RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 SLC12A5Q9H2X9 1139 aa26.56■■□□□ 1.84
ACTN4-208ENST00000497637 PAPPAQ13219 1627 aa26.56■■□□□ 1.84
ACTN4-208ENST00000497637 USP6P35125 1406 aa26.56■■□□□ 1.84
ACTN4-208ENST00000497637 ATP10DQ9P241 1426 aa26.56■■□□□ 1.84
ACTN4-208ENST00000497637 NLGN2Q8NFZ4 835 aa26.55■■□□□ 1.84
ACTN4-208ENST00000497637 AKT1S1Q96B36 256 aa26.55■■□□□ 1.84
ACTN4-208ENST00000497637 ACSBG1Q96GR2 724 aa26.55■■□□□ 1.84
ACTN4-208ENST00000497637 WNK3Q9BYP7 1800 aa26.55■■□□□ 1.84
ACTN4-208ENST00000497637 HNRNPUQ00839 825 aaKnown RBP eCLIP26.54■■□□□ 1.84
ACTN4-208ENST00000497637 LRRC4BQ9NT99 713 aa26.54■■□□□ 1.84
ACTN4-208ENST00000497637 COL18A1P39060 1754 aa26.53■■□□□ 1.84
ACTN4-208ENST00000497637 YBX3P16989 372 aaKnown RBP eCLIP26.53■■□□□ 1.84
ACTN4-208ENST00000497637 CABP2Q9NPB3 220 aa26.53■■□□□ 1.84
ACTN4-208ENST00000497637 NHSQ6T4R5 1651 aa26.52■■□□□ 1.84
ACTN4-208ENST00000497637 TFCP2L1Q9NZI6 479 aa26.51■■□□□ 1.83
ACTN4-208ENST00000497637 CABP1Q9NZU7 370 aa26.5■■□□□ 1.83
ACTN4-208ENST00000497637 ANKRD36BQ8N2N9 1353 aa26.49■■□□□ 1.83
ACTN4-208ENST00000497637 PNPLA7Q6ZV29 1317 aa26.49■■□□□ 1.83
ACTN4-208ENST00000497637 PPP2R1AP30153 589 aa26.47■■□□□ 1.83
ACTN4-208ENST00000497637 NSD3Q9BZ95 1437 aa26.47■■□□□ 1.83
ACTN4-208ENST00000497637 ABCC6O95255 1503 aa26.46■■□□□ 1.83
ACTN4-208ENST00000497637 GTF3C3Q9Y5Q9 886 aa26.45■■□□□ 1.82
ACTN4-208ENST00000497637 IL2RBP14784 551 aa26.44■■□□□ 1.82
ACTN4-208ENST00000497637 ZNF692Q9BU19 519 aaPredicted RBP26.44■■□□□ 1.82
ACTN4-208ENST00000497637 COL24A1Q17RW2 1714 aa26.43■■□□□ 1.82
ACTN4-208ENST00000497637 INSRP06213 1382 aa26.42■■□□□ 1.82
ACTN4-208ENST00000497637 SOX12O15370 315 aa26.41■■□□□ 1.82
ACTN4-208ENST00000497637 NLRP2Q9NX02 1062 aa26.41■■□□□ 1.82
ACTN4-208ENST00000497637 QSER1Q2KHR3 1735 aa26.41■■□□□ 1.82
ACTN4-208ENST00000497637 ZBED9Q6R2W3 1325 aa26.4■■□□□ 1.82
ACTN4-208ENST00000497637 APLP1P51693 650 aa26.4■■□□□ 1.82
ACTN4-208ENST00000497637 TERF2IPQ9NYB0 399 aa26.4■■□□□ 1.82
ACTN4-208ENST00000497637 ADCY9O60503 1353 aa26.4■■□□□ 1.82
ACTN4-208ENST00000497637 CGNL1Q0VF96 1302 aa26.39■■□□□ 1.82
ACTN4-208ENST00000497637 BTAF1O14981 1849 aa26.39■■□□□ 1.82
ACTN4-208ENST00000497637 CD2APQ9Y5K6 639 aa26.39■■□□□ 1.82
ACTN4-208ENST00000497637 TTC21BQ7Z4L5 1316 aa26.39■■□□□ 1.81
ACTN4-208ENST00000497637 TTC21AQ8NDW8 1320 aa26.39■■□□□ 1.81
ACTN4-208ENST00000497637 NSD2O96028 1365 aa26.38■■□□□ 1.81
ACTN4-208ENST00000497637 ZNF526Q8TF50 670 aaPredicted RBP26.38■■□□□ 1.81
ACTN4-208ENST00000497637 PIK3C2AO00443 1686 aa26.38■■□□□ 1.81
ACTN4-208ENST00000497637 KAT6BQ8WYB5 2073 aa26.36■■□□□ 1.81
ACTN4-208ENST00000497637 ERBB3P21860 1342 aa26.36■■□□□ 1.81
ACTN4-208ENST00000497637 A0A1W2PP64 1363 aa26.35■■□□□ 1.81
ACTN4-208ENST00000497637 MSH5O43196 834 aa26.34■■□□□ 1.81
ACTN4-208ENST00000497637 HDGFL2Q7Z4V5 671 aaPredicted RBP26.34■■□□□ 1.81
ACTN4-208ENST00000497637 MORC1Q86VD1 984 aa26.34■■□□□ 1.81
ACTN4-208ENST00000497637 CD163L1Q9NR16 1453 aa26.34■■□□□ 1.81
ACTN4-208ENST00000497637 HMGB2P26583 209 aaKnown RBP26.33■■□□□ 1.81
ACTN4-208ENST00000497637 RGPD5Q99666 1765 aa26.33■■□□□ 1.8
ACTN4-208ENST00000497637 NFAT5O94916 1531 aa26.3■■□□□ 1.8
ACTN4-208ENST00000497637 COL23A1Q86Y22 540 aaPredicted RBP26.29■■□□□ 1.8
ACTN4-208ENST00000497637 DNAJC5GQ8N7S2 189 aa26.29■■□□□ 1.8
ACTN4-208ENST00000497637 KIF3CO14782 793 aa26.28■■□□□ 1.8
ACTN4-208ENST00000497637 KCNQ4P56696 695 aa26.28■■□□□ 1.8
ACTN4-208ENST00000497637 DDX54Q8TDD1 881 aaKnown RBP26.28■■□□□ 1.8
ACTN4-208ENST00000497637 SYTL4Q96C24 671 aaPredicted RBP26.27■■□□□ 1.8
ACTN4-208ENST00000497637 CCNL1Q9UK58 526 aaPredicted RBP26.27■■□□□ 1.8
ACTN4-208ENST00000497637 PRIM1P49642 420 aaKnown RBP26.25■■□□□ 1.79
ACTN4-208ENST00000497637 FLAD1Q8NFF5 587 aa26.25■■□□□ 1.79
ACTN4-208ENST00000497637 ANKRD24Q8TF21 1146 aa26.25■■□□□ 1.79
ACTN4-208ENST00000497637 TOMM70O94826 608 aa26.23■■□□□ 1.79
ACTN4-208ENST00000497637 MSL1Q68DK7 614 aa26.23■■□□□ 1.79
ACTN4-208ENST00000497637 FYB1O15117 783 aa26.22■■□□□ 1.79
ACTN4-208ENST00000497637 WDR43Q15061 677 aaKnown RBP eCLIP26.22■■□□□ 1.79
ACTN4-208ENST00000497637 ADAMTS8Q9UP79 889 aa26.21■■□□□ 1.79
ACTN4-208ENST00000497637 USP31Q70CQ4 1352 aa26.2■■□□□ 1.78
ACTN4-208ENST00000497637 TUBGCP6Q96RT7 1819 aa26.19■■□□□ 1.78
ACTN4-208ENST00000497637 EDC4Q6P2E9 1401 aaKnown RBP26.16■■□□□ 1.78
ACTN4-208ENST00000497637 COL13A1Q5TAT6 717 aaPredicted RBP26.16■■□□□ 1.78
ACTN4-208ENST00000497637 GGNBP2Q9H3C7 697 aa26.16■■□□□ 1.78
ACTN4-208ENST00000497637 IGSF1Q8N6C5 1336 aa26.15■■□□□ 1.78
ACTN4-208ENST00000497637 TNNT2P45379 298 aaPredicted RBP26.14■■□□□ 1.78
ACTN4-208ENST00000497637 MTHFSP49914 203 aa26.14■■□□□ 1.78
ACTN4-208ENST00000497637 PRELPP51888 382 aa26.14■■□□□ 1.78
ACTN4-208ENST00000497637 SMG6Q86US8 1419 aaKnown RBP26.14■■□□□ 1.77
ACTN4-208ENST00000497637 CFAP53Q96M91 514 aa26.13■■□□□ 1.77
ACTN4-208ENST00000497637 LY75O60449 1722 aa26.13■■□□□ 1.77
ACTN4-208ENST00000497637 CAPN15O75808 1086 aa26.12■■□□□ 1.77
ACTN4-208ENST00000497637 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.12■■□□□ 1.77
ACTN4-208ENST00000497637 JMYQ8N9B5 988 aa26.12■■□□□ 1.77
ACTN4-208ENST00000497637 TNS4Q8IZW8 715 aa26.11■■□□□ 1.77
ACTN4-208ENST00000497637 ZCRB1Q8TBF4 217 aaKnown RBP26.1■■□□□ 1.77
ACTN4-208ENST00000497637 KLRG1Q96E93 195 aa26.1■■□□□ 1.77
ACTN4-208ENST00000497637 ANKRD26Q9UPS8 1709 aa26.1■■□□□ 1.77
ACTN4-208ENST00000497637 IP6K1Q92551 441 aa26.09■■□□□ 1.77
ACTN4-208ENST00000497637 NUDCQ9Y266 331 aa26.09■■□□□ 1.77
ACTN4-208ENST00000497637 NME9Q86XW9 330 aa26.07■■□□□ 1.76
ACTN4-208ENST00000497637 RBM46Q8TBY0 533 aaKnown RBP26.07■■□□□ 1.76
ACTN4-208ENST00000497637 KIF20BQ96Q89 1820 aa26.05■■□□□ 1.76
ACTN4-208ENST00000497637 MON2Q7Z3U7 1717 aa26.05■■□□□ 1.76
ACTN4-208ENST00000497637 WWC3Q9ULE0 1092 aa26.04■■□□□ 1.76
ACTN4-208ENST00000497637 NEFLP07196 543 aa26.03■■□□□ 1.76
ACTN4-208ENST00000497637 NGEFQ8N5V2 710 aa26.03■■□□□ 1.76
ACTN4-208ENST00000497637 FSTL1Q12841 308 aa26.02■■□□□ 1.76
ACTN4-208ENST00000497637 C16orf71Q8IYS4 520 aaPredicted RBP26.02■■□□□ 1.76
ACTN4-208ENST00000497637 LTV1Q96GA3 475 aaPredicted RBP26.02■■□□□ 1.76
ACTN4-208ENST00000497637 AK7Q96M32 723 aa26.02■■□□□ 1.76
ACTN4-208ENST00000497637 SUPT16HQ9Y5B9 1047 aaKnown RBP26.02■■□□□ 1.76
ACTN4-208ENST00000497637 LTN1O94822 1766 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms