RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 RGS12O14924 1447 aa30.21■■■□□ 2.43
DDX41-202ENST00000503078 AK9Q5TCS8 1911 aa30.21■■■□□ 2.43
DDX41-202ENST00000503078 NASPP49321 788 aaPredicted RBP30.21■■■□□ 2.43
DDX41-202ENST00000503078 PPP1R9BQ96SB3 815 aa30.21■■■□□ 2.43
DDX41-202ENST00000503078 CPS1P31327 1500 aa30.21■■■□□ 2.43
DDX41-202ENST00000503078 MON2Q7Z3U7 1717 aa30.2■■■□□ 2.43
DDX41-202ENST00000503078 CYP2E1P05181 493 aaPredicted RBP30.2■■■□□ 2.42
DDX41-202ENST00000503078 CEP85Q6P2H3 762 aa30.2■■■□□ 2.42
DDX41-202ENST00000503078 CASC1Q6TDU7 716 aa30.19■■■□□ 2.42
DDX41-202ENST00000503078 OTUD7AQ8TE49 926 aaPredicted RBP30.19■■■□□ 2.42
DDX41-202ENST00000503078 SDSP20132 328 aa30.18■■■□□ 2.42
DDX41-202ENST00000503078 NUDT16Q96DE0 195 aaKnown RBP30.18■■■□□ 2.42
DDX41-202ENST00000503078 MCTP1Q6DN14 999 aa30.17■■■□□ 2.42
DDX41-202ENST00000503078 CWC22Q9HCG8 908 aaKnown RBP30.17■■■□□ 2.42
DDX41-202ENST00000503078 RTL1A6NKG5 1358 aa30.16■■■□□ 2.42
DDX41-202ENST00000503078 ANP32BQ92688 251 aaKnown RBP30.16■■■□□ 2.42
DDX41-202ENST00000503078 ZNF445P59923 1031 aa30.15■■■□□ 2.42
DDX41-202ENST00000503078 CCDC61Q9Y6R9 512 aa30.15■■■□□ 2.42
DDX41-202ENST00000503078 NRKQ7Z2Y5 1582 aa30.15■■■□□ 2.42
DDX41-202ENST00000503078 MSH6P52701 1360 aa30.15■■■□□ 2.42
DDX41-202ENST00000503078 CHL1O00533 1208 aa30.14■■■□□ 2.42
DDX41-202ENST00000503078 ESF1Q9H501 851 aaKnown RBP30.14■■■□□ 2.42
DDX41-202ENST00000503078 PTPRCP08575 1304 aa30.14■■■□□ 2.42
DDX41-202ENST00000503078 C3P01024 1663 aa30.14■■■□□ 2.42
DDX41-202ENST00000503078 ST18O60284 1047 aa30.14■■■□□ 2.42
DDX41-202ENST00000503078 KRT24Q2M2I5 525 aa30.14■■■□□ 2.42
DDX41-202ENST00000503078 KIAA0232Q92628 1395 aa30.14■■■□□ 2.41
DDX41-202ENST00000503078 LMBRD1Q9NUN5 540 aa30.13■■■□□ 2.41
DDX41-202ENST00000503078 SMARCA5O60264 1052 aaPredicted RBP30.13■■■□□ 2.41
DDX41-202ENST00000503078 NCKAP5LQ9HCH0 1330 aa30.12■■■□□ 2.41
DDX41-202ENST00000503078 AKAP12Q02952 1782 aa30.12■■■□□ 2.41
DDX41-202ENST00000503078 AEBP1Q8IUX7 1158 aa30.12■■■□□ 2.41
DDX41-202ENST00000503078 REC8O95072 547 aa30.11■■■□□ 2.41
DDX41-202ENST00000503078 NRXN3Q9Y4C0 1643 aa30.11■■■□□ 2.41
DDX41-202ENST00000503078 SULT6B1Q6IMI4 303 aa30.11■■■□□ 2.41
DDX41-202ENST00000503078 PKP1Q13835 747 aa30.1■■■□□ 2.41
DDX41-202ENST00000503078 MEIS3Q99687 375 aa30.1■■■□□ 2.41
DDX41-202ENST00000503078 ITSN1Q15811 1721 aa30.1■■■□□ 2.41
DDX41-202ENST00000503078 EIF4A2Q14240 407 aaKnown RBP30.1■■■□□ 2.41
DDX41-202ENST00000503078 METP08581 1390 aa30.09■■■□□ 2.41
DDX41-202ENST00000503078 APBB1O00213 710 aa30.09■■■□□ 2.41
DDX41-202ENST00000503078 CAVIN1Q6NZI2 390 aaKnown RBP30.09■■■□□ 2.41
DDX41-202ENST00000503078 TXNDC2Q86VQ3 553 aa30.09■■■□□ 2.41
DDX41-202ENST00000503078 NCLP19338 710 aaKnown RBP30.08■■■□□ 2.41
DDX41-202ENST00000503078 ZSCAN23Q3MJ62 389 aa30.08■■■□□ 2.41
DDX41-202ENST00000503078 ZSCAN30Q86W11 494 aa30.08■■■□□ 2.41
DDX41-202ENST00000503078 MCM10Q7L590 875 aa30.07■■■□□ 2.4
DDX41-202ENST00000503078 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.07■■■□□ 2.4
DDX41-202ENST00000503078 ZGPATQ8N5A5 531 aaKnown RBP30.06■■■□□ 2.4
DDX41-202ENST00000503078 ERC2O15083 957 aa30.06■■■□□ 2.4
DDX41-202ENST00000503078 RRP9O43818 475 aaKnown RBP30.06■■■□□ 2.4
DDX41-202ENST00000503078 HMMRO75330 724 aa30.05■■■□□ 2.4
DDX41-202ENST00000503078 HSP90AA2PQ14568 343 aaPredicted RBP30.04■■■□□ 2.4
DDX41-202ENST00000503078 SIRT1Q96EB6 747 aa30.04■■■□□ 2.4
DDX41-202ENST00000503078 TNRQ92752 1358 aa30.03■■■□□ 2.4
DDX41-202ENST00000503078 OSBPL3Q9H4L5 887 aa30.03■■■□□ 2.4
DDX41-202ENST00000503078 SLC4A2P04920 1241 aa30.02■■■□□ 2.4
DDX41-202ENST00000503078 ZDHHC9Q9Y397 364 aa30.02■■■□□ 2.4
DDX41-202ENST00000503078 PRPF40AO75400 957 aaKnown RBP30.01■■■□□ 2.39
DDX41-202ENST00000503078 TPM2P07951 284 aa30.01■■■□□ 2.39
DDX41-202ENST00000503078 TECPR2O15040 1411 aa30.01■■■□□ 2.39
DDX41-202ENST00000503078 PRR36Q9H6K5 1346 aa30■■■□□ 2.39
DDX41-202ENST00000503078 CRB1P82279 1406 aa29.99■■■□□ 2.39
DDX41-202ENST00000503078 PDE1AP54750 535 aa29.99■■■□□ 2.39
DDX41-202ENST00000503078 GPT2Q8TD30 523 aa29.99■■■□□ 2.39
DDX41-202ENST00000503078 RBSNQ9H1K0 784 aa29.99■■■□□ 2.39
DDX41-202ENST00000503078 MSNP26038 577 aaKnown RBP29.98■■■□□ 2.39
DDX41-202ENST00000503078 HS1BP3Q53T59 392 aa29.98■■■□□ 2.39
DDX41-202ENST00000503078 GLIPR1L2Q4G1C9 344 aa29.98■■■□□ 2.39
DDX41-202ENST00000503078 TTC21BQ7Z4L5 1316 aa29.96■■■□□ 2.39
DDX41-202ENST00000503078 CCT4P50991 539 aaKnown RBP29.96■■■□□ 2.39
DDX41-202ENST00000503078 HDGFP51858 240 aaKnown RBP29.96■■■□□ 2.39
DDX41-202ENST00000503078 UBR1Q8IWV7 1749 aa29.96■■■□□ 2.39
DDX41-202ENST00000503078 PRIM1P49642 420 aaKnown RBP29.96■■■□□ 2.39
DDX41-202ENST00000503078 RGPD1P0DJD0 1748 aa29.95■■■□□ 2.39
DDX41-202ENST00000503078 OVOS2A0A0J9YW53 1432 aa29.94■■■□□ 2.38
DDX41-202ENST00000503078 OVOS2Q6IE36 1432 aa29.94■■■□□ 2.38
DDX41-202ENST00000503078 PDLIM2Q96JY6 352 aa29.94■■■□□ 2.38
DDX41-202ENST00000503078 TMEM2Q9UHN6 1383 aa29.94■■■□□ 2.38
DDX41-202ENST00000503078 OFD1O75665 1012 aa29.93■■■□□ 2.38
DDX41-202ENST00000503078 SLC4A10Q6U841 1118 aa29.93■■■□□ 2.38
DDX41-202ENST00000503078 RBM27Q9P2N5 1060 aaKnown RBP29.93■■■□□ 2.38
DDX41-202ENST00000503078 HSP90AB2PQ58FF8 381 aa29.93■■■□□ 2.38
DDX41-202ENST00000503078 KIAA1211Q6ZU35 1233 aa29.93■■■□□ 2.38
DDX41-202ENST00000503078 NEK4P51957 841 aa29.92■■■□□ 2.38
DDX41-202ENST00000503078 G2E3Q7L622 706 aa29.92■■■□□ 2.38
DDX41-202ENST00000503078 PEAK1Q9H792 1746 aa29.92■■■□□ 2.38
DDX41-202ENST00000503078 MCM2P49736 904 aa29.92■■■□□ 2.38
DDX41-202ENST00000503078 F6X3S4 739 aa29.91■■■□□ 2.38
DDX41-202ENST00000503078 TMX3Q96JJ7 454 aa29.91■■■□□ 2.38
DDX41-202ENST00000503078 MIS18AQ9NYP9 233 aa29.91■■■□□ 2.38
DDX41-202ENST00000503078 GNAI2P04899 355 aa29.9■■■□□ 2.38
DDX41-202ENST00000503078 LRSAM1Q6UWE0 723 aa29.9■■■□□ 2.38
DDX41-202ENST00000503078 SALL3Q9BXA9 1300 aa29.89■■■□□ 2.38
DDX41-202ENST00000503078 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.89■■■□□ 2.38
DDX41-202ENST00000503078 ESYT1Q9BSJ8 1104 aa29.89■■■□□ 2.38
DDX41-202ENST00000503078 TMEM63CQ9P1W3 806 aa29.89■■■□□ 2.38
DDX41-202ENST00000503078 TSPYL4Q9UJ04 414 aa29.89■■■□□ 2.38
DDX41-202ENST00000503078 NOL7Q9UMY1 257 aaKnown RBP29.89■■■□□ 2.37
DDX41-202ENST00000503078 NALCNQ8IZF0 1738 aa29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 167.8 ms