RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 SLFN14P0C7P3 912 aa15.71■□□□□ 0.11
VEGFA-215ENST00000497139 TSPYL1Q9H0U9 437 aa15.71■□□□□ 0.11
VEGFA-215ENST00000497139 ZNF830Q96NB3 372 aaPredicted RBP15.7■□□□□ 0.1
VEGFA-215ENST00000497139 SPAG9O60271 1321 aaKnown RBP15.7■□□□□ 0.1
VEGFA-215ENST00000497139 ABCA9Q8IUA7 1624 aa15.69■□□□□ 0.1
VEGFA-215ENST00000497139 NCBP1Q09161 790 aaKnown RBP15.69■□□□□ 0.1
VEGFA-215ENST00000497139 TIGD1Q96MW7 591 aa15.69■□□□□ 0.1
VEGFA-215ENST00000497139 QRICH2Q9H0J4 1663 aa15.69■□□□□ 0.1
VEGFA-215ENST00000497139 ABCC4O15439 1325 aa15.69■□□□□ 0.1
VEGFA-215ENST00000497139 SIRT2Q8IXJ6 389 aa15.69■□□□□ 0.1
VEGFA-215ENST00000497139 COL3A1P02461 1466 aaPredicted RBP15.68■□□□□ 0.1
VEGFA-215ENST00000497139 SMTNL1A8MU46 457 aa15.68■□□□□ 0.1
VEGFA-215ENST00000497139 CALCOCO1Q9P1Z2 691 aa15.68■□□□□ 0.1
VEGFA-215ENST00000497139 IRX5P78411 483 aaPredicted RBP15.68■□□□□ 0.1
VEGFA-215ENST00000497139 FAM177BA6PVY3 158 aa15.67■□□□□ 0.1
VEGFA-215ENST00000497139 MX1P20591 662 aa15.67■□□□□ 0.1
VEGFA-215ENST00000497139 TMX3Q96JJ7 454 aa15.67■□□□□ 0.1
VEGFA-215ENST00000497139 DCTPP1Q9H773 170 aa15.67■□□□□ 0.1
VEGFA-215ENST00000497139 TERF2Q15554 542 aa15.67■□□□□ 0.1
VEGFA-215ENST00000497139 C17orf53Q8N3J3 647 aaPredicted RBP15.67■□□□□ 0.1
VEGFA-215ENST00000497139 WDR33Q9C0J8 1336 aaKnown RBP15.66■□□□□ 0.1
VEGFA-215ENST00000497139 ERC2O15083 957 aa15.66■□□□□ 0.1
VEGFA-215ENST00000497139 PAXBP1Q9Y5B6 917 aa15.66■□□□□ 0.1
VEGFA-215ENST00000497139 KIF1BO60333 1816 aa15.66■□□□□ 0.1
VEGFA-215ENST00000497139 CFAP70Q5T0N1 1121 aa15.66■□□□□ 0.1
VEGFA-215ENST00000497139 KRT222Q8N1A0 295 aa15.66■□□□□ 0.1
VEGFA-215ENST00000497139 ATP7AQ04656 1500 aa15.65■□□□□ 0.1
VEGFA-215ENST00000497139 VWDEQ8N2E2 1590 aa15.65■□□□□ 0.1
VEGFA-215ENST00000497139 KCNJ4P48050 445 aa15.65■□□□□ 0.1
VEGFA-215ENST00000497139 ANAPC15P60006 121 aa15.65■□□□□ 0.1
VEGFA-215ENST00000497139 MRPL50Q8N5N7 158 aaKnown RBP15.65■□□□□ 0.1
VEGFA-215ENST00000497139 IL17RAQ96F46 866 aa15.65■□□□□ 0.1
VEGFA-215ENST00000497139 KCNF1Q9H3M0 494 aa15.65■□□□□ 0.1
VEGFA-215ENST00000497139 FANCAO15360 1455 aa15.64■□□□□ 0.09
VEGFA-215ENST00000497139 TULP2O00295 520 aa15.64■□□□□ 0.09
VEGFA-215ENST00000497139 AFAP1Q8N556 730 aa15.64■□□□□ 0.09
VEGFA-215ENST00000497139 USP48Q86UV5 1035 aa15.64■□□□□ 0.09
VEGFA-215ENST00000497139 KIF18AQ8NI77 898 aa15.64■□□□□ 0.09
VEGFA-215ENST00000497139 RTL1A6NKG5 1358 aa15.64■□□□□ 0.09
VEGFA-215ENST00000497139 CDC42BPGQ6DT37 1551 aa15.64■□□□□ 0.09
VEGFA-215ENST00000497139 ZBTB7CA1YPR0 619 aa15.63■□□□□ 0.09
VEGFA-215ENST00000497139 PYCARDQ9ULZ3 195 aa15.63■□□□□ 0.09
VEGFA-215ENST00000497139 HCLS1P14317 486 aaPredicted RBP15.63■□□□□ 0.09
VEGFA-215ENST00000497139 SDSP20132 328 aa15.63■□□□□ 0.09
VEGFA-215ENST00000497139 ASXL2Q76L83 1435 aa15.62■□□□□ 0.09
VEGFA-215ENST00000497139 IGSF3O75054 1194 aa15.62■□□□□ 0.09
VEGFA-215ENST00000497139 UBE2HP62256 183 aa15.62■□□□□ 0.09
VEGFA-215ENST00000497139 API5Q9BZZ5 524 aaKnown RBP15.62■□□□□ 0.09
VEGFA-215ENST00000497139 SLC12A5Q9H2X9 1139 aa15.62■□□□□ 0.09
VEGFA-215ENST00000497139 FAM53CQ9NYF3 392 aa15.62■□□□□ 0.09
VEGFA-215ENST00000497139 KNDC1Q76NI1 1749 aa15.62■□□□□ 0.09
VEGFA-215ENST00000497139 ANKRD26Q9UPS8 1709 aa15.62■□□□□ 0.09
VEGFA-215ENST00000497139 CHAMP1Q96JM3 812 aa15.62■□□□□ 0.09
VEGFA-215ENST00000497139 FUCA2Q9BTY2 467 aa15.62■□□□□ 0.09
VEGFA-215ENST00000497139 RGS12O14924 1447 aa15.62■□□□□ 0.09
VEGFA-215ENST00000497139 RPAP1Q9BWH6 1393 aaPredicted RBP15.61■□□□□ 0.09
VEGFA-215ENST00000497139 MCCP23508 829 aa15.61■□□□□ 0.09
VEGFA-215ENST00000497139 NEK4P51957 841 aa15.61■□□□□ 0.09
VEGFA-215ENST00000497139 C1orf115Q9H7X2 142 aa15.61■□□□□ 0.09
VEGFA-215ENST00000497139 GADD45BO75293 160 aaPredicted RBP15.61■□□□□ 0.09
VEGFA-215ENST00000497139 SSH2Q76I76 1423 aa15.61■□□□□ 0.09
VEGFA-215ENST00000497139 ZNF397Q8NF99 534 aaPredicted RBP15.6■□□□□ 0.09
VEGFA-215ENST00000497139 VGLL3A8MV65 326 aa15.59■□□□□ 0.09
VEGFA-215ENST00000497139 SLFNL1Q499Z3 407 aa15.59■□□□□ 0.09
VEGFA-215ENST00000497139 FAM135BQ49AJ0 1406 aa15.59■□□□□ 0.09
VEGFA-215ENST00000497139 EPB41L2O43491 1005 aaKnown RBP15.59■□□□□ 0.09
VEGFA-215ENST00000497139 FOXD4L5Q5VV16 416 aaPredicted RBP15.59■□□□□ 0.09
VEGFA-215ENST00000497139 MPNDQ8N594 471 aa15.59■□□□□ 0.09
VEGFA-215ENST00000497139 CCDC112Q8NEF3 446 aa15.59■□□□□ 0.09
VEGFA-215ENST00000497139 FOXD4L4Q8WXT5 416 aaPredicted RBP15.59■□□□□ 0.09
VEGFA-215ENST00000497139 ADGRF5Q8IZF2 1346 aa15.59■□□□□ 0.09
VEGFA-215ENST00000497139 VAMP4O75379 141 aa15.59■□□□□ 0.09
VEGFA-215ENST00000497139 RPAP2Q8IXW5 612 aaPredicted RBP15.59■□□□□ 0.09
VEGFA-215ENST00000497139 ANKRD44Q8N8A2 993 aa15.58■□□□□ 0.08
VEGFA-215ENST00000497139 OSBPL3Q9H4L5 887 aa15.58■□□□□ 0.08
VEGFA-215ENST00000497139 U2SURPO15042 1029 aaKnown RBP15.58■□□□□ 0.08
VEGFA-215ENST00000497139 ATP6V1DQ9Y5K8 247 aa15.58■□□□□ 0.08
VEGFA-215ENST00000497139 MROH1Q8NDA8 1641 aa15.57■□□□□ 0.08
VEGFA-215ENST00000497139 ZBTB22O15209 634 aa15.57■□□□□ 0.08
VEGFA-215ENST00000497139 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.57■□□□□ 0.08
VEGFA-215ENST00000497139 RNF20Q5VTR2 975 aa15.56■□□□□ 0.08
VEGFA-215ENST00000497139 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.56■□□□□ 0.08
VEGFA-215ENST00000497139 ATP10DQ9P241 1426 aa15.56■□□□□ 0.08
VEGFA-215ENST00000497139 ADGRB1O14514 1584 aa15.56■□□□□ 0.08
VEGFA-215ENST00000497139 CCDC192P0DO97 292 aa15.55■□□□□ 0.08
VEGFA-215ENST00000497139 PNPLA6Q8IY17 1366 aa15.55■□□□□ 0.08
VEGFA-215ENST00000497139 FCHSD2O94868 740 aa15.55■□□□□ 0.08
VEGFA-215ENST00000497139 SMARCA5O60264 1052 aaPredicted RBP15.54■□□□□ 0.08
VEGFA-215ENST00000497139 TNNT1P13805 278 aa15.54■□□□□ 0.08
VEGFA-215ENST00000497139 GNAI1P63096 354 aa15.54■□□□□ 0.08
VEGFA-215ENST00000497139 MROH2AA6NES4 1674 aa15.54■□□□□ 0.08
VEGFA-215ENST00000497139 SRCIN1Q9C0H9 1055 aa15.54■□□□□ 0.08
VEGFA-215ENST00000497139 IFT57Q9NWB7 429 aa15.54■□□□□ 0.08
VEGFA-215ENST00000497139 LRRC7Q96NW7 1537 aa15.53■□□□□ 0.08
VEGFA-215ENST00000497139 FAM200AQ8TCP9 573 aa15.53■□□□□ 0.08
VEGFA-215ENST00000497139 EVC2Q86UK5 1308 aa15.53■□□□□ 0.08
VEGFA-215ENST00000497139 ZFYVE9O95405 1425 aa15.53■□□□□ 0.08
VEGFA-215ENST00000497139 ADGRB3O60242 1522 aa15.53■□□□□ 0.08
VEGFA-215ENST00000497139 AP5Z1O43299 807 aa15.53■□□□□ 0.08
VEGFA-215ENST00000497139 GDPD2Q9HCC8 539 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms