RNA–Protein interactions for RNA: ENST00000503114.1

TRIM41-203, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 1,904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-203ENST00000503114 MAP3K19Q56UN5 1328 aa23.85■■□□□ 1.41
TRIM41-203ENST00000503114 KDRP35968 1356 aa23.85■■□□□ 1.41
TRIM41-203ENST00000503114 ATP10DQ9P241 1426 aa23.85■■□□□ 1.41
TRIM41-203ENST00000503114 NCOA3Q9Y6Q9 1424 aa23.85■■□□□ 1.41
TRIM41-203ENST00000503114 MCM10Q7L590 875 aa23.84■■□□□ 1.41
TRIM41-203ENST00000503114 LRRC37A3O60309 1634 aa23.83■■□□□ 1.41
TRIM41-203ENST00000503114 PTPRCP08575 1304 aa23.83■■□□□ 1.41
TRIM41-203ENST00000503114 KRT24Q2M2I5 525 aa23.82■■□□□ 1.4
TRIM41-203ENST00000503114 SNX21Q969T3 373 aa23.82■■□□□ 1.4
TRIM41-203ENST00000503114 HSCBQ8IWL3 235 aa23.82■■□□□ 1.4
TRIM41-203ENST00000503114 DCTPP1Q9H773 170 aa23.82■■□□□ 1.4
TRIM41-203ENST00000503114 ANKARQ7Z5J8 1434 aa23.81■■□□□ 1.4
TRIM41-203ENST00000503114 CEP170BQ9Y4F5 1589 aaPredicted RBP23.8■■□□□ 1.4
TRIM41-203ENST00000503114 ANKRD44Q8N8A2 993 aa23.8■■□□□ 1.4
TRIM41-203ENST00000503114 CHMP5Q9NZZ3 219 aa23.8■■□□□ 1.4
TRIM41-203ENST00000503114 IGSF1Q8N6C5 1336 aa23.79■■□□□ 1.4
TRIM41-203ENST00000503114 TBC1D9Q6ZT07 1266 aa23.78■■□□□ 1.4
TRIM41-203ENST00000503114 IL27Q8NEV9 243 aa23.78■■□□□ 1.4
TRIM41-203ENST00000503114 MSH6P52701 1360 aa23.78■■□□□ 1.4
TRIM41-203ENST00000503114 RPAP2Q8IXW5 612 aaPredicted RBP23.77■■□□□ 1.4
TRIM41-203ENST00000503114 MTHFSDQ2M296 383 aaKnown RBP23.76■■□□□ 1.39
TRIM41-203ENST00000503114 RTL1A6NKG5 1358 aa23.76■■□□□ 1.39
TRIM41-203ENST00000503114 SOX12O15370 315 aa23.76■■□□□ 1.39
TRIM41-203ENST00000503114 DDIT3P35638 169 aa23.76■■□□□ 1.39
TRIM41-203ENST00000503114 PLEKHM2Q8IWE5 1019 aa23.76■■□□□ 1.39
TRIM41-203ENST00000503114 SPRYD3Q8NCJ5 442 aa23.76■■□□□ 1.39
TRIM41-203ENST00000503114 NGDNQ8NEJ9 315 aaKnown RBP23.76■■□□□ 1.39
TRIM41-203ENST00000503114 KIF2CQ99661 725 aa23.76■■□□□ 1.39
TRIM41-203ENST00000503114 THEMISQ8N1K5 641 aaPredicted RBP23.75■■□□□ 1.39
TRIM41-203ENST00000503114 FAM208AQ9UK61 1670 aaKnown RBP23.75■■□□□ 1.39
TRIM41-203ENST00000503114 CEP85Q6P2H3 762 aa23.74■■□□□ 1.39
TRIM41-203ENST00000503114 CACNA1FO60840 1977 aa23.74■■□□□ 1.39
TRIM41-203ENST00000503114 NWD1Q149M9 1564 aa23.74■■□□□ 1.39
TRIM41-203ENST00000503114 CDC45O75419 566 aa23.74■■□□□ 1.39
TRIM41-203ENST00000503114 GSPT1P15170 499 aaKnown RBP23.74■■□□□ 1.39
TRIM41-203ENST00000503114 FOXO3O43524 673 aa23.73■■□□□ 1.39
TRIM41-203ENST00000503114 MCM4P33991 863 aa23.73■■□□□ 1.39
TRIM41-203ENST00000503114 EYA1Q99502 592 aa23.73■■□□□ 1.39
TRIM41-203ENST00000503114 N4BP2Q86UW6 1770 aaPredicted RBP23.73■■□□□ 1.39
TRIM41-203ENST00000503114 GAS2L2Q8NHY3 880 aa23.72■■□□□ 1.39
TRIM41-203ENST00000503114 RTF1Q92541 710 aaKnown RBP23.72■■□□□ 1.39
TRIM41-203ENST00000503114 AMPHP49418 695 aa23.72■■□□□ 1.39
TRIM41-203ENST00000503114 BRPF3Q9ULD4 1205 aa23.72■■□□□ 1.39
TRIM41-203ENST00000503114 HTATSF1O43719 755 aaKnown RBP23.71■■□□□ 1.39
TRIM41-203ENST00000503114 EIF5BO60841 1220 aaKnown RBP23.71■■□□□ 1.39
TRIM41-203ENST00000503114 TSPYL4Q9UJ04 414 aa23.71■■□□□ 1.39
TRIM41-203ENST00000503114 TTC22Q5TAA0 569 aa23.71■■□□□ 1.39
TRIM41-203ENST00000503114 SLC4A2P04920 1241 aa23.7■■□□□ 1.38
TRIM41-203ENST00000503114 MEIS3Q99687 375 aa23.7■■□□□ 1.38
TRIM41-203ENST00000503114 MIS18AQ9NYP9 233 aa23.69■■□□□ 1.38
TRIM41-203ENST00000503114 CIZ1Q9ULV3 898 aaPredicted RBP23.67■■□□□ 1.38
TRIM41-203ENST00000503114 LTN1O94822 1766 aa23.66■■□□□ 1.38
TRIM41-203ENST00000503114 CHD2O14647 1828 aaKnown RBP23.66■■□□□ 1.38
TRIM41-203ENST00000503114 HOXC9P31274 260 aa23.66■■□□□ 1.38
TRIM41-203ENST00000503114 NLRP6P59044 892 aa23.66■■□□□ 1.38
TRIM41-203ENST00000503114 KCNA6P17658 529 aa23.65■■□□□ 1.38
TRIM41-203ENST00000503114 TRHP20396 242 aaPredicted RBP23.65■■□□□ 1.38
TRIM41-203ENST00000503114 CCT4P50991 539 aaKnown RBP23.65■■□□□ 1.38
TRIM41-203ENST00000503114 G2E3Q7L622 706 aa23.65■■□□□ 1.38
TRIM41-203ENST00000503114 C16orf71Q8IYS4 520 aaPredicted RBP23.65■■□□□ 1.38
TRIM41-203ENST00000503114 HSP90AB1P08238 724 aaKnown RBP23.63■■□□□ 1.37
TRIM41-203ENST00000503114 TUBGCP6Q96RT7 1819 aa23.63■■□□□ 1.37
TRIM41-203ENST00000503114 SOS1Q07889 1333 aaPredicted RBP23.63■■□□□ 1.37
TRIM41-203ENST00000503114 GNAT3A8MTJ3 354 aa23.62■■□□□ 1.37
TRIM41-203ENST00000503114 HMMRO75330 724 aa23.62■■□□□ 1.37
TRIM41-203ENST00000503114 CD2BP2O95400 341 aaKnown RBP23.62■■□□□ 1.37
TRIM41-203ENST00000503114 OTUD7AQ8TE49 926 aaPredicted RBP23.62■■□□□ 1.37
TRIM41-203ENST00000503114 MAP3K5Q99683 1374 aa23.61■■□□□ 1.37
TRIM41-203ENST00000503114 K7ELQ4 463 aaPredicted RBP23.61■■□□□ 1.37
TRIM41-203ENST00000503114 DDX11L8A8MPP1 907 aa23.61■■□□□ 1.37
TRIM41-203ENST00000503114 PLPPR3Q6T4P5 718 aa23.61■■□□□ 1.37
TRIM41-203ENST00000503114 BABAM1Q9NWV8 329 aa23.61■■□□□ 1.37
TRIM41-203ENST00000503114 ZNF142P52746 1687 aaPredicted RBP23.61■■□□□ 1.37
TRIM41-203ENST00000503114 F6X3S4 739 aa23.6■■□□□ 1.37
TRIM41-203ENST00000503114 L1TD1Q5T7N2 865 aaKnown RBP23.6■■□□□ 1.37
TRIM41-203ENST00000503114 STK31Q9BXU1 1019 aa23.59■■□□□ 1.37
TRIM41-203ENST00000503114 RAB3GAP1Q15042 981 aa23.59■■□□□ 1.37
TRIM41-203ENST00000503114 PXDNLA1KZ92 1463 aa23.58■■□□□ 1.37
TRIM41-203ENST00000503114 SMARCA5O60264 1052 aaPredicted RBP23.58■■□□□ 1.37
TRIM41-203ENST00000503114 CCDC30Q5VVM6 783 aa23.58■■□□□ 1.37
TRIM41-203ENST00000503114 RBM42Q9BTD8 480 aaKnown RBP23.58■■□□□ 1.37
TRIM41-203ENST00000503114 TRAK2O60296 914 aa23.57■■□□□ 1.36
TRIM41-203ENST00000503114 SDSP20132 328 aa23.57■■□□□ 1.36
TRIM41-203ENST00000503114 SLC4A10Q6U841 1118 aa23.57■■□□□ 1.36
TRIM41-203ENST00000503114 USP26Q9BXU7 913 aa23.57■■□□□ 1.36
TRIM41-203ENST00000503114 OSBPL3Q9H4L5 887 aa23.57■■□□□ 1.36
TRIM41-203ENST00000503114 NFAT5O94916 1531 aa23.57■■□□□ 1.36
TRIM41-203ENST00000503114 PHRF1Q9P1Y6 1649 aaKnown RBP23.57■■□□□ 1.36
TRIM41-203ENST00000503114 RABEP1Q15276 862 aa23.57■■□□□ 1.36
TRIM41-203ENST00000503114 ABTB2Q8N961 1025 aa23.57■■□□□ 1.36
TRIM41-203ENST00000503114 MED1Q15648 1581 aaPredicted RBP23.56■■□□□ 1.36
TRIM41-203ENST00000503114 FSD2A1L4K1 749 aa23.56■■□□□ 1.36
TRIM41-203ENST00000503114 FLIIQ13045 1269 aa23.56■■□□□ 1.36
TRIM41-203ENST00000503114 TNPO1Q92973 898 aaKnown RBP23.56■■□□□ 1.36
TRIM41-203ENST00000503114 GNAI2P04899 355 aa23.55■■□□□ 1.36
TRIM41-203ENST00000503114 NUTM2GQ5VZR2 741 aa23.55■■□□□ 1.36
TRIM41-203ENST00000503114 IL17REQ8NFR9 667 aa23.55■■□□□ 1.36
TRIM41-203ENST00000503114 CASC1Q6TDU7 716 aa23.53■■□□□ 1.36
TRIM41-203ENST00000503114 RTN4Q9NQC3 1192 aaKnown RBP23.53■■□□□ 1.36
TRIM41-203ENST00000503114 KDM3BQ7LBC6 1761 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms