00000504430 FKBP5Q13451 457 aaPredicted RBP6.94□□□□□ -1.3
NIPBL-204ENST00000504430 KRBA2Q6ZNG9 492 aa6.94□□□□□ -1.3
NIPBL-204ENST00000504430 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.94□□□□□ -1.3
NIPBL-204ENST00000504430 WDHD1O75717 1129 aaPredicted RBP6.94□□□□□ -1.3
NIPBL-204ENST00000504430 RBM10P98175 930 aaKnown RBP6.94□□□□□ -1.3
NIPBL-204ENST00000504430 INPP5FQ9Y2H2 1132 aa6.94□□□□□ -1.3
NIPBL-204ENST00000504430 ZNF76P36508 570 aa6.93□□□□□ -1.3
NIPBL-204ENST00000504430 C4orf46Q504U0 113 aa6.93□□□□□ -1.3
NIPBL-204ENST00000504430 ZNF746Q6NUN9 644 aaPredicted RBP6.93□□□□□ -1.3
NIPBL-204ENST00000504430 TAS1R3Q7RTX0 852 aa6.93□□□□□ -1.3
NIPBL-204ENST00000504430 JDP2Q8WYK2 163 aa6.93□□□□□ -1.3
NIPBL-204ENST00000504430 HINFPQ9BQA5 517 aa6.93□□□□□ -1.3
NIPBL-204ENST00000504430 UBA5Q9GZZ9 404 aa6.93□□□□□ -1.3
NIPBL-204ENST00000504430 OSBPL2Q9H1P3 480 aa6.93□□□□□ -1.3
NIPBL-204ENST00000504430 HSP90AB2PQ58FF8 381 aa6.93□□□□□ -1.3
NIPBL-204ENST00000504430 MCF2L2Q86YR7 1114 aa6.93□□□□□ -1.3
NIPBL-204ENST00000504430 RNF135Q8IUD6 432 aa6.93□□□□□ -1.3
NIPBL-204ENST00000504430 TPCN2Q8NHX9 752 aa6.93□□□□□ -1.3
NIPBL-204ENST00000504430 MAGEC2Q9UBF1 373 aaPredicted RBP6.93□□□□□ -1.3
NIPBL-204ENST00000504430 G3V3G9 751 aa6.93□□□□□ -1.3
NIPBL-204ENST00000504430 DKK1O94907 266 aa6.93□□□□□ -1.3
NIPBL-204ENST00000504430 PLEKHM2Q8IWE5 1019 aa6.93□□□□□ -1.3
NIPBL-204ENST00000504430 CCDC87Q9NVE4 849 aa6.93□□□□□ -1.3
NIPBL-204ENST00000504430 ZBBXA8MT70 800 aa6.92□□□□□ -1.3
NIPBL-204ENST00000504430 SORBS3O60504 671 aa6.92□□□□□ -1.3
NIPBL-204ENST00000504430 FKBP4Q02790 459 aaKnown RBP eCLIP6.92□□□□□ -1.3
NIPBL-204ENST00000504430 BIRC2Q13490 618 aa6.92□□□□□ -1.3
NIPBL-204ENST00000504430 SWI5Q1ZZU3 235 aa6.92□□□□□ -1.3
NIPBL-204ENST00000504430 TGIF2Q9GZN2 237 aa6.92□□□□□ -1.3
NIPBL-204ENST00000504430 MAP10Q9P2G4 905 aa6.92□□□□□ -1.3
NIPBL-204ENST00000504430 BDNFP23560 247 aa6.92□□□□□ -1.3
NIPBL-204ENST00000504430 MAP9Q49MG5 647 aa6.92□□□□□ -1.3
NIPBL-204ENST00000504430 TSEN2Q8NCE0 465 aaKnown RBP6.92□□□□□ -1.3
NIPBL-204ENST00000504430 KHSRPQ92945 711 aaKnown RBP eCLIP6.92□□□□□ -1.31e-6■■■■□ 21.3
NIPBL-204ENST00000504430 DDX56Q9NY93 547 aaKnown RBP6.92□□□□□ -1.3
NIPBL-204ENST00000504430 TTF2Q9UNY4 1162 aaKnown RBP6.92□□□□□ -1.3
NIPBL-204ENST00000504430 LMOD3Q0VAK6 560 aa6.92□□□□□ -1.3
NIPBL-204ENST00000504430 ATP5J2-PTCD1G3V325 749 aa6.91□□□□□ -1.3
NIPBL-204ENST00000504430 IBSPP21815 317 aaPredicted RBP6.91□□□□□ -1.3
NIPBL-204ENST00000504430 MCCP23508 829 aa6.91□□□□□ -1.3
NIPBL-204ENST00000504430 MPSTP25325 297 aa6.91□□□□□ -1.3
NIPBL-204ENST00000504430 GCGRP47871 477 aa6.91□□□□□ -1.3
NIPBL-204ENST00000504430 IRX5P78411 483 aaPredicted RBP6.91□□□□□ -1.3
NIPBL-204ENST00000504430 PNMA3Q9UL41 463 aa6.91□□□□□ -1.3
NIPBL-204ENST00000504430 THRAP3Q9Y2W1 955 aaKnown RBP6.91□□□□□ -1.3
NIPBL-204ENST00000504430 GYS2P54840 703 aa6.91□□□□□ -1.3
NIPBL-204ENST00000504430 AMPD3Q01432 767 aa6.91□□□□□ -1.3
NIPBL-204ENST00000504430 DNAAF2Q9NVR5 837 aaKnown RBP6.91□□□□□ -1.3
NIPBL-204ENST00000504430 CEP126Q9P2H0 1117 aa6.91□□□□□ -1.3
NIPBL-204ENST00000504430 CHST12Q9NRB3 414 aa6.91□□□□□ -1.3
NIPBL-204ENST00000504430 ZBTB7BO15156 539 aaPredicted RBP6.9□□□□□ -1.3
NIPBL-204ENST00000504430 GALR2O43603 387 aaPredicted RBP6.9□□□□□ -1.3
NIPBL-204ENST00000504430 DNAJB2P25686 324 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms