RNA–Protein interactions for RNA: ENST00000496269.1

PCOLCE-210, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 995 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-210ENST00000496269 BCL11BQ9C0K0 894 aaPredicted RBP30.26■■■□□ 2.43
PCOLCE-210ENST00000496269 BTAF1O14981 1849 aa30.25■■■□□ 2.43
PCOLCE-210ENST00000496269 MORC1Q86VD1 984 aa30.24■■■□□ 2.43
PCOLCE-210ENST00000496269 NPC1L1Q9UHC9 1359 aa30.23■■■□□ 2.43
PCOLCE-210ENST00000496269 EIF4A2Q14240 407 aaKnown RBP30.21■■■□□ 2.43
PCOLCE-210ENST00000496269 EYA1Q99502 592 aa30.21■■■□□ 2.43
PCOLCE-210ENST00000496269 KCNQ2O43526 872 aa30.2■■■□□ 2.43
PCOLCE-210ENST00000496269 ZCRB1Q8TBF4 217 aaKnown RBP30.2■■■□□ 2.43
PCOLCE-210ENST00000496269 PLSCR1O15162 318 aa30.19■■■□□ 2.42
PCOLCE-210ENST00000496269 DDX54Q8TDD1 881 aaKnown RBP30.17■■■□□ 2.42
PCOLCE-210ENST00000496269 RAPGEF4Q8WZA2 1011 aa30.17■■■□□ 2.42
PCOLCE-210ENST00000496269 TOGARAM1Q9Y4F4 1720 aa30.16■■■□□ 2.42
PCOLCE-210ENST00000496269 ACSBG1Q96GR2 724 aa30.16■■■□□ 2.42
PCOLCE-210ENST00000496269 TATP17735 454 aaPredicted RBP30.15■■■□□ 2.42
PCOLCE-210ENST00000496269 IGSF1Q8N6C5 1336 aa30.15■■■□□ 2.42
PCOLCE-210ENST00000496269 PROM2Q8N271 834 aa30.13■■■□□ 2.41
PCOLCE-210ENST00000496269 KAT6BQ8WYB5 2073 aa30.13■■■□□ 2.41
PCOLCE-210ENST00000496269 CC2D1BQ5T0F9 858 aaKnown RBP30.11■■■□□ 2.41
PCOLCE-210ENST00000496269 PAPPAQ13219 1627 aa30.11■■■□□ 2.41
PCOLCE-210ENST00000496269 PLEKHG2Q9H7P9 1386 aa30.1■■■□□ 2.41
PCOLCE-210ENST00000496269 LY75O60449 1722 aa30.08■■■□□ 2.41
PCOLCE-210ENST00000496269 PCDH11XQ9BZA7 1347 aa30.08■■■□□ 2.41
PCOLCE-210ENST00000496269 PCDH11YQ9BZA8 1340 aa30.08■■■□□ 2.41
PCOLCE-210ENST00000496269 PSDA5PKW4 1024 aaPredicted RBP30.08■■■□□ 2.41
PCOLCE-210ENST00000496269 CYP27B1O15528 508 aa30.08■■■□□ 2.41
PCOLCE-210ENST00000496269 ITGB4P16144 1822 aa30.08■■■□□ 2.41
PCOLCE-210ENST00000496269 LRP5O75197 1615 aa30.07■■■□□ 2.4
PCOLCE-210ENST00000496269 COL3A1P02461 1466 aaPredicted RBP30.07■■■□□ 2.4
PCOLCE-210ENST00000496269 SRCAPQ6ZRS2 3230 aa30.06■■■□□ 2.4
PCOLCE-210ENST00000496269 IL13P35225 146 aa30.05■■■□□ 2.4
PCOLCE-210ENST00000496269 MTHFSP49914 203 aa30.05■■■□□ 2.4
PCOLCE-210ENST00000496269 R3HDM1Q15032 1099 aaKnown RBP30.05■■■□□ 2.4
PCOLCE-210ENST00000496269 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.04■■■□□ 2.4
PCOLCE-210ENST00000496269 KDRP35968 1356 aa30.03■■■□□ 2.4
PCOLCE-210ENST00000496269 TXNRD1Q16881 649 aa30.03■■■□□ 2.4
PCOLCE-210ENST00000496269 ANO8Q9HCE9 1232 aaPredicted RBP30.03■■■□□ 2.4
PCOLCE-210ENST00000496269 PRIM1P49642 420 aaKnown RBP30.02■■■□□ 2.4
PCOLCE-210ENST00000496269 CASZ1Q86V15 1759 aa30.01■■■□□ 2.39
PCOLCE-210ENST00000496269 NKX1-1Q15270 411 aaPredicted RBP30■■■□□ 2.39
PCOLCE-210ENST00000496269 AEBP1Q8IUX7 1158 aa30■■■□□ 2.39
PCOLCE-210ENST00000496269 SPG7Q9UQ90 795 aa29.98■■■□□ 2.39
PCOLCE-210ENST00000496269 NBPF14Q5TI25 921 aa29.96■■■□□ 2.39
PCOLCE-210ENST00000496269 PHKG2P15735 406 aa29.94■■■□□ 2.38
PCOLCE-210ENST00000496269 SYTL4Q96C24 671 aaPredicted RBP29.94■■■□□ 2.38
PCOLCE-210ENST00000496269 LRRC4BQ9NT99 713 aa29.94■■■□□ 2.38
PCOLCE-210ENST00000496269 CNGB1Q14028 1251 aaPredicted RBP29.93■■■□□ 2.38
PCOLCE-210ENST00000496269 SULT6B1Q6IMI4 303 aa29.92■■■□□ 2.38
PCOLCE-210ENST00000496269 TUBGCP6Q96RT7 1819 aa29.92■■■□□ 2.38
PCOLCE-210ENST00000496269 QSER1Q2KHR3 1735 aa29.91■■■□□ 2.38
PCOLCE-210ENST00000496269 IFNL2Q8IZJ0 200 aa29.9■■■□□ 2.38
PCOLCE-210ENST00000496269 TAF1LQ8IZX4 1826 aa29.89■■■□□ 2.38
PCOLCE-210ENST00000496269 DIAPH1O60610 1272 aaKnown RBP29.88■■■□□ 2.37
PCOLCE-210ENST00000496269 KDM6AO15550 1401 aaPredicted RBP29.88■■■□□ 2.37
PCOLCE-210ENST00000496269 C5P01031 1676 aa29.86■■■□□ 2.37
PCOLCE-210ENST00000496269 SCN11AQ9UI33 1791 aa29.86■■■□□ 2.37
PCOLCE-210ENST00000496269 SLC27A3Q5K4L6 730 aa29.86■■■□□ 2.37
PCOLCE-210ENST00000496269 VIRMAQ69YN4 1812 aaKnown RBP29.86■■■□□ 2.37
PCOLCE-210ENST00000496269 PPP2R1AP30153 589 aa29.85■■■□□ 2.37
PCOLCE-210ENST00000496269 SLC15A2Q16348 729 aa29.85■■■□□ 2.37
PCOLCE-210ENST00000496269 AMOTQ4VCS5 1084 aa29.85■■■□□ 2.37
PCOLCE-210ENST00000496269 PLEKHO1Q53GL0 409 aaPredicted RBP29.85■■■□□ 2.37
PCOLCE-210ENST00000496269 PIGBQ92521 554 aa29.84■■■□□ 2.37
PCOLCE-210ENST00000496269 ADAMTS7Q9UKP4 1686 aa29.84■■■□□ 2.37
PCOLCE-210ENST00000496269 ZNF827Q17R98 1081 aa29.83■■■□□ 2.37
PCOLCE-210ENST00000496269 MPRIPQ6WCQ1 1025 aa29.83■■■□□ 2.37
PCOLCE-210ENST00000496269 PDGFDQ9GZP0 370 aaPredicted RBP29.83■■■□□ 2.37
PCOLCE-210ENST00000496269 ZNF530Q6P9A1 599 aaPredicted RBP29.82■■■□□ 2.36
PCOLCE-210ENST00000496269 AKT1S1Q96B36 256 aa29.82■■■□□ 2.36
PCOLCE-210ENST00000496269 PALLDQ8WX93 1383 aa29.81■■■□□ 2.36
PCOLCE-210ENST00000496269 HMOX1P09601 288 aa29.81■■■□□ 2.36
PCOLCE-210ENST00000496269 KCNQ4P56696 695 aa29.81■■■□□ 2.36
PCOLCE-210ENST00000496269 STK32BQ9NY57 414 aa29.81■■■□□ 2.36
PCOLCE-210ENST00000496269 ZNF831Q5JPB2 1677 aa29.77■■■□□ 2.36
PCOLCE-210ENST00000496269 DCAF5Q96JK2 942 aa29.77■■■□□ 2.36
PCOLCE-210ENST00000496269 HSP90AB1P08238 724 aaKnown RBP29.76■■■□□ 2.35
PCOLCE-210ENST00000496269 ZEB1P37275 1124 aaPredicted RBP29.76■■■□□ 2.35
PCOLCE-210ENST00000496269 CCNL1Q9UK58 526 aaPredicted RBP29.76■■■□□ 2.35
PCOLCE-210ENST00000496269 COL24A1Q17RW2 1714 aa29.76■■■□□ 2.35
PCOLCE-210ENST00000496269 MRC1P22897 1456 aa29.75■■■□□ 2.35
PCOLCE-210ENST00000496269 ERVV-2B6SEH9 535 aa29.75■■■□□ 2.35
PCOLCE-210ENST00000496269 TMOD3Q9NYL9 352 aa29.75■■■□□ 2.35
PCOLCE-210ENST00000496269 C4BP0C0L5 1744 aa29.74■■■□□ 2.35
PCOLCE-210ENST00000496269 SMARCC1Q92922 1105 aaPredicted RBP29.73■■■□□ 2.35
PCOLCE-210ENST00000496269 DDX10Q13206 875 aaKnown RBP29.72■■■□□ 2.35
PCOLCE-210ENST00000496269 CFAP53Q96M91 514 aa29.72■■■□□ 2.35
PCOLCE-210ENST00000496269 ASAP1Q9ULH1 1129 aa29.72■■■□□ 2.35
PCOLCE-210ENST00000496269 U2SURPO15042 1029 aaKnown RBP29.71■■■□□ 2.35
PCOLCE-210ENST00000496269 MTHFSDQ2M296 383 aaKnown RBP29.71■■■□□ 2.35
PCOLCE-210ENST00000496269 AKAP4Q5JQC9 854 aa29.71■■■□□ 2.35
PCOLCE-210ENST00000496269 C1orf141Q5JVX7 400 aa29.71■■■□□ 2.35
PCOLCE-210ENST00000496269 ATG3Q9NT62 314 aa29.71■■■□□ 2.35
PCOLCE-210ENST00000496269 UBR3Q6ZT12 1888 aa29.7■■■□□ 2.34
PCOLCE-210ENST00000496269 COL5A3P25940 1745 aaPredicted RBP29.69■■■□□ 2.34
PCOLCE-210ENST00000496269 CICQ96RK0 1608 aaPredicted RBP29.69■■■□□ 2.34
PCOLCE-210ENST00000496269 PNPLA7Q6ZV29 1317 aa29.69■■■□□ 2.34
PCOLCE-210ENST00000496269 RSPH6AQ9H0K4 717 aa29.68■■■□□ 2.34
PCOLCE-210ENST00000496269 SPON1Q9HCB6 807 aa29.67■■■□□ 2.34
PCOLCE-210ENST00000496269 SIPA1L3O60292 1781 aaPredicted RBP29.66■■■□□ 2.34
PCOLCE-210ENST00000496269 LOC102724428A0A0B4J2F2 783 aa29.65■■■□□ 2.34
PCOLCE-210ENST00000496269 ZBTB7AO95365 584 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms