RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 DEFB132Q7Z7B7 95 aa15.24■□□□□ 0.03
CTTN-208ENST00000498223 THRAP3Q9Y2W1 955 aaKnown RBP15.24■□□□□ 0.03
CTTN-208ENST00000498223 NEFMP07197 916 aa15.23■□□□□ 0.03
CTTN-208ENST00000498223 IL2RBP14784 551 aa15.23■□□□□ 0.03
CTTN-208ENST00000498223 AEBP1Q8IUX7 1158 aa15.22■□□□□ 0.03
CTTN-208ENST00000498223 FAM9BQ8IZU0 186 aa15.22■□□□□ 0.03
CTTN-208ENST00000498223 PNNQ9H307 717 aaKnown RBP15.22■□□□□ 0.03
CTTN-208ENST00000498223 BARGINQ6ZT62 677 aa15.21■□□□□ 0.03
CTTN-208ENST00000498223 CDCA7Q9BWT1 371 aaPredicted RBP15.21■□□□□ 0.03
CTTN-208ENST00000498223 VIRMAQ69YN4 1812 aaKnown RBP15.21■□□□□ 0.03
CTTN-208ENST00000498223 THSD7AQ9UPZ6 1657 aa15.21■□□□□ 0.03
CTTN-208ENST00000498223 BAG6P46379 1132 aa15.2■□□□□ 0.02
CTTN-208ENST00000498223 FCHSD2O94868 740 aa15.19■□□□□ 0.02
CTTN-208ENST00000498223 PRKAR2BP31323 418 aa15.19■□□□□ 0.02
CTTN-208ENST00000498223 ADAMTS8Q9UP79 889 aa15.19■□□□□ 0.02
CTTN-208ENST00000498223 DLG5Q8TDM6 1919 aa15.19■□□□□ 0.02
CTTN-208ENST00000498223 MAPK8IP3Q9UPT6 1336 aa15.18■□□□□ 0.02
CTTN-208ENST00000498223 MEGF6O75095 1541 aa15.18■□□□□ 0.02
CTTN-208ENST00000498223 EXOC5O00471 708 aa15.18■□□□□ 0.02
CTTN-208ENST00000498223 PLEKHO1Q53GL0 409 aaPredicted RBP15.18■□□□□ 0.02
CTTN-208ENST00000498223 PNISRQ8TF01 805 aaKnown RBP15.18■□□□□ 0.02
CTTN-208ENST00000498223 RSPH6AQ9H0K4 717 aa15.18■□□□□ 0.02
CTTN-208ENST00000498223 NCAPD2Q15021 1401 aa15.17■□□□□ 0.02
CTTN-208ENST00000498223 LRRC37A3O60309 1634 aa15.17■□□□□ 0.02
CTTN-208ENST00000498223 PKD1L3Q7Z443 1732 aa15.17■□□□□ 0.02
CTTN-208ENST00000498223 KDRP35968 1356 aa15.17■□□□□ 0.02
CTTN-208ENST00000498223 DDB1Q16531 1140 aa15.17■□□□□ 0.02
CTTN-208ENST00000498223 FAM182BQ5T319 152 aa15.17■□□□□ 0.02
CTTN-208ENST00000498223 CCDC146Q8IYE0 955 aa15.17■□□□□ 0.02
CTTN-208ENST00000498223 ZCRB1Q8TBF4 217 aaKnown RBP15.17■□□□□ 0.02
CTTN-208ENST00000498223 SPG7Q9UQ90 795 aa15.17■□□□□ 0.02
CTTN-208ENST00000498223 PDE3BQ13370 1112 aa15.16■□□□□ 0.02
CTTN-208ENST00000498223 FAM196AQ6ZSG2 479 aa15.16■□□□□ 0.02
CTTN-208ENST00000498223 DDX54Q8TDD1 881 aaKnown RBP15.16■□□□□ 0.02
CTTN-208ENST00000498223 SHANK3Q9BYB0 1731 aa15.16■□□□□ 0.02
CTTN-208ENST00000498223 OVOS2A0A0G2JMS6 1433 aa15.16■□□□□ 0.02
CTTN-208ENST00000498223 DISP2A7MBM2 1401 aa15.16■□□□□ 0.02
CTTN-208ENST00000498223 AMOTQ4VCS5 1084 aa15.14■□□□□ 0.01
CTTN-208ENST00000498223 ZNF530Q6P9A1 599 aaPredicted RBP15.14■□□□□ 0.01
CTTN-208ENST00000498223 RUNDC1Q96C34 613 aa15.14■□□□□ 0.01
CTTN-208ENST00000498223 EN1Q05925 392 aaPredicted RBP15.13■□□□□ 0.01
CTTN-208ENST00000498223 C1orf141Q5JVX7 400 aa15.13■□□□□ 0.01
CTTN-208ENST00000498223 TNS2Q63HR2 1409 aa15.13■□□□□ 0.01
CTTN-208ENST00000498223 PCDH11XQ9BZA7 1347 aa15.13■□□□□ 0.01
CTTN-208ENST00000498223 PCDH11YQ9BZA8 1340 aa15.13■□□□□ 0.01
CTTN-208ENST00000498223 GAS2L2Q8NHY3 880 aa15.12■□□□□ 0.01
CTTN-208ENST00000498223 PHACTR3Q96KR7 559 aa15.12■□□□□ 0.01
CTTN-208ENST00000498223 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.12■□□□□ 0.011e-10■■□□□ 14
CTTN-208ENST00000498223 MTHFSDQ2M296 383 aaKnown RBP15.11■□□□□ 0.01
CTTN-208ENST00000498223 PLEKHF1Q96S99 279 aa15.11■□□□□ 0.01
CTTN-208ENST00000498223 SENP3-EIF4A1A0A087X0R7 540 aa15.1■□□□□ 0.01
CTTN-208ENST00000498223 TRIM37O94972 964 aa15.1■□□□□ 0.01
CTTN-208ENST00000498223 NEUROD2Q15784 382 aa15.1■□□□□ 0.01
CTTN-208ENST00000498223 IFNL2Q8IZJ0 200 aa15.1■□□□□ 0.01
CTTN-208ENST00000498223 SCN11AQ9UI33 1791 aa15.1■□□□□ 0.01
CTTN-208ENST00000498223 SBF2Q86WG5 1849 aa15.1■□□□□ 0.01
CTTN-208ENST00000498223 ITGB4P16144 1822 aa15.09■□□□□ 0.01
CTTN-208ENST00000498223 APAF1O14727 1248 aa15.09■□□□□ 0.01
CTTN-208ENST00000498223 RRP7AQ9Y3A4 280 aaKnown RBP15.09■□□□□ 0.01
CTTN-208ENST00000498223 PLEKHG2Q9H7P9 1386 aa15.09■□□□□ 0.01
CTTN-208ENST00000498223 NFE2L2Q16236 605 aa15.08■□□□□ 0
CTTN-208ENST00000498223 AKAP4Q5JQC9 854 aa15.08■□□□□ 0
CTTN-208ENST00000498223 RTF1Q92541 710 aaKnown RBP15.08■□□□□ 0
CTTN-208ENST00000498223 CAMKK2Q96RR4 588 aa15.08■□□□□ 0
CTTN-208ENST00000498223 DOT1LQ8TEK3 1739 aa15.08■□□□□ 0
CTTN-208ENST00000498223 TNS1Q9HBL0 1735 aaKnown RBP15.07■□□□□ 0
CTTN-208ENST00000498223 PSDA5PKW4 1024 aaPredicted RBP15.07■□□□□ 0
CTTN-208ENST00000498223 GNAT3A8MTJ3 354 aa15.07■□□□□ 0
CTTN-208ENST00000498223 CYP27B1O15528 508 aa15.07■□□□□ 0
CTTN-208ENST00000498223 APBA3O96018 575 aa15.07■□□□□ 0
CTTN-208ENST00000498223 HSP90AB1P08238 724 aaKnown RBP15.07■□□□□ 0
CTTN-208ENST00000498223 PHKG2P15735 406 aa15.07■□□□□ 0
CTTN-208ENST00000498223 RIPK4P57078 832 aa15.07■□□□□ 0
CTTN-208ENST00000498223 EZH2Q15910 746 aaKnown RBP15.07■□□□□ 0
CTTN-208ENST00000498223 MARCH10Q8NA82 808 aaPredicted RBP15.07■□□□□ 0
CTTN-208ENST00000498223 SALL2Q9Y467 1007 aaPredicted RBP15.07■□□□□ 0
CTTN-208ENST00000498223 MAP3K5Q99683 1374 aa15.07■□□□□ 0
CTTN-208ENST00000498223 TMPOP42166 694 aaKnown RBP15.06■□□□□ 0
CTTN-208ENST00000498223 MPRIPQ6WCQ1 1025 aa15.05■□□□□ -0
CTTN-208ENST00000498223 LMOD3Q0VAK6 560 aa15.04■□□□□ -0
CTTN-208ENST00000498223 R3HDM1Q15032 1099 aaKnown RBP15.04■□□□□ -0
CTTN-208ENST00000498223 SYTL4Q96C24 671 aaPredicted RBP15.04■□□□□ -0
CTTN-208ENST00000498223 ACSBG1Q96GR2 724 aa15.04■□□□□ -0
CTTN-208ENST00000498223 LRP5O75197 1615 aa15.03■□□□□ -0
CTTN-208ENST00000498223 DCAF5Q96JK2 942 aa15.03■□□□□ -0
CTTN-208ENST00000498223 TOGARAM1Q9Y4F4 1720 aa15.03■□□□□ -0
CTTN-208ENST00000498223 RNMTO43148 476 aaKnown RBP15.02■□□□□ -0
CTTN-208ENST00000498223 HTATSF1O43719 755 aaKnown RBP15.01□□□□□ -0.01
CTTN-208ENST00000498223 CABP4P57796 275 aa15.01□□□□□ -0.01
CTTN-208ENST00000498223 DCTN1Q14203 1278 aa15.01□□□□□ -0.01
CTTN-208ENST00000498223 NKX1-1Q15270 411 aaPredicted RBP15.01□□□□□ -0.01
CTTN-208ENST00000498223 MCM10Q7L590 875 aa15.01□□□□□ -0.01
CTTN-208ENST00000498223 LGR6Q9HBX8 967 aa15.01□□□□□ -0.01
CTTN-208ENST00000498223 BTAF1O14981 1849 aa15.01□□□□□ -0.01
CTTN-208ENST00000498223 NHSQ6T4R5 1651 aa15□□□□□ -0.01
CTTN-208ENST00000498223 PRIM1P49642 420 aaKnown RBP15□□□□□ -0.01
CTTN-208ENST00000498223 HNRNPUQ00839 825 aaKnown RBP eCLIP15□□□□□ -0.016e-9■□□□□ 10.5
CTTN-208ENST00000498223 TEFQ10587 303 aa15□□□□□ -0.01
CTTN-208ENST00000498223 BCL9O00512 1426 aa15□□□□□ -0.01
CTTN-208ENST00000498223 KDM6AO15550 1401 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms