RNA–Protein interactions for RNA: ENST00000495777.5

SORT1-208, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 391 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-208ENST00000495777 AMPHP49418 695 aa12.36□□□□□ -0.43
SORT1-208ENST00000495777 ZCRB1Q8TBF4 217 aaKnown RBP12.36□□□□□ -0.43
SORT1-208ENST00000495777 COL24A1Q17RW2 1714 aa12.36□□□□□ -0.43
SORT1-208ENST00000495777 QSER1Q2KHR3 1735 aa12.36□□□□□ -0.43
SORT1-208ENST00000495777 CGNL1Q0VF96 1302 aa12.36□□□□□ -0.43
SORT1-208ENST00000495777 FYB1O15117 783 aa12.35□□□□□ -0.43
SORT1-208ENST00000495777 GOLGB1Q14789 3259 aaKnown RBP12.35□□□□□ -0.43
SORT1-208ENST00000495777 POLD1P28340 1107 aa12.34□□□□□ -0.43
SORT1-208ENST00000495777 KCNQ4P56696 695 aa12.34□□□□□ -0.43
SORT1-208ENST00000495777 NBPF6Q5VWK0 638 aa12.34□□□□□ -0.43
SORT1-208ENST00000495777 CCER1Q8TC90 406 aaPredicted RBP12.34□□□□□ -0.43
SORT1-208ENST00000495777 SYTL4Q96C24 671 aaPredicted RBP12.34□□□□□ -0.43
SORT1-208ENST00000495777 NBPF4Q96M43 638 aa12.34□□□□□ -0.43
SORT1-208ENST00000495777 TFCP2L1Q9NZI6 479 aa12.34□□□□□ -0.43
SORT1-208ENST00000495777 SHANK3Q9BYB0 1731 aa12.34□□□□□ -0.43
SORT1-208ENST00000495777 RRS1Q15050 365 aaKnown RBP12.33□□□□□ -0.44
SORT1-208ENST00000495777 DOT1LQ8TEK3 1739 aa12.33□□□□□ -0.44
SORT1-208ENST00000495777 INSRP06213 1382 aa12.32□□□□□ -0.44
SORT1-208ENST00000495777 KIF24Q5T7B8 1368 aa12.32□□□□□ -0.44
SORT1-208ENST00000495777 LY75O60449 1722 aa12.32□□□□□ -0.44
SORT1-208ENST00000495777 GGNBP2Q9H3C7 697 aa12.32□□□□□ -0.44
SORT1-208ENST00000495777 CCNL1Q9UK58 526 aaPredicted RBP12.32□□□□□ -0.44
SORT1-208ENST00000495777 USP47Q96K76 1375 aa12.31□□□□□ -0.44
SORT1-208ENST00000495777 SMG6Q86US8 1419 aaKnown RBP12.31□□□□□ -0.44
SORT1-208ENST00000495777 TMF1P82094 1093 aa12.31□□□□□ -0.44
SORT1-208ENST00000495777 GPR162Q16538 588 aa12.31□□□□□ -0.44
SORT1-208ENST00000495777 HSP90AB2PQ58FF8 381 aa12.3□□□□□ -0.44
SORT1-208ENST00000495777 USHBP1Q8N6Y0 703 aa12.3□□□□□ -0.44
SORT1-208ENST00000495777 NLGN2Q8NFZ4 835 aa12.3□□□□□ -0.44
SORT1-208ENST00000495777 RAPGEF4Q8WZA2 1011 aa12.3□□□□□ -0.44
SORT1-208ENST00000495777 TIMELESSQ9UNS1 1208 aa12.3□□□□□ -0.44
SORT1-208ENST00000495777 TUBGCP6Q96RT7 1819 aa12.3□□□□□ -0.44
SORT1-208ENST00000495777 FLT4P35916 1363 aa12.3□□□□□ -0.44
SORT1-208ENST00000495777 NCAPD2Q15021 1401 aa12.29□□□□□ -0.44
SORT1-208ENST00000495777 TATP17735 454 aaPredicted RBP12.29□□□□□ -0.44
SORT1-208ENST00000495777 C1QTNF8P60827 252 aa12.29□□□□□ -0.44
SORT1-208ENST00000495777 COL23A1Q86Y22 540 aaPredicted RBP12.29□□□□□ -0.44
SORT1-208ENST00000495777 PCDH11XQ9BZA7 1347 aa12.29□□□□□ -0.44
SORT1-208ENST00000495777 PCDH11YQ9BZA8 1340 aa12.29□□□□□ -0.44
SORT1-208ENST00000495777 RGPD2P0DJD1 1756 aa12.28□□□□□ -0.44
SORT1-208ENST00000495777 CDCA8Q53HL2 280 aa12.28□□□□□ -0.44
SORT1-208ENST00000495777 CYP27B1O15528 508 aa12.27□□□□□ -0.45
SORT1-208ENST00000495777 HMGB2P26583 209 aaKnown RBP12.27□□□□□ -0.45
SORT1-208ENST00000495777 KLHL34Q8N239 644 aa12.27□□□□□ -0.45
SORT1-208ENST00000495777 CARD14Q9BXL6 1004 aa12.27□□□□□ -0.45
SORT1-208ENST00000495777 PALLDQ8WX93 1383 aa12.27□□□□□ -0.45
SORT1-208ENST00000495777 CHD4Q14839 1912 aa12.27□□□□□ -0.45
SORT1-208ENST00000495777 YBX3P16989 372 aaKnown RBP eCLIP12.26□□□□□ -0.45
SORT1-208ENST00000495777 FLAD1Q8NFF5 587 aa12.26□□□□□ -0.45
SORT1-208ENST00000495777 GRIN3BO60391 1043 aa12.25□□□□□ -0.45
SORT1-208ENST00000495777 NKX1-1Q15270 411 aaPredicted RBP12.25□□□□□ -0.45
SORT1-208ENST00000495777 MPRIPQ6WCQ1 1025 aa12.24□□□□□ -0.45
SORT1-208ENST00000495777 PELP1Q8IZL8 1130 aaKnown RBP12.24□□□□□ -0.45
SORT1-208ENST00000495777 KAT6BQ8WYB5 2073 aa12.24□□□□□ -0.45
SORT1-208ENST00000495777 SMARCC1Q92922 1105 aaPredicted RBP12.24□□□□□ -0.45
SORT1-208ENST00000495777 NSD3Q9BZ95 1437 aa12.24□□□□□ -0.45
SORT1-208ENST00000495777 CD2APQ9Y5K6 639 aa12.24□□□□□ -0.45
SORT1-208ENST00000495777 EMILIN1Q9Y6C2 1016 aa12.24□□□□□ -0.45
SORT1-208ENST00000495777 C5P01031 1676 aa12.23□□□□□ -0.45
SORT1-208ENST00000495777 WASHC2AQ641Q2 1341 aa12.23□□□□□ -0.45
SORT1-208ENST00000495777 SENP3-EIF4A1A0A087X0R7 540 aa12.23□□□□□ -0.45
SORT1-208ENST00000495777 MSH5O43196 834 aa12.23□□□□□ -0.45
SORT1-208ENST00000495777 ZEB1P37275 1124 aaPredicted RBP12.23□□□□□ -0.45
SORT1-208ENST00000495777 MSL1Q68DK7 614 aa12.23□□□□□ -0.45
SORT1-208ENST00000495777 AMIGO3Q86WK7 504 aa12.23□□□□□ -0.45
SORT1-208ENST00000495777 KIF20BQ96Q89 1820 aa12.23□□□□□ -0.45
SORT1-208ENST00000495777 PKD1L3Q7Z443 1732 aa12.23□□□□□ -0.45
SORT1-208ENST00000495777 TOGARAM1Q9Y4F4 1720 aa12.23□□□□□ -0.45
SORT1-208ENST00000495777 GIGYF1O75420 1035 aaPredicted RBP12.22□□□□□ -0.45
SORT1-208ENST00000495777 PIGBQ92521 554 aa12.22□□□□□ -0.45
SORT1-208ENST00000495777 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.22□□□□□ -0.45
SORT1-208ENST00000495777 ANKRD26Q9UPS8 1709 aa12.21□□□□□ -0.45
SORT1-208ENST00000495777 C4BP0C0L5 1744 aa12.2□□□□□ -0.46
SORT1-208ENST00000495777 PLEKHG2Q9H7P9 1386 aa12.2□□□□□ -0.46
SORT1-208ENST00000495777 AK7Q96M32 723 aa12.2□□□□□ -0.46
SORT1-208ENST00000495777 EYA1Q99502 592 aa12.2□□□□□ -0.46
SORT1-208ENST00000495777 SPG7Q9UQ90 795 aa12.2□□□□□ -0.46
SORT1-208ENST00000495777 ADCY9O60503 1353 aa12.19□□□□□ -0.46
SORT1-208ENST00000495777 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.19□□□□□ -0.46
SORT1-208ENST00000495777 LOC102724428A0A0B4J2F2 783 aa12.19□□□□□ -0.46
SORT1-208ENST00000495777 SSFA2P28290 1259 aa12.19□□□□□ -0.46
SORT1-208ENST00000495777 SIK1P57059 783 aa12.19□□□□□ -0.46
SORT1-208ENST00000495777 POLKQ9UBT6 870 aa12.19□□□□□ -0.46
SORT1-208ENST00000495777 TAF1LQ8IZX4 1826 aa12.18□□□□□ -0.46
SORT1-208ENST00000495777 LINC00116Q8NCU8 138 aa12.18□□□□□ -0.46
SORT1-208ENST00000495777 ATP10DQ9P241 1426 aa12.18□□□□□ -0.46
SORT1-208ENST00000495777 MAP2P11137 1827 aaKnown RBP12.18□□□□□ -0.46
SORT1-208ENST00000495777 CEP350Q5VT06 3117 aa12.17□□□□□ -0.46
SORT1-208ENST00000495777 PPM1GO15355 546 aaPredicted RBP12.17□□□□□ -0.46
SORT1-208ENST00000495777 PHKG2P15735 406 aa12.17□□□□□ -0.46
SORT1-208ENST00000495777 ITPK1Q13572 414 aa12.17□□□□□ -0.46
SORT1-208ENST00000495777 PHF14O94880 888 aa12.16□□□□□ -0.46
SORT1-208ENST00000495777 SMIM5Q71RC9 77 aa12.16□□□□□ -0.46
SORT1-208ENST00000495777 IFNL2Q8IZJ0 200 aa12.16□□□□□ -0.46
SORT1-208ENST00000495777 TMOD3Q9NYL9 352 aa12.16□□□□□ -0.46
SORT1-208ENST00000495777 ASAP1Q9ULH1 1129 aa12.16□□□□□ -0.46
SORT1-208ENST00000495777 KDRP35968 1356 aa12.16□□□□□ -0.46
SORT1-208ENST00000495777 ITGB4P16144 1822 aa12.16□□□□□ -0.46
SORT1-208ENST00000495777 UBR3Q6ZT12 1888 aa12.15□□□□□ -0.46
SORT1-208ENST00000495777 EIF4A2Q14240 407 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms