RNA–Protein interactions for RNA: ENST00000498135.5

TMEM50A-206, Transcript of transmembrane protein 50A, humanhuman

TSL 3

Gene TMEM50A, Length 776 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-206ENST00000498135 IGSF1Q8N6C5 1336 aa28.35■■■□□ 2.13
TMEM50A-206ENST00000498135 ANKRD36BQ8N2N9 1353 aa28.35■■■□□ 2.13
TMEM50A-206ENST00000498135 ANKRD24Q8TF21 1146 aa28.34■■■□□ 2.13
TMEM50A-206ENST00000498135 DOT1LQ8TEK3 1739 aa28.33■■■□□ 2.13
TMEM50A-206ENST00000498135 WDR90Q96KV7 1748 aa28.33■■■□□ 2.13
TMEM50A-206ENST00000498135 NSD2O96028 1365 aa28.31■■■□□ 2.12
TMEM50A-206ENST00000498135 EVC2Q86UK5 1308 aa28.3■■■□□ 2.12
TMEM50A-206ENST00000498135 KLRG1Q96E93 195 aa28.3■■■□□ 2.12
TMEM50A-206ENST00000498135 RAB3GAP2Q9H2M9 1393 aa28.29■■■□□ 2.12
TMEM50A-206ENST00000498135 LTN1O94822 1766 aa28.29■■■□□ 2.12
TMEM50A-206ENST00000498135 JMYQ8N9B5 988 aa28.28■■■□□ 2.12
TMEM50A-206ENST00000498135 FLAD1Q8NFF5 587 aa28.28■■■□□ 2.12
TMEM50A-206ENST00000498135 KTN1Q86UP2 1357 aaKnown RBP28.26■■■□□ 2.12
TMEM50A-206ENST00000498135 USP47Q96K76 1375 aa28.26■■■□□ 2.12
TMEM50A-206ENST00000498135 CICQ96RK0 1608 aaPredicted RBP28.25■■■□□ 2.11
TMEM50A-206ENST00000498135 USP31Q70CQ4 1352 aa28.23■■■□□ 2.11
TMEM50A-206ENST00000498135 C5P01031 1676 aa28.23■■■□□ 2.11
TMEM50A-206ENST00000498135 HTRA3P83110 453 aa28.22■■■□□ 2.11
TMEM50A-206ENST00000498135 USP54Q70EL1 1684 aa28.2■■■□□ 2.11
TMEM50A-206ENST00000498135 HMGB2P26583 209 aaKnown RBP28.2■■■□□ 2.1
TMEM50A-206ENST00000498135 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.2■■■□□ 2.1
TMEM50A-206ENST00000498135 RBM46Q8TBY0 533 aaKnown RBP28.2■■■□□ 2.1
TMEM50A-206ENST00000498135 NMRK2Q9NPI5 230 aa28.2■■■□□ 2.1
TMEM50A-206ENST00000498135 FAM208AQ9UK61 1670 aaKnown RBP28.18■■■□□ 2.1
TMEM50A-206ENST00000498135 MON2Q7Z3U7 1717 aa28.18■■■□□ 2.1
TMEM50A-206ENST00000498135 C16orf71Q8IYS4 520 aaPredicted RBP28.17■■■□□ 2.1
TMEM50A-206ENST00000498135 NME9Q86XW9 330 aa28.15■■■□□ 2.1
TMEM50A-206ENST00000498135 ZCRB1Q8TBF4 217 aaKnown RBP28.15■■■□□ 2.1
TMEM50A-206ENST00000498135 LTV1Q96GA3 475 aaPredicted RBP28.15■■■□□ 2.1
TMEM50A-206ENST00000498135 FSTL1Q12841 308 aa28.12■■■□□ 2.09
TMEM50A-206ENST00000498135 AK7Q96M32 723 aa28.12■■■□□ 2.09
TMEM50A-206ENST00000498135 TAF1LQ8IZX4 1826 aa28.11■■■□□ 2.09
TMEM50A-206ENST00000498135 IP6K1Q92551 441 aa28.1■■■□□ 2.09
TMEM50A-206ENST00000498135 PHF14O94880 888 aa28.09■■■□□ 2.09
TMEM50A-206ENST00000498135 SLC34A2O95436 690 aa28.08■■■□□ 2.09
TMEM50A-206ENST00000498135 C4BP0C0L5 1744 aa28.08■■■□□ 2.09
TMEM50A-206ENST00000498135 PALLDQ8WX93 1383 aa28.08■■■□□ 2.09
TMEM50A-206ENST00000498135 NSD3Q9BZ95 1437 aa28.07■■■□□ 2.08
TMEM50A-206ENST00000498135 PCNTO95613 3336 aa28.07■■■□□ 2.08
TMEM50A-206ENST00000498135 BCS1LQ9Y276 419 aa28.06■■■□□ 2.08
TMEM50A-206ENST00000498135 MEGF6O75095 1541 aa28.06■■■□□ 2.08
TMEM50A-206ENST00000498135 TOGARAM1Q9Y4F4 1720 aa28.06■■■□□ 2.08
TMEM50A-206ENST00000498135 ARHGAP27Q6ZUM4 889 aa28.05■■■□□ 2.08
TMEM50A-206ENST00000498135 AMIGO3Q86WK7 504 aa28.05■■■□□ 2.08
TMEM50A-206ENST00000498135 SBNO2Q9Y2G9 1366 aa28.05■■■□□ 2.08
TMEM50A-206ENST00000498135 PXDNLA1KZ92 1463 aa28.04■■■□□ 2.08
TMEM50A-206ENST00000498135 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.04■■■□□ 2.08
TMEM50A-206ENST00000498135 UBR3Q6ZT12 1888 aa28.03■■■□□ 2.08
TMEM50A-206ENST00000498135 HSPA1AP0DMV8 641 aaKnown RBP28.02■■■□□ 2.08
TMEM50A-206ENST00000498135 HSPA1BP0DMV9 641 aaKnown RBP28.02■■■□□ 2.08
TMEM50A-206ENST00000498135 PLEKHG2Q9H7P9 1386 aa28.01■■■□□ 2.07
TMEM50A-206ENST00000498135 SMIM5Q71RC9 77 aa28.01■■■□□ 2.07
TMEM50A-206ENST00000498135 SSFA2P28290 1259 aa27.99■■■□□ 2.07
TMEM50A-206ENST00000498135 N4BP2Q86UW6 1770 aaPredicted RBP27.98■■■□□ 2.07
TMEM50A-206ENST00000498135 KIAA1551Q9HCM1 1747 aa27.98■■■□□ 2.07
TMEM50A-206ENST00000498135 KDM2BQ8NHM5 1336 aa27.97■■■□□ 2.07
TMEM50A-206ENST00000498135 CD163L1Q9NR16 1453 aa27.97■■■□□ 2.07
TMEM50A-206ENST00000498135 RGPD2P0DJD1 1756 aa27.97■■■□□ 2.07
TMEM50A-206ENST00000498135 TGFB2P61812 414 aa27.97■■■□□ 2.07
TMEM50A-206ENST00000498135 C9orf131Q5VYM1 1079 aa27.97■■■□□ 2.07
TMEM50A-206ENST00000498135 MPRIPQ6WCQ1 1025 aa27.97■■■□□ 2.07
TMEM50A-206ENST00000498135 HDGFL2Q7Z4V5 671 aaPredicted RBP27.97■■■□□ 2.07
TMEM50A-206ENST00000498135 KIF13BQ9NQT8 1826 aa27.97■■■□□ 2.07
TMEM50A-206ENST00000498135 EDC4Q6P2E9 1401 aaKnown RBP27.96■■■□□ 2.07
TMEM50A-206ENST00000498135 SMARCC1Q92922 1105 aaPredicted RBP27.96■■■□□ 2.07
TMEM50A-206ENST00000498135 KCPQ6ZWJ8 1503 aa27.96■■■□□ 2.07
TMEM50A-206ENST00000498135 CGNL1Q0VF96 1302 aa27.95■■■□□ 2.07
TMEM50A-206ENST00000498135 A0A0G2JLW4 131 aa27.95■■■□□ 2.06
TMEM50A-206ENST00000498135 C10orf71Q711Q0 1435 aa27.94■■■□□ 2.06
TMEM50A-206ENST00000498135 FCHSD2O94868 740 aa27.94■■■□□ 2.06
TMEM50A-206ENST00000498135 MMP10P09238 476 aa27.94■■■□□ 2.06
TMEM50A-206ENST00000498135 HOXC9P31274 260 aa27.94■■■□□ 2.06
TMEM50A-206ENST00000498135 SMC1BQ8NDV3 1235 aa27.94■■■□□ 2.06
TMEM50A-206ENST00000498135 TMC1Q8TDI8 760 aa27.93■■■□□ 2.06
TMEM50A-206ENST00000498135 AMPHP49418 695 aa27.92■■■□□ 2.06
TMEM50A-206ENST00000498135 RAPGEF4Q8WZA2 1011 aa27.92■■■□□ 2.06
TMEM50A-206ENST00000498135 PKD1L3Q7Z443 1732 aa27.92■■■□□ 2.06
TMEM50A-206ENST00000498135 RRAGCQ9HB90 399 aa27.91■■■□□ 2.06
TMEM50A-206ENST00000498135 MAP3K19Q56UN5 1328 aa27.91■■■□□ 2.06
TMEM50A-206ENST00000498135 PCDH11XQ9BZA7 1347 aa27.91■■■□□ 2.06
TMEM50A-206ENST00000498135 PCDH11YQ9BZA8 1340 aa27.91■■■□□ 2.06
TMEM50A-206ENST00000498135 TNRC6CQ9HCJ0 1690 aaKnown RBP27.89■■■□□ 2.06
TMEM50A-206ENST00000498135 USHBP1Q8N6Y0 703 aa27.88■■■□□ 2.05
TMEM50A-206ENST00000498135 GNPATO15228 680 aa27.87■■■□□ 2.05
TMEM50A-206ENST00000498135 DPEP1P16444 411 aa27.87■■■□□ 2.05
TMEM50A-206ENST00000498135 TATP17735 454 aaPredicted RBP27.87■■■□□ 2.05
TMEM50A-206ENST00000498135 LINC00116Q8NCU8 138 aa27.87■■■□□ 2.05
TMEM50A-206ENST00000498135 ROCK2O75116 1388 aaKnown RBP27.86■■■□□ 2.05
TMEM50A-206ENST00000498135 NBPF6Q5VWK0 638 aa27.86■■■□□ 2.05
TMEM50A-206ENST00000498135 NBPF4Q96M43 638 aa27.86■■■□□ 2.05
TMEM50A-206ENST00000498135 TERF2IPQ9NYB0 399 aa27.85■■■□□ 2.05
TMEM50A-206ENST00000498135 RNF181Q9P0P0 153 aa27.85■■■□□ 2.05
TMEM50A-206ENST00000498135 ITGB4P16144 1822 aa27.84■■■□□ 2.05
TMEM50A-206ENST00000498135 SLC12A5Q9H2X9 1139 aa27.84■■■□□ 2.05
TMEM50A-206ENST00000498135 CCDC87Q9NVE4 849 aa27.84■■■□□ 2.05
TMEM50A-206ENST00000498135 BRCA1P38398 1863 aaKnown RBP27.84■■■□□ 2.05
TMEM50A-206ENST00000498135 A0A1W2PP64 1363 aa27.84■■■□□ 2.05
TMEM50A-206ENST00000498135 ARFGEF1Q9Y6D6 1849 aa27.83■■■□□ 2.05
TMEM50A-206ENST00000498135 LOC102724428A0A0B4J2F2 783 aa27.82■■■□□ 2.04
TMEM50A-206ENST00000498135 SIK1P57059 783 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms