RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 DDX10Q13206 875 aaKnown RBP30.73■■■□□ 2.51
CHRD-217ENST00000496527 IGSF1Q8N6C5 1336 aa30.73■■■□□ 2.51
CHRD-217ENST00000496527 SBF2Q86WG5 1849 aa30.7■■■□□ 2.51
CHRD-217ENST00000496527 IL13P35225 146 aa30.7■■■□□ 2.51
CHRD-217ENST00000496527 ACSBG1Q96GR2 724 aa30.7■■■□□ 2.51
CHRD-217ENST00000496527 PCDH11XQ9BZA7 1347 aa30.68■■■□□ 2.5
CHRD-217ENST00000496527 PCDH11YQ9BZA8 1340 aa30.68■■■□□ 2.5
CHRD-217ENST00000496527 EZH2Q15910 746 aaKnown RBP30.67■■■□□ 2.5
CHRD-217ENST00000496527 PTF1AQ7RTS3 328 aa30.67■■■□□ 2.5
CHRD-217ENST00000496527 CAMKK2Q96RR4 588 aa30.67■■■□□ 2.5
CHRD-217ENST00000496527 SPG7Q9UQ90 795 aa30.67■■■□□ 2.5
CHRD-217ENST00000496527 KCNQ2O43526 872 aa30.66■■■□□ 2.5
CHRD-217ENST00000496527 DIAPH1O60610 1272 aaKnown RBP30.66■■■□□ 2.5
CHRD-217ENST00000496527 SHANK3Q9BYB0 1731 aa30.64■■■□□ 2.5
CHRD-217ENST00000496527 PPP2R1AP30153 589 aa30.64■■■□□ 2.5
CHRD-217ENST00000496527 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.64■■■□□ 2.5
CHRD-217ENST00000496527 PARD3Q8TEW0 1356 aa30.64■■■□□ 2.5
CHRD-217ENST00000496527 SULT6B1Q6IMI4 303 aa30.63■■■□□ 2.49
CHRD-217ENST00000496527 CFAP53Q96M91 514 aa30.62■■■□□ 2.49
CHRD-217ENST00000496527 PLSCR1O15162 318 aa30.61■■■□□ 2.49
CHRD-217ENST00000496527 CYP27B1O15528 508 aa30.61■■■□□ 2.49
CHRD-217ENST00000496527 AEBP1Q8IUX7 1158 aa30.61■■■□□ 2.49
CHRD-217ENST00000496527 NHSQ6T4R5 1651 aa30.6■■■□□ 2.49
CHRD-217ENST00000496527 KAT6BQ8WYB5 2073 aa30.6■■■□□ 2.49
CHRD-217ENST00000496527 PLEKHG2Q9H7P9 1386 aa30.6■■■□□ 2.49
CHRD-217ENST00000496527 PKD1L3Q7Z443 1732 aa30.59■■■□□ 2.49
CHRD-217ENST00000496527 SYTL4Q96C24 671 aaPredicted RBP30.59■■■□□ 2.49
CHRD-217ENST00000496527 PRIM1P49642 420 aaKnown RBP30.58■■■□□ 2.49
CHRD-217ENST00000496527 PLEKHO1Q53GL0 409 aaPredicted RBP30.57■■■□□ 2.48
CHRD-217ENST00000496527 KDRP35968 1356 aa30.56■■■□□ 2.48
CHRD-217ENST00000496527 COL3A1P02461 1466 aaPredicted RBP30.56■■■□□ 2.48
CHRD-217ENST00000496527 AMOTQ4VCS5 1084 aa30.55■■■□□ 2.48
CHRD-217ENST00000496527 IFNL2Q8IZJ0 200 aa30.55■■■□□ 2.48
CHRD-217ENST00000496527 U2SURPO15042 1029 aaKnown RBP30.54■■■□□ 2.48
CHRD-217ENST00000496527 HMOX1P09601 288 aa30.54■■■□□ 2.48
CHRD-217ENST00000496527 ZNF316A6NFI3 1004 aaPredicted RBP30.52■■■□□ 2.48
CHRD-217ENST00000496527 PHKG2P15735 406 aa30.52■■■□□ 2.48
CHRD-217ENST00000496527 NKX1-1Q15270 411 aaPredicted RBP30.52■■■□□ 2.48
CHRD-217ENST00000496527 RALBP1Q15311 655 aa30.52■■■□□ 2.48
CHRD-217ENST00000496527 DOT1LQ8TEK3 1739 aa30.52■■■□□ 2.48
CHRD-217ENST00000496527 NUDCQ9Y266 331 aa30.5■■■□□ 2.47
CHRD-217ENST00000496527 RGPD3A6NKT7 1758 aaPredicted RBP30.5■■■□□ 2.47
CHRD-217ENST00000496527 RGPD4Q7Z3J3 1758 aa30.5■■■□□ 2.47
CHRD-217ENST00000496527 ZNF530Q6P9A1 599 aaPredicted RBP30.49■■■□□ 2.47
CHRD-217ENST00000496527 BTAF1O14981 1849 aa30.49■■■□□ 2.47
CHRD-217ENST00000496527 TXNRD1Q16881 649 aa30.48■■■□□ 2.47
CHRD-217ENST00000496527 RREB1Q92766 1687 aa30.48■■■□□ 2.47
CHRD-217ENST00000496527 NBPF14Q5TI25 921 aa30.47■■■□□ 2.47
CHRD-217ENST00000496527 PROM2Q8N271 834 aa30.47■■■□□ 2.47
CHRD-217ENST00000496527 HSP90AB1P08238 724 aaKnown RBP30.46■■■□□ 2.47
CHRD-217ENST00000496527 C1orf141Q5JVX7 400 aa30.46■■■□□ 2.47
CHRD-217ENST00000496527 MPRIPQ6WCQ1 1025 aa30.45■■■□□ 2.47
CHRD-217ENST00000496527 NUP188Q5SRE5 1749 aa30.43■■■□□ 2.46
CHRD-217ENST00000496527 PSDA5PKW4 1024 aaPredicted RBP30.42■■■□□ 2.46
CHRD-217ENST00000496527 U2AF1L5P0DN76 240 aaPredicted RBP30.41■■■□□ 2.46
CHRD-217ENST00000496527 U2AF1Q01081 240 aaKnown RBP eCLIP30.41■■■□□ 2.46
CHRD-217ENST00000496527 R3HDM1Q15032 1099 aaKnown RBP30.41■■■□□ 2.46
CHRD-217ENST00000496527 DCAF5Q96JK2 942 aa30.41■■■□□ 2.46
CHRD-217ENST00000496527 TOGARAM1Q9Y4F4 1720 aa30.39■■■□□ 2.46
CHRD-217ENST00000496527 TMOD3Q9NYL9 352 aa30.39■■■□□ 2.46
CHRD-217ENST00000496527 PIGBQ92521 554 aa30.38■■■□□ 2.45
CHRD-217ENST00000496527 MYBBP1AQ9BQG0 1328 aaKnown RBP30.38■■■□□ 2.45
CHRD-217ENST00000496527 ERVV-2B6SEH9 535 aa30.37■■■□□ 2.45
CHRD-217ENST00000496527 MTHFSDQ2M296 383 aaKnown RBP30.37■■■□□ 2.45
CHRD-217ENST00000496527 AKAP4Q5JQC9 854 aa30.37■■■□□ 2.45
CHRD-217ENST00000496527 SLC27A3Q5K4L6 730 aa30.37■■■□□ 2.45
CHRD-217ENST00000496527 PRKAR2BP31323 418 aa30.35■■■□□ 2.45
CHRD-217ENST00000496527 RSPH6AQ9H0K4 717 aa30.35■■■□□ 2.45
CHRD-217ENST00000496527 ITGB4P16144 1822 aa30.35■■■□□ 2.45
CHRD-217ENST00000496527 SMARCC1Q92922 1105 aaPredicted RBP30.34■■■□□ 2.45
CHRD-217ENST00000496527 PRKRIP1Q9H875 184 aaPredicted RBP30.34■■■□□ 2.45
CHRD-217ENST00000496527 KDM6AO15550 1401 aaPredicted RBP30.33■■■□□ 2.45
CHRD-217ENST00000496527 FCHSD2O94868 740 aa30.33■■■□□ 2.45
CHRD-217ENST00000496527 ANO8Q9HCE9 1232 aaPredicted RBP30.33■■■□□ 2.45
CHRD-217ENST00000496527 LRRC4BQ9NT99 713 aa30.33■■■□□ 2.45
CHRD-217ENST00000496527 CABP4P57796 275 aa30.32■■■□□ 2.44
CHRD-217ENST00000496527 STK32BQ9NY57 414 aa30.32■■■□□ 2.44
CHRD-217ENST00000496527 PALLDQ8WX93 1383 aa30.31■■■□□ 2.44
CHRD-217ENST00000496527 GAS2L2Q8NHY3 880 aa30.31■■■□□ 2.44
CHRD-217ENST00000496527 CCNL1Q9UK58 526 aaPredicted RBP30.31■■■□□ 2.44
CHRD-217ENST00000496527 KCNQ4P56696 695 aa30.29■■■□□ 2.44
CHRD-217ENST00000496527 LY75O60449 1722 aa30.28■■■□□ 2.44
CHRD-217ENST00000496527 SLC15A2Q16348 729 aa30.28■■■□□ 2.44
CHRD-217ENST00000496527 PHACTR3Q96KR7 559 aa30.28■■■□□ 2.44
CHRD-217ENST00000496527 ASAP1Q9ULH1 1129 aa30.27■■■□□ 2.44
CHRD-217ENST00000496527 RNMTO43148 476 aaKnown RBP30.26■■■□□ 2.43
CHRD-217ENST00000496527 LGR6Q9HBX8 967 aa30.26■■■□□ 2.43
CHRD-217ENST00000496527 NFATC2IPQ8NCF5 419 aa30.25■■■□□ 2.43
CHRD-217ENST00000496527 NEFMP07197 916 aa30.24■■■□□ 2.43
CHRD-217ENST00000496527 HMGB2P26583 209 aaKnown RBP30.24■■■□□ 2.43
CHRD-217ENST00000496527 ATG3Q9NT62 314 aa30.24■■■□□ 2.43
CHRD-217ENST00000496527 GNAT3A8MTJ3 354 aa30.23■■■□□ 2.43
CHRD-217ENST00000496527 MAP3K5Q99683 1374 aa30.23■■■□□ 2.43
CHRD-217ENST00000496527 PAPPAQ13219 1627 aa30.22■■■□□ 2.43
CHRD-217ENST00000496527 SCN11AQ9UI33 1791 aa30.21■■■□□ 2.43
CHRD-217ENST00000496527 ZNF827Q17R98 1081 aa30.21■■■□□ 2.43
CHRD-217ENST00000496527 PNNQ9H307 717 aaKnown RBP30.21■■■□□ 2.43
CHRD-217ENST00000496527 SLC52A2Q9HAB3 445 aa30.21■■■□□ 2.43
CHRD-217ENST00000496527 LOC102724428A0A0B4J2F2 783 aa30.2■■■□□ 2.43
CHRD-217ENST00000496527 SIK1P57059 783 aa30.2■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms