RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 RTL1A6NKG5 1358 aa12.24□□□□□ -0.45
PDLIM5-207ENST00000503974 ILDR1Q86SU0 546 aaPredicted RBP12.23□□□□□ -0.45
PDLIM5-207ENST00000503974 ARHGEF25Q86VW2 580 aa12.23□□□□□ -0.45
PDLIM5-207ENST00000503974 NWD2Q9ULI1 1742 aa12.23□□□□□ -0.45
PDLIM5-207ENST00000503974 RALBP1Q15311 655 aa12.23□□□□□ -0.45
PDLIM5-207ENST00000503974 PRKRIP1Q9H875 184 aaPredicted RBP12.23□□□□□ -0.45
PDLIM5-207ENST00000503974 CCDC9Q9Y3X0 531 aaKnown RBP12.23□□□□□ -0.45
PDLIM5-207ENST00000503974 KIAA0232Q92628 1395 aa12.23□□□□□ -0.45
PDLIM5-207ENST00000503974 NRAPQ86VF7 1730 aa12.22□□□□□ -0.45
PDLIM5-207ENST00000503974 CDK12Q9NYV4 1490 aaPredicted RBP12.22□□□□□ -0.45
PDLIM5-207ENST00000503974 MAP3K19Q56UN5 1328 aa12.22□□□□□ -0.45
PDLIM5-207ENST00000503974 FAM193AP78312 1265 aa12.22□□□□□ -0.45
PDLIM5-207ENST00000503974 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.21□□□□□ -0.45
PDLIM5-207ENST00000503974 SLIT2O94813 1529 aa12.21□□□□□ -0.45
PDLIM5-207ENST00000503974 ANP32BQ92688 251 aaKnown RBP12.21□□□□□ -0.45
PDLIM5-207ENST00000503974 POLKQ9UBT6 870 aa12.21□□□□□ -0.45
PDLIM5-207ENST00000503974 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.21□□□□□ -0.45
PDLIM5-207ENST00000503974 BLMP54132 1417 aaPredicted RBP12.21□□□□□ -0.46
PDLIM5-207ENST00000503974 KIF20AO95235 890 aa12.2□□□□□ -0.46
PDLIM5-207ENST00000503974 FBLN1P23142 703 aa12.2□□□□□ -0.46
PDLIM5-207ENST00000503974 L1TD1Q5T7N2 865 aaKnown RBP12.2□□□□□ -0.46
PDLIM5-207ENST00000503974 HDAC5Q9UQL6 1122 aa12.2□□□□□ -0.46
PDLIM5-207ENST00000503974 RGPD5Q99666 1765 aa12.2□□□□□ -0.46
PDLIM5-207ENST00000503974 INSRP06213 1382 aa12.2□□□□□ -0.46
PDLIM5-207ENST00000503974 FLT4P35916 1363 aa12.2□□□□□ -0.46
PDLIM5-207ENST00000503974 CAMTA1Q9Y6Y1 1673 aa12.2□□□□□ -0.46
PDLIM5-207ENST00000503974 ZC3H6P61129 1189 aaKnown RBP12.2□□□□□ -0.46
PDLIM5-207ENST00000503974 COL3A1P02461 1466 aaPredicted RBP12.2□□□□□ -0.46
PDLIM5-207ENST00000503974 PPP2R1AP30153 589 aa12.19□□□□□ -0.46
PDLIM5-207ENST00000503974 PSEN1P49768 467 aa12.19□□□□□ -0.46
PDLIM5-207ENST00000503974 RRS1Q15050 365 aaKnown RBP12.19□□□□□ -0.46
PDLIM5-207ENST00000503974 TMED8Q6PL24 325 aaPredicted RBP12.19□□□□□ -0.46
PDLIM5-207ENST00000503974 EMILIN1Q9Y6C2 1016 aa12.19□□□□□ -0.46
PDLIM5-207ENST00000503974 FAM208AQ9UK61 1670 aaKnown RBP12.19□□□□□ -0.46
PDLIM5-207ENST00000503974 MYBBP1AQ9BQG0 1328 aaKnown RBP12.19□□□□□ -0.46
PDLIM5-207ENST00000503974 NUTM2BA6NNL0 878 aaPredicted RBP12.18□□□□□ -0.46
PDLIM5-207ENST00000503974 NUTM2EB1AL46 878 aaPredicted RBP12.18□□□□□ -0.46
PDLIM5-207ENST00000503974 SOX12O15370 315 aa12.18□□□□□ -0.46
PDLIM5-207ENST00000503974 NUTM2AQ8IVF1 878 aaPredicted RBP12.18□□□□□ -0.46
PDLIM5-207ENST00000503974 PRDM11Q9NQV5 511 aa12.18□□□□□ -0.46
PDLIM5-207ENST00000503974 COL5A2P05997 1499 aaPredicted RBP12.18□□□□□ -0.46
PDLIM5-207ENST00000503974 FAM83GA6ND36 823 aa12.18□□□□□ -0.46
PDLIM5-207ENST00000503974 PTMAP06454 111 aaKnown RBP12.18□□□□□ -0.46
PDLIM5-207ENST00000503974 TNNT2P45379 298 aaPredicted RBP12.18□□□□□ -0.46
PDLIM5-207ENST00000503974 IP6K1Q92551 441 aa12.18□□□□□ -0.46
PDLIM5-207ENST00000503974 ANP32CO43423 234 aa12.17□□□□□ -0.46
PDLIM5-207ENST00000503974 HOXC9P31274 260 aa12.17□□□□□ -0.46
PDLIM5-207ENST00000503974 ADAMTS2O95450 1211 aa12.17□□□□□ -0.46
PDLIM5-207ENST00000503974 TAF3Q5VWG9 929 aa12.17□□□□□ -0.46
PDLIM5-207ENST00000503974 FNBP4Q8N3X1 1017 aaPredicted RBP12.17□□□□□ -0.46
PDLIM5-207ENST00000503974 ZNF622Q969S3 477 aaKnown RBP eCLIP12.17□□□□□ -0.46
PDLIM5-207ENST00000503974 RGPD1P0DJD0 1748 aa12.16□□□□□ -0.46
PDLIM5-207ENST00000503974 ZSCAN20P17040 1043 aaPredicted RBP12.16□□□□□ -0.46
PDLIM5-207ENST00000503974 MTHFSP49914 203 aa12.16□□□□□ -0.46
PDLIM5-207ENST00000503974 CHRNA2Q15822 529 aa12.16□□□□□ -0.46
PDLIM5-207ENST00000503974 BCL9LQ86UU0 1499 aa12.16□□□□□ -0.46
PDLIM5-207ENST00000503974 AXIN2Q9Y2T1 843 aa12.15□□□□□ -0.46
PDLIM5-207ENST00000503974 AMPHP49418 695 aa12.15□□□□□ -0.46
PDLIM5-207ENST00000503974 ERBB3P21860 1342 aa12.14□□□□□ -0.47
PDLIM5-207ENST00000503974 AXDND1Q5T1B0 1012 aaPredicted RBP12.14□□□□□ -0.47
PDLIM5-207ENST00000503974 FAM43BQ6ZT52 329 aaPredicted RBP12.14□□□□□ -0.47
PDLIM5-207ENST00000503974 NCAPD2Q15021 1401 aa12.14□□□□□ -0.47
PDLIM5-207ENST00000503974 IGSF3O75054 1194 aa12.14□□□□□ -0.47
PDLIM5-207ENST00000503974 MYCNP04198 464 aaPredicted RBP12.14□□□□□ -0.47
PDLIM5-207ENST00000503974 HSP90AB2PQ58FF8 381 aa12.14□□□□□ -0.47
PDLIM5-207ENST00000503974 DNTTIP2Q5QJE6 756 aaKnown RBP12.14□□□□□ -0.47
PDLIM5-207ENST00000503974 C8orf37Q96NL8 207 aa12.14□□□□□ -0.47
PDLIM5-207ENST00000503974 GTPBP4Q9BZE4 634 aaKnown RBP12.14□□□□□ -0.47
PDLIM5-207ENST00000503974 PATL2C9JE40 543 aaKnown RBP12.13□□□□□ -0.47
PDLIM5-207ENST00000503974 BTG4Q9NY30 223 aa12.13□□□□□ -0.47
PDLIM5-207ENST00000503974 RGPD2P0DJD1 1756 aa12.12□□□□□ -0.47
PDLIM5-207ENST00000503974 MEX3CQ5U5Q3 659 aaKnown RBP12.12□□□□□ -0.47
PDLIM5-207ENST00000503974 WDR17Q8IZU2 1322 aa12.12□□□□□ -0.47
PDLIM5-207ENST00000503974 WNK3Q9BYP7 1800 aa12.12□□□□□ -0.47
PDLIM5-207ENST00000503974 ZBTB7CA1YPR0 619 aa12.12□□□□□ -0.47
PDLIM5-207ENST00000503974 ATRNO75882 1429 aa12.12□□□□□ -0.47
PDLIM5-207ENST00000503974 LETM1O95202 739 aaPredicted RBP12.12□□□□□ -0.47
PDLIM5-207ENST00000503974 RIPK4P57078 832 aa12.12□□□□□ -0.47
PDLIM5-207ENST00000503974 MAPK8IP2Q13387 824 aaPredicted RBP12.12□□□□□ -0.47
PDLIM5-207ENST00000503974 MTERF4Q7Z6M4 381 aaKnown RBP12.12□□□□□ -0.47
PDLIM5-207ENST00000503974 NGLY1Q96IV0 654 aa12.12□□□□□ -0.47
PDLIM5-207ENST00000503974 AFF2P51816 1311 aa12.12□□□□□ -0.47
PDLIM5-207ENST00000503974 CRB1P82279 1406 aa12.11□□□□□ -0.47
PDLIM5-207ENST00000503974 MCCP23508 829 aa12.11□□□□□ -0.47
PDLIM5-207ENST00000503974 TERF1P54274 439 aa12.11□□□□□ -0.47
PDLIM5-207ENST00000503974 SLC20A2Q08357 652 aa12.11□□□□□ -0.47
PDLIM5-207ENST00000503974 UNC5CLQ8IV45 518 aa12.11□□□□□ -0.47
PDLIM5-207ENST00000503974 ANKRD24Q8TF21 1146 aa12.11□□□□□ -0.47
PDLIM5-207ENST00000503974 IL13P35225 146 aa12.1□□□□□ -0.47
PDLIM5-207ENST00000503974 EIF4A2Q14240 407 aaKnown RBP12.1□□□□□ -0.47
PDLIM5-207ENST00000503974 CFAP53Q96M91 514 aa12.1□□□□□ -0.47
PDLIM5-207ENST00000503974 APPP05067 770 aa12.09□□□□□ -0.47
PDLIM5-207ENST00000503974 USP21Q9UK80 565 aa12.09□□□□□ -0.47
PDLIM5-207ENST00000503974 GLI3P10071 1580 aa12.09□□□□□ -0.47
PDLIM5-207ENST00000503974 IGSF1Q8N6C5 1336 aa12.09□□□□□ -0.47
PDLIM5-207ENST00000503974 PTMSP20962 102 aa12.09□□□□□ -0.47
PDLIM5-207ENST00000503974 VPS72Q15906 364 aa12.09□□□□□ -0.47
PDLIM5-207ENST00000503974 ZNF592Q92610 1267 aa12.09□□□□□ -0.47
PDLIM5-207ENST00000503974 ARID3AQ99856 593 aa12.09□□□□□ -0.47
PDLIM5-207ENST00000503974 PLCD4Q9BRC7 762 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms