RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 TRIM50Q86XT4 487 aa9.53□□□□□ -0.88
SSR3-209ENST00000498205 PPP1R12CQ9BZL4 782 aa9.53□□□□□ -0.88
SSR3-209ENST00000498205 SERPINA10Q9UK55 444 aa9.53□□□□□ -0.88
SSR3-209ENST00000498205 PIK3CDO00329 1044 aa9.52□□□□□ -0.89
SSR3-209ENST00000498205 SPINT1O43278 529 aa9.52□□□□□ -0.89
SSR3-209ENST00000498205 BMP1P13497 986 aa9.52□□□□□ -0.89
SSR3-209ENST00000498205 ADD1P35611 737 aaKnown RBP9.52□□□□□ -0.89
SSR3-209ENST00000498205 SCTRP47872 440 aa9.52□□□□□ -0.89
SSR3-209ENST00000498205 ATP1A2P50993 1020 aa9.52□□□□□ -0.89
SSR3-209ENST00000498205 ESCO1Q5FWF5 840 aa9.52□□□□□ -0.89
SSR3-209ENST00000498205 TRIM47Q96LD4 638 aa9.52□□□□□ -0.89
SSR3-209ENST00000498205 CDCA7Q9BWT1 371 aaPredicted RBP9.52□□□□□ -0.89
SSR3-209ENST00000498205 OSBPL3Q9H4L5 887 aa9.52□□□□□ -0.89
SSR3-209ENST00000498205 PALM3A6NDB9 673 aaPredicted RBP9.51□□□□□ -0.89
SSR3-209ENST00000498205 NCOA4Q13772 614 aa9.51□□□□□ -0.89
SSR3-209ENST00000498205 TBC1D9Q6ZT07 1266 aa9.51□□□□□ -0.89
SSR3-209ENST00000498205 CCDC97Q96F63 343 aaPredicted RBP9.51□□□□□ -0.89
SSR3-209ENST00000498205 ZFP42Q96MM3 310 aa9.51□□□□□ -0.89
SSR3-209ENST00000498205 PURBQ96QR8 312 aaKnown RBP9.51□□□□□ -0.89
SSR3-209ENST00000498205 USP17L3A6NCW0 530 aa9.5□□□□□ -0.89
SSR3-209ENST00000498205 USP17L4A6NCW7 530 aa9.5□□□□□ -0.89
SSR3-209ENST00000498205 GPC1P35052 558 aa9.5□□□□□ -0.89
SSR3-209ENST00000498205 RELBQ01201 579 aa9.5□□□□□ -0.89
SSR3-209ENST00000498205 TSGA10IPQ3SY00 556 aa9.5□□□□□ -0.89
SSR3-209ENST00000498205 USP17L2Q6R6M4 530 aa9.5□□□□□ -0.89
SSR3-209ENST00000498205 USP17L1Q7RTZ2 530 aa9.5□□□□□ -0.89
SSR3-209ENST00000498205 TFIP11Q9UBB9 837 aaKnown RBP9.5□□□□□ -0.89
SSR3-209ENST00000498205 DACH1Q9UI36 760 aa9.5□□□□□ -0.89
SSR3-209ENST00000498205 MAFBQ9Y5Q3 323 aaPredicted RBP9.5□□□□□ -0.89
SSR3-209ENST00000498205 C11orf95C9JLR9 678 aaPredicted RBP9.49□□□□□ -0.89
SSR3-209ENST00000498205 C6orf118Q5T5N4 469 aa9.49□□□□□ -0.89
SSR3-209ENST00000498205 GMPR2Q9P2T1 348 aaKnown RBP9.49□□□□□ -0.89
SSR3-209ENST00000498205 WASLO00401 505 aaPredicted RBP9.48□□□□□ -0.89
SSR3-209ENST00000498205 CLN3Q13286 438 aa9.48□□□□□ -0.89
SSR3-209ENST00000498205 ZNF787Q6DD87 383 aa9.48□□□□□ -0.89
SSR3-209ENST00000498205 NLRP3Q96P20 1036 aa9.48□□□□□ -0.89
SSR3-209ENST00000498205 TIMELESSQ9UNS1 1208 aa9.48□□□□□ -0.89
SSR3-209ENST00000498205 AGBL1Q96MI9 1066 aa9.47□□□□□ -0.89
SSR3-209ENST00000498205 SOS2Q07890 1332 aaPredicted RBP9.47□□□□□ -0.89
SSR3-209ENST00000498205 A0A1W2PRU2 124 aa9.46□□□□□ -0.9
SSR3-209ENST00000498205 TTLL8A6PVC2 850 aa9.46□□□□□ -0.9
SSR3-209ENST00000498205 GTF2IP78347 998 aa9.46□□□□□ -0.9
SSR3-209ENST00000498205 KDF1Q8NAX2 398 aaPredicted RBP9.46□□□□□ -0.9
SSR3-209ENST00000498205 POLMQ9NP87 494 aaPredicted RBP9.46□□□□□ -0.9
SSR3-209ENST00000498205 LMOD1P29536 600 aaPredicted RBP9.45□□□□□ -0.9
SSR3-209ENST00000498205 RNF144AP50876 292 aaPredicted RBP9.45□□□□□ -0.9
SSR3-209ENST00000498205 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.45□□□□□ -0.9
SSR3-209ENST00000498205 LARGE2Q8N3Y3 721 aa9.45□□□□□ -0.9
SSR3-209ENST00000498205 ESYT1Q9BSJ8 1104 aa9.45□□□□□ -0.9
SSR3-209ENST00000498205 ZNF395Q9H8N7 513 aaPredicted RBP9.45□□□□□ -0.9
SSR3-209ENST00000498205 ARHGEF10LQ9HCE6 1279 aa9.45□□□□□ -0.9
SSR3-209ENST00000498205 MKRN1Q9UHC7 482 aaKnown RBP9.45□□□□□ -0.9
SSR3-209ENST00000498205 RBM19Q9Y4C8 960 aaKnown RBP9.45□□□□□ -0.9
SSR3-209ENST00000498205 BACH1O14867 736 aa9.44□□□□□ -0.9
SSR3-209ENST00000498205 MAN1A2O60476 641 aa9.44□□□□□ -0.9
SSR3-209ENST00000498205 GTF2E1P29083 439 aaPredicted RBP9.44□□□□□ -0.9
SSR3-209ENST00000498205 DEPDC4Q8N2C3 294 aa9.44□□□□□ -0.9
SSR3-209ENST00000498205 VRTNQ9H8Y1 702 aa9.44□□□□□ -0.9
SSR3-209ENST00000498205 PCDHGA11Q9Y5H2 935 aa9.44□□□□□ -0.9
SSR3-209ENST00000498205 MEN1O00255 615 aa9.43□□□□□ -0.9
SSR3-209ENST00000498205 CNKSR1Q969H4 720 aa9.43□□□□□ -0.9
SSR3-209ENST00000498205 XAGE2Q96GT9 111 aa9.43□□□□□ -0.9
SSR3-209ENST00000498205 INSM2Q96T92 566 aaPredicted RBP9.43□□□□□ -0.9
SSR3-209ENST00000498205 INHAP05111 366 aa9.42□□□□□ -0.9
SSR3-209ENST00000498205 GDF10P55107 478 aa9.42□□□□□ -0.9
SSR3-209ENST00000498205 PSME1Q06323 249 aa9.42□□□□□ -0.9
SSR3-209ENST00000498205 CFAP70Q5T0N1 1121 aa9.42□□□□□ -0.9
SSR3-209ENST00000498205 LARP1Q6PKG0 1096 aaKnown RBP9.42□□□□□ -0.9
SSR3-209ENST00000498205 DNAAF2Q9NVR5 837 aaKnown RBP9.42□□□□□ -0.9
SSR3-209ENST00000498205 ARID3CA6NKF2 412 aa9.41□□□□□ -0.9
SSR3-209ENST00000498205 FAM196BA6NMK8 535 aa9.41□□□□□ -0.9
SSR3-209ENST00000498205 CTSOP43234 321 aaPredicted RBP9.41□□□□□ -0.9
SSR3-209ENST00000498205 SLC27A3Q5K4L6 730 aa9.41□□□□□ -0.9
SSR3-209ENST00000498205 SIX5Q8N196 739 aa9.41□□□□□ -0.9
SSR3-209ENST00000498205 OGFOD1Q8N543 542 aa9.41□□□□□ -0.9
SSR3-209ENST00000498205 RNF217Q8TC41 542 aa9.41□□□□□ -0.9
SSR3-209ENST00000498205 M0R2N6 131 aa9.4□□□□□ -0.9
SSR3-209ENST00000498205 RASA1P20936 1047 aa9.4□□□□□ -0.9
SSR3-209ENST00000498205 WDR44Q5JSH3 913 aa9.4□□□□□ -0.9
SSR3-209ENST00000498205 LYSMD3Q7Z3D4 306 aa9.4□□□□□ -0.9
SSR3-209ENST00000498205 ETNK1Q9HBU6 452 aa9.4□□□□□ -0.9
SSR3-209ENST00000498205 IL2RAP01589 272 aa9.39□□□□□ -0.91
SSR3-209ENST00000498205 SNRPBP14678 240 aaKnown RBP9.39□□□□□ -0.91
SSR3-209ENST00000498205 SCNN1DP51172 638 aa9.39□□□□□ -0.91
SSR3-209ENST00000498205 KANK4Q5T7N3 995 aaPredicted RBP9.39□□□□□ -0.91
SSR3-209ENST00000498205 FOXD4L5Q5VV16 416 aaPredicted RBP9.39□□□□□ -0.91
SSR3-209ENST00000498205 NPAS3Q8IXF0 933 aa9.39□□□□□ -0.91
SSR3-209ENST00000498205 RAB6BQ9NRW1 208 aa9.39□□□□□ -0.91
SSR3-209ENST00000498205 HRH3Q9Y5N1 445 aa9.39□□□□□ -0.91
SSR3-209ENST00000498205 CLDN10P78369 228 aa9.38□□□□□ -0.91
SSR3-209ENST00000498205 CENPCQ03188 943 aa9.38□□□□□ -0.91
SSR3-209ENST00000498205 CCDC102BQ68D86 513 aa9.38□□□□□ -0.91
SSR3-209ENST00000498205 CCDC82Q8N4S0 544 aa9.38□□□□□ -0.91
SSR3-209ENST00000498205 NBPF15Q8N660 670 aa9.38□□□□□ -0.91
SSR3-209ENST00000498205 SLC4A9Q96Q91 983 aa9.38□□□□□ -0.91
SSR3-209ENST00000498205 ZSCAN10Q96SZ4 725 aaPredicted RBP9.38□□□□□ -0.91
SSR3-209ENST00000498205 GRIP2Q9C0E4 1043 aa9.38□□□□□ -0.91
SSR3-209ENST00000498205 DNMT3LQ9UJW3 386 aa9.38□□□□□ -0.91
SSR3-209ENST00000498205 POTECB2RU33 542 aa9.37□□□□□ -0.91
SSR3-209ENST00000498205 TMEM229AB2RXF0 380 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms