RNA–Protein interactions for RNA: ENST00000502548.5

RACK1-202, Transcript of receptor for activated C kinase 1, humanhuman

TSL 1 (best)

Gene RACK1, Length 1,090 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-202ENST00000502548 PEAK1Q9H792 1746 aa17.58■□□□□ 0.4
RACK1-202ENST00000502548 IGSF1Q8N6C5 1336 aa17.56■□□□□ 0.4
RACK1-202ENST00000502548 IL13P35225 146 aa17.56■□□□□ 0.4
RACK1-202ENST00000502548 PRIM1P49642 420 aaKnown RBP17.56■□□□□ 0.4
RACK1-202ENST00000502548 NBPF14Q5TI25 921 aa17.56■□□□□ 0.4
RACK1-202ENST00000502548 PROM2Q8N271 834 aa17.56■□□□□ 0.4
RACK1-202ENST00000502548 NCAPD2Q15021 1401 aa17.55■□□□□ 0.4
RACK1-202ENST00000502548 PCDH11XQ9BZA7 1347 aa17.55■□□□□ 0.4
RACK1-202ENST00000502548 PCDH11YQ9BZA8 1340 aa17.55■□□□□ 0.4
RACK1-202ENST00000502548 CYP27B1O15528 508 aa17.55■□□□□ 0.4
RACK1-202ENST00000502548 SYTL4Q96C24 671 aaPredicted RBP17.54■□□□□ 0.4
RACK1-202ENST00000502548 TXNRD1Q16881 649 aa17.53■□□□□ 0.4
RACK1-202ENST00000502548 FAM208AQ9UK61 1670 aaKnown RBP17.52■□□□□ 0.4
RACK1-202ENST00000502548 DIAPH1O60610 1272 aaKnown RBP17.52■□□□□ 0.4
RACK1-202ENST00000502548 R3HDM1Q15032 1099 aaKnown RBP17.52■□□□□ 0.4
RACK1-202ENST00000502548 NKX1-1Q15270 411 aaPredicted RBP17.52■□□□□ 0.4
RACK1-202ENST00000502548 PLEKHO1Q53GL0 409 aaPredicted RBP17.52■□□□□ 0.4
RACK1-202ENST00000502548 SULT6B1Q6IMI4 303 aa17.52■□□□□ 0.4
RACK1-202ENST00000502548 RGPD1P0DJD0 1748 aa17.52■□□□□ 0.39
RACK1-202ENST00000502548 PSDA5PKW4 1024 aaPredicted RBP17.51■□□□□ 0.39
RACK1-202ENST00000502548 AMOTQ4VCS5 1084 aa17.51■□□□□ 0.39
RACK1-202ENST00000502548 IFNL2Q8IZJ0 200 aa17.51■□□□□ 0.39
RACK1-202ENST00000502548 AEBP1Q8IUX7 1158 aa17.5■□□□□ 0.39
RACK1-202ENST00000502548 PLEKHG2Q9H7P9 1386 aa17.5■□□□□ 0.39
RACK1-202ENST00000502548 PHKG2P15735 406 aa17.49■□□□□ 0.39
RACK1-202ENST00000502548 ANKRD26Q9UPS8 1709 aa17.47■□□□□ 0.39
RACK1-202ENST00000502548 MAP2P11137 1827 aaKnown RBP17.47■□□□□ 0.39
RACK1-202ENST00000502548 WNK3Q9BYP7 1800 aa17.47■□□□□ 0.39
RACK1-202ENST00000502548 PPP2R1AP30153 589 aa17.47■□□□□ 0.39
RACK1-202ENST00000502548 DDX10Q13206 875 aaKnown RBP17.47■□□□□ 0.39
RACK1-202ENST00000502548 CFAP53Q96M91 514 aa17.47■□□□□ 0.39
RACK1-202ENST00000502548 TNS1Q9HBL0 1735 aaKnown RBP17.47■□□□□ 0.39
RACK1-202ENST00000502548 KDRP35968 1356 aa17.46■□□□□ 0.39
RACK1-202ENST00000502548 HSP90AB1P08238 724 aaKnown RBP17.46■□□□□ 0.39
RACK1-202ENST00000502548 SLC27A3Q5K4L6 730 aa17.46■□□□□ 0.39
RACK1-202ENST00000502548 MPRIPQ6WCQ1 1025 aa17.46■□□□□ 0.39
RACK1-202ENST00000502548 HMOX1P09601 288 aa17.44■□□□□ 0.38
RACK1-202ENST00000502548 ZNF530Q6P9A1 599 aaPredicted RBP17.44■□□□□ 0.38
RACK1-202ENST00000502548 LRRC4BQ9NT99 713 aa17.44■□□□□ 0.38
RACK1-202ENST00000502548 STK32BQ9NY57 414 aa17.44■□□□□ 0.38
RACK1-202ENST00000502548 RGPD2P0DJD1 1756 aa17.43■□□□□ 0.38
RACK1-202ENST00000502548 U2SURPO15042 1029 aaKnown RBP17.43■□□□□ 0.38
RACK1-202ENST00000502548 PIGBQ92521 554 aa17.43■□□□□ 0.38
RACK1-202ENST00000502548 DCAF5Q96JK2 942 aa17.43■□□□□ 0.38
RACK1-202ENST00000502548 ANO8Q9HCE9 1232 aaPredicted RBP17.43■□□□□ 0.38
RACK1-202ENST00000502548 NUDCQ9Y266 331 aa17.43■□□□□ 0.38
RACK1-202ENST00000502548 ERVV-2B6SEH9 535 aa17.42■□□□□ 0.38
RACK1-202ENST00000502548 SLC15A2Q16348 729 aa17.42■□□□□ 0.38
RACK1-202ENST00000502548 C1orf141Q5JVX7 400 aa17.42■□□□□ 0.38
RACK1-202ENST00000502548 SMARCC1Q92922 1105 aaPredicted RBP17.42■□□□□ 0.38
RACK1-202ENST00000502548 HMGB2P26583 209 aaKnown RBP17.41■□□□□ 0.38
RACK1-202ENST00000502548 TMOD3Q9NYL9 352 aa17.41■□□□□ 0.38
RACK1-202ENST00000502548 RALBP1Q15311 655 aa17.4■□□□□ 0.38
RACK1-202ENST00000502548 CCNL1Q9UK58 526 aaPredicted RBP17.4■□□□□ 0.38
RACK1-202ENST00000502548 AKAP4Q5JQC9 854 aa17.39■□□□□ 0.37
RACK1-202ENST00000502548 SBF2Q86WG5 1849 aa17.39■□□□□ 0.37
RACK1-202ENST00000502548 KCNQ4P56696 695 aa17.38■□□□□ 0.37
RACK1-202ENST00000502548 CABP4P57796 275 aa17.38■□□□□ 0.37
RACK1-202ENST00000502548 NHSQ6T4R5 1651 aa17.38■□□□□ 0.37
RACK1-202ENST00000502548 MTHFSDQ2M296 383 aaKnown RBP17.37■□□□□ 0.37
RACK1-202ENST00000502548 AKT1S1Q96B36 256 aa17.37■□□□□ 0.37
RACK1-202ENST00000502548 U2AF1L5P0DN76 240 aaPredicted RBP17.36■□□□□ 0.37
RACK1-202ENST00000502548 U2AF1Q01081 240 aaKnown RBP eCLIP17.36■□□□□ 0.37
RACK1-202ENST00000502548 ATG3Q9NT62 314 aa17.36■□□□□ 0.37
RACK1-202ENST00000502548 ASAP1Q9ULH1 1129 aa17.36■□□□□ 0.37
RACK1-202ENST00000502548 PALLDQ8WX93 1383 aa17.36■□□□□ 0.37
RACK1-202ENST00000502548 COL3A1P02461 1466 aaPredicted RBP17.36■□□□□ 0.37
RACK1-202ENST00000502548 FCHSD2O94868 740 aa17.35■□□□□ 0.37
RACK1-202ENST00000502548 ZNF827Q17R98 1081 aa17.34■□□□□ 0.37
RACK1-202ENST00000502548 NFATC2IPQ8NCF5 419 aa17.34■□□□□ 0.37
RACK1-202ENST00000502548 PDGFDQ9GZP0 370 aaPredicted RBP17.34■□□□□ 0.37
RACK1-202ENST00000502548 SPON1Q9HCB6 807 aa17.34■□□□□ 0.37
RACK1-202ENST00000502548 TFCP2L1Q9NZI6 479 aa17.34■□□□□ 0.37
RACK1-202ENST00000502548 SHANK3Q9BYB0 1731 aa17.33■□□□□ 0.37
RACK1-202ENST00000502548 LOC102724428A0A0B4J2F2 783 aa17.33■□□□□ 0.36
RACK1-202ENST00000502548 SIK1P57059 783 aa17.33■□□□□ 0.36
RACK1-202ENST00000502548 GAS2L2Q8NHY3 880 aa17.33■□□□□ 0.36
RACK1-202ENST00000502548 RSPH6AQ9H0K4 717 aa17.33■□□□□ 0.36
RACK1-202ENST00000502548 LGR6Q9HBX8 967 aa17.33■□□□□ 0.36
RACK1-202ENST00000502548 RGPD3A6NKT7 1758 aaPredicted RBP17.33■□□□□ 0.36
RACK1-202ENST00000502548 RGPD4Q7Z3J3 1758 aa17.33■□□□□ 0.36
RACK1-202ENST00000502548 PKD1L3Q7Z443 1732 aa17.33■□□□□ 0.36
RACK1-202ENST00000502548 RREB1Q92766 1687 aa17.32■□□□□ 0.36
RACK1-202ENST00000502548 RNMTO43148 476 aaKnown RBP17.32■□□□□ 0.36
RACK1-202ENST00000502548 PRKAR2BP31323 418 aa17.32■□□□□ 0.36
RACK1-202ENST00000502548 PHACTR3Q96KR7 559 aa17.32■□□□□ 0.36
RACK1-202ENST00000502548 ZNF316A6NFI3 1004 aaPredicted RBP17.31■□□□□ 0.36
RACK1-202ENST00000502548 KDM6AO15550 1401 aaPredicted RBP17.3■□□□□ 0.36
RACK1-202ENST00000502548 ZBTB7AO95365 584 aa17.3■□□□□ 0.36
RACK1-202ENST00000502548 ATP6V1AP38606 617 aa17.3■□□□□ 0.36
RACK1-202ENST00000502548 SLC52A2Q9HAB3 445 aa17.3■□□□□ 0.36
RACK1-202ENST00000502548 NUP188Q5SRE5 1749 aa17.3■□□□□ 0.36
RACK1-202ENST00000502548 BTAF1O14981 1849 aa17.29■□□□□ 0.36
RACK1-202ENST00000502548 GNAT3A8MTJ3 354 aa17.29■□□□□ 0.36
RACK1-202ENST00000502548 SLC16A10Q8TF71 515 aa17.29■□□□□ 0.36
RACK1-202ENST00000502548 MTFR1LQ9H019 292 aa17.29■□□□□ 0.36
RACK1-202ENST00000502548 KAT6BQ8WYB5 2073 aa17.28■□□□□ 0.36
RACK1-202ENST00000502548 RBM42Q9BTD8 480 aaKnown RBP17.28■□□□□ 0.36
RACK1-202ENST00000502548 ATF5Q9Y2D1 282 aaPredicted RBP17.28■□□□□ 0.36
RACK1-202ENST00000502548 PNPLA7Q6ZV29 1317 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms