RNA–Protein interactions for RNA: ENST00000502751.5

LMNA-219, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-219ENST00000502751 POLKQ9UBT6 870 aa22.65■■□□□ 1.22
LMNA-219ENST00000502751 WASHC2AQ641Q2 1341 aa22.64■■□□□ 1.22
LMNA-219ENST00000502751 PRIM1P49642 420 aaKnown RBP22.64■■□□□ 1.21
LMNA-219ENST00000502751 KAT6BQ8WYB5 2073 aa22.64■■□□□ 1.21
LMNA-219ENST00000502751 NHSQ6T4R5 1651 aa22.63■■□□□ 1.21
LMNA-219ENST00000502751 TATP17735 454 aaPredicted RBP22.63■■□□□ 1.21
LMNA-219ENST00000502751 PDGFDQ9GZP0 370 aaPredicted RBP22.63■■□□□ 1.21
LMNA-219ENST00000502751 TNNT2P45379 298 aaPredicted RBP22.62■■□□□ 1.21
LMNA-219ENST00000502751 SLC15A2Q16348 729 aa22.62■■□□□ 1.21
LMNA-219ENST00000502751 STK32BQ9NY57 414 aa22.62■■□□□ 1.21
LMNA-219ENST00000502751 SPON1Q9HCB6 807 aa22.61■■□□□ 1.21
LMNA-219ENST00000502751 SYTL4Q96C24 671 aaPredicted RBP22.6■■□□□ 1.21
LMNA-219ENST00000502751 LRRC4BQ9NT99 713 aa22.6■■□□□ 1.21
LMNA-219ENST00000502751 EYA1Q99502 592 aa22.58■■□□□ 1.21
LMNA-219ENST00000502751 BTAF1O14981 1849 aa22.57■■□□□ 1.2
LMNA-219ENST00000502751 MAP2P11137 1827 aaKnown RBP22.55■■□□□ 1.2
LMNA-219ENST00000502751 NSD2O96028 1365 aa22.55■■□□□ 1.2
LMNA-219ENST00000502751 SLC27A3Q5K4L6 730 aa22.55■■□□□ 1.2
LMNA-219ENST00000502751 CYP27B1O15528 508 aa22.54■■□□□ 1.2
LMNA-219ENST00000502751 ZBTB7AO95365 584 aa22.54■■□□□ 1.2
LMNA-219ENST00000502751 KIF7Q2M1P5 1343 aa22.54■■□□□ 1.2
LMNA-219ENST00000502751 PCDH11XQ9BZA7 1347 aa22.54■■□□□ 1.2
LMNA-219ENST00000502751 PCDH11YQ9BZA8 1340 aa22.54■■□□□ 1.2
LMNA-219ENST00000502751 SHANK3Q9BYB0 1731 aa22.54■■□□□ 1.2
LMNA-219ENST00000502751 KCNQ4P56696 695 aa22.53■■□□□ 1.2
LMNA-219ENST00000502751 EIF4A2Q14240 407 aaKnown RBP22.53■■□□□ 1.2
LMNA-219ENST00000502751 NCAPD2Q15021 1401 aa22.52■■□□□ 1.2
LMNA-219ENST00000502751 ZNF827Q17R98 1081 aa22.52■■□□□ 1.2
LMNA-219ENST00000502751 MORC1Q86VD1 984 aa22.52■■□□□ 1.2
LMNA-219ENST00000502751 KNSTRNQ9Y448 316 aa22.52■■□□□ 1.2
LMNA-219ENST00000502751 AKT1S1Q96B36 256 aa22.51■■□□□ 1.19
LMNA-219ENST00000502751 PPP1R1BQ9UD71 204 aaPredicted RBP22.51■■□□□ 1.19
LMNA-219ENST00000502751 ATF5Q9Y2D1 282 aaPredicted RBP22.51■■□□□ 1.19
LMNA-219ENST00000502751 ANKRD26Q9UPS8 1709 aa22.5■■□□□ 1.19
LMNA-219ENST00000502751 CASZ1Q86V15 1759 aa22.49■■□□□ 1.19
LMNA-219ENST00000502751 PTGER2P43116 358 aa22.49■■□□□ 1.19
LMNA-219ENST00000502751 SPG7Q9UQ90 795 aa22.49■■□□□ 1.19
LMNA-219ENST00000502751 NKX1-1Q15270 411 aaPredicted RBP22.48■■□□□ 1.19
LMNA-219ENST00000502751 AMER1Q5JTC6 1135 aaPredicted RBP22.48■■□□□ 1.19
LMNA-219ENST00000502751 MPRIPQ6WCQ1 1025 aa22.48■■□□□ 1.19
LMNA-219ENST00000502751 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.48■■□□□ 1.19
LMNA-219ENST00000502751 PAPPAQ13219 1627 aa22.47■■□□□ 1.19
LMNA-219ENST00000502751 ZEB1P37275 1124 aaPredicted RBP22.47■■□□□ 1.19
LMNA-219ENST00000502751 MTFR1LQ9H019 292 aa22.47■■□□□ 1.19
LMNA-219ENST00000502751 DOT1LQ8TEK3 1739 aa22.47■■□□□ 1.19
LMNA-219ENST00000502751 CCNL1Q9UK58 526 aaPredicted RBP22.46■■□□□ 1.19
LMNA-219ENST00000502751 PER1O15534 1290 aaPredicted RBP22.45■■□□□ 1.18
LMNA-219ENST00000502751 IGSF1Q8N6C5 1336 aa22.44■■□□□ 1.18
LMNA-219ENST00000502751 SGIP1Q9BQI5 828 aa22.44■■□□□ 1.18
LMNA-219ENST00000502751 PIGBQ92521 554 aa22.43■■□□□ 1.18
LMNA-219ENST00000502751 TFCP2L1Q9NZI6 479 aa22.43■■□□□ 1.18
LMNA-219ENST00000502751 PHKG2P15735 406 aa22.42■■□□□ 1.18
LMNA-219ENST00000502751 IFNL2Q8IZJ0 200 aa22.42■■□□□ 1.18
LMNA-219ENST00000502751 PNPLA7Q6ZV29 1317 aa22.41■■□□□ 1.18
LMNA-219ENST00000502751 PKD1L3Q7Z443 1732 aa22.4■■□□□ 1.18
LMNA-219ENST00000502751 LY75O60449 1722 aa22.39■■□□□ 1.17
LMNA-219ENST00000502751 PALLDQ8WX93 1383 aa22.38■■□□□ 1.17
LMNA-219ENST00000502751 IL13P35225 146 aa22.38■■□□□ 1.17
LMNA-219ENST00000502751 SLC16A10Q8TF71 515 aa22.38■■□□□ 1.17
LMNA-219ENST00000502751 SMARCC1Q92922 1105 aaPredicted RBP22.38■■□□□ 1.17
LMNA-219ENST00000502751 AEBP1Q8IUX7 1158 aa22.37■■□□□ 1.17
LMNA-219ENST00000502751 MTHFSP49914 203 aa22.36■■□□□ 1.17
LMNA-219ENST00000502751 PLEKHO1Q53GL0 409 aaPredicted RBP22.36■■□□□ 1.17
LMNA-219ENST00000502751 CC2D1BQ5T0F9 858 aaKnown RBP22.36■■□□□ 1.17
LMNA-219ENST00000502751 ARXQ96QS3 562 aa22.36■■□□□ 1.17
LMNA-219ENST00000502751 SULT6B1Q6IMI4 303 aa22.35■■□□□ 1.17
LMNA-219ENST00000502751 SYT17Q9BSW7 474 aa22.35■■□□□ 1.17
LMNA-219ENST00000502751 FHDC1Q9C0D6 1143 aaPredicted RBP22.35■■□□□ 1.17
LMNA-219ENST00000502751 TMOD3Q9NYL9 352 aa22.35■■□□□ 1.17
LMNA-219ENST00000502751 PLEKHG2Q9H7P9 1386 aa22.35■■□□□ 1.17
LMNA-219ENST00000502751 COL23A1Q86Y22 540 aaPredicted RBP22.34■■□□□ 1.17
LMNA-219ENST00000502751 ASAP1Q9ULH1 1129 aa22.34■■□□□ 1.17
LMNA-219ENST00000502751 TOGARAM1Q9Y4F4 1720 aa22.34■■□□□ 1.17
LMNA-219ENST00000502751 AMOTQ4VCS5 1084 aa22.33■■□□□ 1.17
LMNA-219ENST00000502751 ITGB4P16144 1822 aa22.32■■□□□ 1.16
LMNA-219ENST00000502751 HMGB2P26583 209 aaKnown RBP22.32■■□□□ 1.16
LMNA-219ENST00000502751 ERVV-2B6SEH9 535 aa22.31■■□□□ 1.16
LMNA-219ENST00000502751 DCAF5Q96JK2 942 aa22.31■■□□□ 1.16
LMNA-219ENST00000502751 ATG3Q9NT62 314 aa22.31■■□□□ 1.16
LMNA-219ENST00000502751 LOC102724428A0A0B4J2F2 783 aa22.3■■□□□ 1.16
LMNA-219ENST00000502751 DCAF8L1A6NGE4 600 aa22.3■■□□□ 1.16
LMNA-219ENST00000502751 MSH5O43196 834 aa22.3■■□□□ 1.16
LMNA-219ENST00000502751 HSP90AB1P08238 724 aaKnown RBP22.3■■□□□ 1.16
LMNA-219ENST00000502751 SIK1P57059 783 aa22.3■■□□□ 1.16
LMNA-219ENST00000502751 ZNF530Q6P9A1 599 aaPredicted RBP22.3■■□□□ 1.16
LMNA-219ENST00000502751 CNGB1Q14028 1251 aaPredicted RBP22.29■■□□□ 1.16
LMNA-219ENST00000502751 KDRP35968 1356 aa22.28■■□□□ 1.16
LMNA-219ENST00000502751 POLD1P28340 1107 aa22.28■■□□□ 1.16
LMNA-219ENST00000502751 QSER1Q2KHR3 1735 aa22.28■■□□□ 1.16
LMNA-219ENST00000502751 NPC1L1Q9UHC9 1359 aa22.27■■□□□ 1.16
LMNA-219ENST00000502751 AMIGO3Q86WK7 504 aa22.27■■□□□ 1.16
LMNA-219ENST00000502751 ATP6V1AP38606 617 aa22.26■■□□□ 1.15
LMNA-219ENST00000502751 ITPK1Q13572 414 aa22.26■■□□□ 1.15
LMNA-219ENST00000502751 LINC00116Q8NCU8 138 aa22.26■■□□□ 1.15
LMNA-219ENST00000502751 FLAD1Q8NFF5 587 aa22.26■■□□□ 1.15
LMNA-219ENST00000502751 TUBGCP6Q96RT7 1819 aa22.26■■□□□ 1.15
LMNA-219ENST00000502751 C1orf141Q5JVX7 400 aa22.25■■□□□ 1.15
LMNA-219ENST00000502751 SMIM5Q71RC9 77 aa22.25■■□□□ 1.15
LMNA-219ENST00000502751 AK7Q96M32 723 aa22.25■■□□□ 1.15
LMNA-219ENST00000502751 DIAPH1O60610 1272 aaKnown RBP22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms