RNA–Protein interactions for RNA: ENST00000497069.2

PMF1-205, Transcript of polyamine modulated factor 1, humanhuman

TSL 3

Gene PMF1, Length 837 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-205ENST00000497069 KRT27Q7Z3Y8 459 aa21.11■□□□□ 0.97
PMF1-205ENST00000497069 ZCRB1Q8TBF4 217 aaKnown RBP21.11■□□□□ 0.97
PMF1-205ENST00000497069 PARP4Q9UKK3 1724 aaKnown RBP21.1■□□□□ 0.97
PMF1-205ENST00000497069 SPG7Q9UQ90 795 aa21.1■□□□□ 0.97
PMF1-205ENST00000497069 TNS2Q63HR2 1409 aa21.1■□□□□ 0.97
PMF1-205ENST00000497069 PNNQ9H307 717 aaKnown RBP21.09■□□□□ 0.97
PMF1-205ENST00000497069 PLEKHG2Q9H7P9 1386 aa21.09■□□□□ 0.97
PMF1-205ENST00000497069 LRRC37A3O60309 1634 aa21.08■□□□□ 0.97
PMF1-205ENST00000497069 FCHSD2O94868 740 aa21.08■□□□□ 0.97
PMF1-205ENST00000497069 NEFMP07197 916 aa21.08■□□□□ 0.97
PMF1-205ENST00000497069 PLEKHO1Q53GL0 409 aaPredicted RBP21.08■□□□□ 0.97
PMF1-205ENST00000497069 AMOTQ4VCS5 1084 aa21.07■□□□□ 0.96
PMF1-205ENST00000497069 CCDC184Q52MB2 194 aa21.07■□□□□ 0.96
PMF1-205ENST00000497069 DDX54Q8TDD1 881 aaKnown RBP21.07■□□□□ 0.96
PMF1-205ENST00000497069 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.07■□□□□ 0.96
PMF1-205ENST00000497069 PRKAR2BP31323 418 aa21.06■□□□□ 0.96
PMF1-205ENST00000497069 RSPH6AQ9H0K4 717 aa21.06■□□□□ 0.96
PMF1-205ENST00000497069 PCDH11XQ9BZA7 1347 aa21.05■□□□□ 0.96
PMF1-205ENST00000497069 PCDH11YQ9BZA8 1340 aa21.05■□□□□ 0.96
PMF1-205ENST00000497069 ILDR2Q71H61 639 aa21.05■□□□□ 0.96
PMF1-205ENST00000497069 CCER2I3L3R5 266 aa21.03■□□□□ 0.96
PMF1-205ENST00000497069 MARCH10Q8NA82 808 aaPredicted RBP21.03■□□□□ 0.96
PMF1-205ENST00000497069 BRWD3Q6RI45 1802 aa21.03■□□□□ 0.96
PMF1-205ENST00000497069 FAM182BQ5T319 152 aa21.02■□□□□ 0.96
PMF1-205ENST00000497069 MIER1Q8N108 512 aa21.02■□□□□ 0.96
PMF1-205ENST00000497069 ADAMTS8Q9UP79 889 aa21.02■□□□□ 0.96
PMF1-205ENST00000497069 MAPK8IP3Q9UPT6 1336 aa21.02■□□□□ 0.95
PMF1-205ENST00000497069 C1orf141Q5JVX7 400 aa21.01■□□□□ 0.95
PMF1-205ENST00000497069 ZNF530Q6P9A1 599 aaPredicted RBP21.01■□□□□ 0.95
PMF1-205ENST00000497069 IFNL2Q8IZJ0 200 aa21.01■□□□□ 0.95
PMF1-205ENST00000497069 FAM196AQ6ZSG2 479 aa21■□□□□ 0.95
PMF1-205ENST00000497069 PNISRQ8TF01 805 aaKnown RBP21■□□□□ 0.95
PMF1-205ENST00000497069 PKD1L3Q7Z443 1732 aa21■□□□□ 0.95
PMF1-205ENST00000497069 CYP27B1O15528 508 aa20.99■□□□□ 0.95
PMF1-205ENST00000497069 GAS2L2Q8NHY3 880 aa20.99■□□□□ 0.95
PMF1-205ENST00000497069 PHKG2P15735 406 aa20.98■□□□□ 0.95
PMF1-205ENST00000497069 MTHFSDQ2M296 383 aaKnown RBP20.98■□□□□ 0.95
PMF1-205ENST00000497069 PHACTR3Q96KR7 559 aa20.98■□□□□ 0.95
PMF1-205ENST00000497069 HSP90AB1P08238 724 aaKnown RBP20.97■□□□□ 0.95
PMF1-205ENST00000497069 AKAP4Q5JQC9 854 aa20.96■□□□□ 0.95
PMF1-205ENST00000497069 CCDC146Q8IYE0 955 aa20.96■□□□□ 0.95
PMF1-205ENST00000497069 FAM9BQ8IZU0 186 aa20.96■□□□□ 0.95
PMF1-205ENST00000497069 RUNDC1Q96C34 613 aa20.96■□□□□ 0.95
PMF1-205ENST00000497069 PLEKHF1Q96S99 279 aa20.96■□□□□ 0.95
PMF1-205ENST00000497069 SHANK3Q9BYB0 1731 aa20.95■□□□□ 0.94
PMF1-205ENST00000497069 BCL9O00512 1426 aa20.94■□□□□ 0.94
PMF1-205ENST00000497069 NKX1-1Q15270 411 aaPredicted RBP20.93■□□□□ 0.94
PMF1-205ENST00000497069 ACSBG1Q96GR2 724 aa20.93■□□□□ 0.94
PMF1-205ENST00000497069 DCAF5Q96JK2 942 aa20.92■□□□□ 0.94
PMF1-205ENST00000497069 MAP3K5Q99683 1374 aa20.92■□□□□ 0.94
PMF1-205ENST00000497069 GNAT3A8MTJ3 354 aa20.91■□□□□ 0.94
PMF1-205ENST00000497069 NFE2L2Q16236 605 aa20.91■□□□□ 0.94
PMF1-205ENST00000497069 MPRIPQ6WCQ1 1025 aa20.91■□□□□ 0.94
PMF1-205ENST00000497069 RTF1Q92541 710 aaKnown RBP20.91■□□□□ 0.94
PMF1-205ENST00000497069 SYTL4Q96C24 671 aaPredicted RBP20.91■□□□□ 0.94
PMF1-205ENST00000497069 TRIM37O94972 964 aa20.9■□□□□ 0.94
PMF1-205ENST00000497069 PRIM1P49642 420 aaKnown RBP20.89■□□□□ 0.93
PMF1-205ENST00000497069 SF3B2Q13435 895 aaKnown RBP20.89■□□□□ 0.93
PMF1-205ENST00000497069 BCL11BQ9C0K0 894 aaPredicted RBP20.88■□□□□ 0.93
PMF1-205ENST00000497069 ERVV-2B6SEH9 535 aa20.87■□□□□ 0.93
PMF1-205ENST00000497069 HTATSF1O43719 755 aaKnown RBP20.87■□□□□ 0.93
PMF1-205ENST00000497069 TMPOP42166 694 aaKnown RBP20.87■□□□□ 0.93
PMF1-205ENST00000497069 CCDC125Q86Z20 511 aa20.87■□□□□ 0.93
PMF1-205ENST00000497069 RNMTO43148 476 aaKnown RBP20.86■□□□□ 0.93
PMF1-205ENST00000497069 KCNQ2O43526 872 aa20.86■□□□□ 0.93
PMF1-205ENST00000497069 RIPK4P57078 832 aa20.86■□□□□ 0.93
PMF1-205ENST00000497069 CABP4P57796 275 aa20.86■□□□□ 0.93
PMF1-205ENST00000497069 NEUROD2Q15784 382 aa20.86■□□□□ 0.93
PMF1-205ENST00000497069 APAF1O14727 1248 aa20.85■□□□□ 0.93
PMF1-205ENST00000497069 LMOD3Q0VAK6 560 aa20.85■□□□□ 0.93
PMF1-205ENST00000497069 LGR6Q9HBX8 967 aa20.85■□□□□ 0.93
PMF1-205ENST00000497069 TMOD3Q9NYL9 352 aa20.85■□□□□ 0.93
PMF1-205ENST00000497069 RRP7AQ9Y3A4 280 aaKnown RBP20.85■□□□□ 0.93
PMF1-205ENST00000497069 KDM6AO15550 1401 aaPredicted RBP20.85■□□□□ 0.93
PMF1-205ENST00000497069 DOT1LQ8TEK3 1739 aa20.84■□□□□ 0.93
PMF1-205ENST00000497069 UPF1Q92900 1129 aaKnown RBP eCLIP20.84■□□□□ 0.93
PMF1-205ENST00000497069 EP400Q96L91 3159 aa20.83■□□□□ 0.93
PMF1-205ENST00000497069 TEFQ10587 303 aa20.83■□□□□ 0.93
PMF1-205ENST00000497069 NHSQ6T4R5 1651 aa20.83■□□□□ 0.92
PMF1-205ENST00000497069 APBA3O96018 575 aa20.82■□□□□ 0.92
PMF1-205ENST00000497069 MCM10Q7L590 875 aa20.82■□□□□ 0.92
PMF1-205ENST00000497069 IL17REQ8NFR9 667 aa20.82■□□□□ 0.92
PMF1-205ENST00000497069 SLC52A2Q9HAB3 445 aa20.81■□□□□ 0.92
PMF1-205ENST00000497069 BAG6P46379 1132 aa20.8■□□□□ 0.92
PMF1-205ENST00000497069 DCTN1Q14203 1278 aa20.8■□□□□ 0.92
PMF1-205ENST00000497069 PTF1AQ7RTS3 328 aa20.8■□□□□ 0.92
PMF1-205ENST00000497069 NFATC2IPQ8NCF5 419 aa20.8■□□□□ 0.92
PMF1-205ENST00000497069 PIGBQ92521 554 aa20.8■□□□□ 0.92
PMF1-205ENST00000497069 TOGARAM1Q9Y4F4 1720 aa20.8■□□□□ 0.92
PMF1-205ENST00000497069 SBF2Q86WG5 1849 aa20.8■□□□□ 0.92
PMF1-205ENST00000497069 CEMIPQ8WUJ3 1361 aa20.78■□□□□ 0.92
PMF1-205ENST00000497069 SCN11AQ9UI33 1791 aa20.77■□□□□ 0.92
PMF1-205ENST00000497069 SOCS7O14512 581 aa20.77■□□□□ 0.92
PMF1-205ENST00000497069 SMARCC1Q92922 1105 aaPredicted RBP20.77■□□□□ 0.92
PMF1-205ENST00000497069 ADAMTS7Q9UKP4 1686 aa20.77■□□□□ 0.91
PMF1-205ENST00000497069 MRC1P22897 1456 aa20.76■□□□□ 0.91
PMF1-205ENST00000497069 SENP3-EIF4A1A0A087X0R7 540 aa20.76■□□□□ 0.91
PMF1-205ENST00000497069 KAT6BQ8WYB5 2073 aa20.76■□□□□ 0.91
PMF1-205ENST00000497069 TNS1Q9HBL0 1735 aaKnown RBP20.75■□□□□ 0.91
PMF1-205ENST00000497069 PLSCR1O15162 318 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms