RNA–Protein interactions for RNA: ENST00000502816.1

TRIO-204, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 736 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-204ENST00000502816 USHBP1Q8N6Y0 703 aa34.03■■■■□ 3.04
TRIO-204ENST00000502816 KNSTRNQ9Y448 316 aa34.03■■■■□ 3.04
TRIO-204ENST00000502816 LRP5O75197 1615 aa34.03■■■■□ 3.04
TRIO-204ENST00000502816 NBPF14Q5TI25 921 aa34.02■■■■□ 3.04
TRIO-204ENST00000502816 DDX54Q8TDD1 881 aaKnown RBP34.02■■■■□ 3.04
TRIO-204ENST00000502816 PPM1GO15355 546 aaPredicted RBP34.01■■■■□ 3.03
TRIO-204ENST00000502816 RAPGEF4Q8WZA2 1011 aa34.01■■■■□ 3.03
TRIO-204ENST00000502816 BTAF1O14981 1849 aa34.01■■■■□ 3.03
TRIO-204ENST00000502816 PER1O15534 1290 aaPredicted RBP34■■■■□ 3.03
TRIO-204ENST00000502816 AMER1Q5JTC6 1135 aaPredicted RBP34■■■■□ 3.03
TRIO-204ENST00000502816 ACSBG1Q96GR2 724 aa34■■■■□ 3.03
TRIO-204ENST00000502816 TATP17735 454 aaPredicted RBP33.99■■■■□ 3.03
TRIO-204ENST00000502816 KAT6BQ8WYB5 2073 aa33.97■■■■□ 3.03
TRIO-204ENST00000502816 TNNT2P45379 298 aaPredicted RBP33.96■■■■□ 3.03
TRIO-204ENST00000502816 MORC1Q86VD1 984 aa33.96■■■■□ 3.03
TRIO-204ENST00000502816 EYA1Q99502 592 aa33.96■■■■□ 3.03
TRIO-204ENST00000502816 PKD1L3Q7Z443 1732 aa33.96■■■■□ 3.03
TRIO-204ENST00000502816 TXNRD1Q16881 649 aa33.95■■■■□ 3.03
TRIO-204ENST00000502816 DOT1LQ8TEK3 1739 aa33.94■■■■□ 3.02
TRIO-204ENST00000502816 EIF4A2Q14240 407 aaKnown RBP33.93■■■■□ 3.02
TRIO-204ENST00000502816 PLEKHG2Q9H7P9 1386 aa33.91■■■■□ 3.02
TRIO-204ENST00000502816 PCDH11XQ9BZA7 1347 aa33.9■■■■□ 3.02
TRIO-204ENST00000502816 PCDH11YQ9BZA8 1340 aa33.9■■■■□ 3.02
TRIO-204ENST00000502816 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.88■■■■□ 3.014e-7■■□□□ 11.9
TRIO-204ENST00000502816 PRIM1P49642 420 aaKnown RBP33.87■■■■□ 3.01
TRIO-204ENST00000502816 ANO8Q9HCE9 1232 aaPredicted RBP33.87■■■■□ 3.01
TRIO-204ENST00000502816 NPC1L1Q9UHC9 1359 aa33.86■■■■□ 3.01
TRIO-204ENST00000502816 IGSF1Q8N6C5 1336 aa33.86■■■■□ 3.01
TRIO-204ENST00000502816 CYP27B1O15528 508 aa33.85■■■■□ 3.01
TRIO-204ENST00000502816 PAPPAQ13219 1627 aa33.84■■■■□ 3.01
TRIO-204ENST00000502816 LY75O60449 1722 aa33.83■■■■□ 3.01
TRIO-204ENST00000502816 NKX1-1Q15270 411 aaPredicted RBP33.83■■■■□ 3.01
TRIO-204ENST00000502816 CASZ1Q86V15 1759 aa33.82■■■■□ 3
TRIO-204ENST00000502816 SPG7Q9UQ90 795 aa33.81■■■■□ 3
TRIO-204ENST00000502816 SLC27A3Q5K4L6 730 aa33.79■■■■□ 3
TRIO-204ENST00000502816 SLC15A2Q16348 729 aa33.78■■■■□ 3
TRIO-204ENST00000502816 SYTL4Q96C24 671 aaPredicted RBP33.78■■■■□ 3
TRIO-204ENST00000502816 TOGARAM1Q9Y4F4 1720 aa33.78■■■■□ 3
TRIO-204ENST00000502816 LRRC4BQ9NT99 713 aa33.77■■■■□ 3
TRIO-204ENST00000502816 STK32BQ9NY57 414 aa33.77■■■■□ 3
TRIO-204ENST00000502816 ITGB4P16144 1822 aa33.76■■■■□ 3
TRIO-204ENST00000502816 IL13P35225 146 aa33.74■■■□□ 2.99
TRIO-204ENST00000502816 KDRP35968 1356 aa33.72■■■□□ 2.99
TRIO-204ENST00000502816 MTHFSP49914 203 aa33.71■■■□□ 2.99
TRIO-204ENST00000502816 CC2D1BQ5T0F9 858 aaKnown RBP33.71■■■□□ 2.99
TRIO-204ENST00000502816 IFNL2Q8IZJ0 200 aa33.71■■■□□ 2.99
TRIO-204ENST00000502816 PHKG2P15735 406 aa33.7■■■□□ 2.99
TRIO-204ENST00000502816 QSER1Q2KHR3 1735 aa33.7■■■□□ 2.98
TRIO-204ENST00000502816 SPON1Q9HCB6 807 aa33.68■■■□□ 2.98
TRIO-204ENST00000502816 AKT1S1Q96B36 256 aa33.67■■■□□ 2.98
TRIO-204ENST00000502816 PDGFDQ9GZP0 370 aaPredicted RBP33.67■■■□□ 2.98
TRIO-204ENST00000502816 AMOTQ4VCS5 1084 aa33.65■■■□□ 2.98
TRIO-204ENST00000502816 ZNF827Q17R98 1081 aa33.64■■■□□ 2.98
TRIO-204ENST00000502816 PLEKHO1Q53GL0 409 aaPredicted RBP33.64■■■□□ 2.98
TRIO-204ENST00000502816 MPRIPQ6WCQ1 1025 aa33.64■■■□□ 2.98
TRIO-204ENST00000502816 AEBP1Q8IUX7 1158 aa33.63■■■□□ 2.97
TRIO-204ENST00000502816 SULT6B1Q6IMI4 303 aa33.62■■■□□ 2.97
TRIO-204ENST00000502816 PIGBQ92521 554 aa33.62■■■□□ 2.97
TRIO-204ENST00000502816 CCNL1Q9UK58 526 aaPredicted RBP33.61■■■□□ 2.97
TRIO-204ENST00000502816 HMGB2P26583 209 aaKnown RBP33.6■■■□□ 2.97
TRIO-204ENST00000502816 SMARCC1Q92922 1105 aaPredicted RBP33.6■■■□□ 2.97
TRIO-204ENST00000502816 HSP90AB1P08238 724 aaKnown RBP33.59■■■□□ 2.97
TRIO-204ENST00000502816 PALLDQ8WX93 1383 aa33.59■■■□□ 2.97
TRIO-204ENST00000502816 TAF1LQ8IZX4 1826 aa33.58■■■□□ 2.97
TRIO-204ENST00000502816 COL3A1P02461 1466 aaPredicted RBP33.58■■■□□ 2.97
TRIO-204ENST00000502816 KCNQ4P56696 695 aa33.58■■■□□ 2.97
TRIO-204ENST00000502816 TUBGCP6Q96RT7 1819 aa33.58■■■□□ 2.97
TRIO-204ENST00000502816 DCAF5Q96JK2 942 aa33.57■■■□□ 2.96
TRIO-204ENST00000502816 C5P01031 1676 aa33.56■■■□□ 2.96
TRIO-204ENST00000502816 DIAPH1O60610 1272 aaKnown RBP33.56■■■□□ 2.96
TRIO-204ENST00000502816 ERVV-2B6SEH9 535 aa33.55■■■□□ 2.96
TRIO-204ENST00000502816 MTFR1LQ9H019 292 aa33.55■■■□□ 2.96
TRIO-204ENST00000502816 ZBTB7AO95365 584 aa33.54■■■□□ 2.96
TRIO-204ENST00000502816 PTGER2P43116 358 aa33.54■■■□□ 2.96
TRIO-204ENST00000502816 TMOD3Q9NYL9 352 aa33.54■■■□□ 2.96
TRIO-204ENST00000502816 ZNF530Q6P9A1 599 aaPredicted RBP33.53■■■□□ 2.96
TRIO-204ENST00000502816 COL24A1Q17RW2 1714 aa33.53■■■□□ 2.96
TRIO-204ENST00000502816 SGIP1Q9BQI5 828 aa33.52■■■□□ 2.96
TRIO-204ENST00000502816 SLC16A10Q8TF71 515 aa33.51■■■□□ 2.95
TRIO-204ENST00000502816 KDM6AO15550 1401 aaPredicted RBP33.51■■■□□ 2.95
TRIO-204ENST00000502816 PNPLA7Q6ZV29 1317 aa33.51■■■□□ 2.95
TRIO-204ENST00000502816 TFCP2L1Q9NZI6 479 aa33.49■■■□□ 2.95
TRIO-204ENST00000502816 ATF5Q9Y2D1 282 aaPredicted RBP33.48■■■□□ 2.95
TRIO-204ENST00000502816 ASAP1Q9ULH1 1129 aa33.47■■■□□ 2.95
TRIO-204ENST00000502816 ZNF831Q5JPB2 1677 aa33.47■■■□□ 2.95
TRIO-204ENST00000502816 SCN11AQ9UI33 1791 aa33.47■■■□□ 2.95
TRIO-204ENST00000502816 C1orf141Q5JVX7 400 aa33.46■■■□□ 2.95
TRIO-204ENST00000502816 ATG3Q9NT62 314 aa33.46■■■□□ 2.95
TRIO-204ENST00000502816 PPP1R1BQ9UD71 204 aaPredicted RBP33.45■■■□□ 2.95
TRIO-204ENST00000502816 C4BP0C0L5 1744 aa33.45■■■□□ 2.94
TRIO-204ENST00000502816 LOC102724428A0A0B4J2F2 783 aa33.44■■■□□ 2.94
TRIO-204ENST00000502816 HMOX1P09601 288 aa33.44■■■□□ 2.94
TRIO-204ENST00000502816 SIK1P57059 783 aa33.44■■■□□ 2.94
TRIO-204ENST00000502816 CNGB1Q14028 1251 aaPredicted RBP33.44■■■□□ 2.94
TRIO-204ENST00000502816 AKAP4Q5JQC9 854 aa33.44■■■□□ 2.94
TRIO-204ENST00000502816 PPP2R1AP30153 589 aa33.42■■■□□ 2.94
TRIO-204ENST00000502816 ADAMTS7Q9UKP4 1686 aa33.4■■■□□ 2.94
TRIO-204ENST00000502816 CABP4P57796 275 aa33.39■■■□□ 2.94
TRIO-204ENST00000502816 UBR3Q6ZT12 1888 aa33.39■■■□□ 2.94
TRIO-204ENST00000502816 VIRMAQ69YN4 1812 aaKnown RBP33.39■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms