RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 GBP4Q96PP9 640 aa16.15■□□□□ 0.18
PTPN7-217ENST00000495688 AGLP35573 1532 aa16.15■□□□□ 0.18
PTPN7-217ENST00000495688 ROBO2Q9HCK4 1378 aa16.15■□□□□ 0.18
PTPN7-217ENST00000495688 ANKRD44Q8N8A2 993 aa16.14■□□□□ 0.17
PTPN7-217ENST00000495688 TTC21BQ7Z4L5 1316 aa16.14■□□□□ 0.17
PTPN7-217ENST00000495688 FOXO3O43524 673 aa16.14■□□□□ 0.17
PTPN7-217ENST00000495688 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.14■□□□□ 0.17
PTPN7-217ENST00000495688 ACEP12821 1306 aa16.14■□□□□ 0.17
PTPN7-217ENST00000495688 DIP2BQ9P265 1576 aa16.13■□□□□ 0.17
PTPN7-217ENST00000495688 AKAP12Q02952 1782 aa16.13■□□□□ 0.17
PTPN7-217ENST00000495688 SLC4A2P04920 1241 aa16.12■□□□□ 0.17
PTPN7-217ENST00000495688 ITSN1Q15811 1721 aa16.12■□□□□ 0.17
PTPN7-217ENST00000495688 SDSP20132 328 aa16.12■□□□□ 0.17
PTPN7-217ENST00000495688 RTL1A6NKG5 1358 aa16.12■□□□□ 0.17
PTPN7-217ENST00000495688 USP26Q9BXU7 913 aa16.12■□□□□ 0.17
PTPN7-217ENST00000495688 KIF24Q5T7B8 1368 aa16.11■□□□□ 0.17
PTPN7-217ENST00000495688 REREQ9P2R6 1566 aa16.11■□□□□ 0.17
PTPN7-217ENST00000495688 F6X3S4 739 aa16.11■□□□□ 0.17
PTPN7-217ENST00000495688 G2E3Q7L622 706 aa16.11■□□□□ 0.17
PTPN7-217ENST00000495688 ESF1Q9H501 851 aaKnown RBP16.11■□□□□ 0.17
PTPN7-217ENST00000495688 TECPR2O15040 1411 aa16.1■□□□□ 0.17
PTPN7-217ENST00000495688 SLC4A10Q6U841 1118 aa16.1■□□□□ 0.17
PTPN7-217ENST00000495688 RPAP2Q8IXW5 612 aaPredicted RBP16.1■□□□□ 0.17
PTPN7-217ENST00000495688 PKP1Q13835 747 aa16.1■□□□□ 0.17
PTPN7-217ENST00000495688 NRKQ7Z2Y5 1582 aa16.09■□□□□ 0.17
PTPN7-217ENST00000495688 PEAK1Q9H792 1746 aa16.09■□□□□ 0.17
PTPN7-217ENST00000495688 OVOS2A0A0J9YW53 1432 aa16.08■□□□□ 0.17
PTPN7-217ENST00000495688 OVOS2Q6IE36 1432 aa16.08■□□□□ 0.17
PTPN7-217ENST00000495688 SIRT1Q96EB6 747 aa16.08■□□□□ 0.16
PTPN7-217ENST00000495688 MAP3K19Q56UN5 1328 aa16.08■□□□□ 0.16
PTPN7-217ENST00000495688 RABEP1Q15276 862 aa16.08■□□□□ 0.16
PTPN7-217ENST00000495688 MTHFSDQ2M296 383 aaKnown RBP16.08■□□□□ 0.16
PTPN7-217ENST00000495688 CRB1P82279 1406 aa16.07■□□□□ 0.16
PTPN7-217ENST00000495688 BAG4O95429 457 aaKnown RBP16.07■□□□□ 0.16
PTPN7-217ENST00000495688 TSHZ3Q63HK5 1081 aa16.07■□□□□ 0.16
PTPN7-217ENST00000495688 KIAA0232Q92628 1395 aa16.07■□□□□ 0.16
PTPN7-217ENST00000495688 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.07■□□□□ 0.16
PTPN7-217ENST00000495688 PTPRCP08575 1304 aa16.07■□□□□ 0.16
PTPN7-217ENST00000495688 SLC26A8Q96RN1 970 aa16.06■□□□□ 0.16
PTPN7-217ENST00000495688 ERBB4Q15303 1308 aa16.06■□□□□ 0.16
PTPN7-217ENST00000495688 RIMS1Q86UR5 1692 aaKnown RBP16.06■□□□□ 0.16
PTPN7-217ENST00000495688 LTKP29376 864 aa16.06■□□□□ 0.16
PTPN7-217ENST00000495688 SKOR2Q2VWA4 1001 aaPredicted RBP16.06■□□□□ 0.16
PTPN7-217ENST00000495688 TSPYL4Q9UJ04 414 aa16.06■□□□□ 0.16
PTPN7-217ENST00000495688 HAP1P54257 671 aaPredicted RBP16.05■□□□□ 0.16
PTPN7-217ENST00000495688 ZGPATQ8N5A5 531 aaKnown RBP16.05■□□□□ 0.16
PTPN7-217ENST00000495688 TMEM2Q9UHN6 1383 aa16.05■□□□□ 0.16
PTPN7-217ENST00000495688 USP6P35125 1406 aa16.05■□□□□ 0.16
PTPN7-217ENST00000495688 HDGFP51858 240 aaKnown RBP16.05■□□□□ 0.16
PTPN7-217ENST00000495688 DDX49Q9Y6V7 483 aaKnown RBP16.05■□□□□ 0.16
PTPN7-217ENST00000495688 ADAMTS13Q76LX8 1427 aa16.05■□□□□ 0.16
PTPN7-217ENST00000495688 NECTIN2Q92692 538 aa16.04■□□□□ 0.16
PTPN7-217ENST00000495688 EXOC6BQ9Y2D4 811 aa16.04■□□□□ 0.16
PTPN7-217ENST00000495688 TNRQ92752 1358 aa16.04■□□□□ 0.16
PTPN7-217ENST00000495688 PLEKHG3A1L390 1219 aa16.04■□□□□ 0.16
PTPN7-217ENST00000495688 MCTP1Q6DN14 999 aa16.04■□□□□ 0.16
PTPN7-217ENST00000495688 CLCN1P35523 988 aa16.03■□□□□ 0.16
PTPN7-217ENST00000495688 CHAMP1Q96JM3 812 aa16.03■□□□□ 0.16
PTPN7-217ENST00000495688 ISY1Q9ULR0 285 aaKnown RBP16.03■□□□□ 0.16
PTPN7-217ENST00000495688 RTF1Q92541 710 aaKnown RBP16.03■□□□□ 0.16
PTPN7-217ENST00000495688 GOLGA6L22H0YM25 854 aa16.02■□□□□ 0.16
PTPN7-217ENST00000495688 CLEC17AQ6ZS10 378 aa16.02■□□□□ 0.16
PTPN7-217ENST00000495688 RGPD1P0DJD0 1748 aa16.02■□□□□ 0.16
PTPN7-217ENST00000495688 PDE1AP54750 535 aa16.02■□□□□ 0.16
PTPN7-217ENST00000495688 CASC1Q6TDU7 716 aa16.02■□□□□ 0.15
PTPN7-217ENST00000495688 EYA1Q99502 592 aa16.01■□□□□ 0.15
PTPN7-217ENST00000495688 USP31Q70CQ4 1352 aa16.01■□□□□ 0.15
PTPN7-217ENST00000495688 CYP2E1P05181 493 aaPredicted RBP16.01■□□□□ 0.15
PTPN7-217ENST00000495688 KLHL40Q2TBA0 621 aa16.01■□□□□ 0.15
PTPN7-217ENST00000495688 ESPNB1AK53 854 aa16■□□□□ 0.15
PTPN7-217ENST00000495688 NCLP19338 710 aaKnown RBP16■□□□□ 0.15
PTPN7-217ENST00000495688 ERC2O15083 957 aa16■□□□□ 0.15
PTPN7-217ENST00000495688 HMMRO75330 724 aa16■□□□□ 0.15
PTPN7-217ENST00000495688 TOPAZ1Q8N9V7 1692 aa15.99■□□□□ 0.15
PTPN7-217ENST00000495688 PTPRUQ92729 1446 aa15.99■□□□□ 0.15
PTPN7-217ENST00000495688 PNMA6EA0A0J9YXQ4 647 aa15.99■□□□□ 0.15
PTPN7-217ENST00000495688 ST18O60284 1047 aa15.99■□□□□ 0.15
PTPN7-217ENST00000495688 REC8O95072 547 aa15.99■□□□□ 0.15
PTPN7-217ENST00000495688 PTMSP20962 102 aa15.99■□□□□ 0.15
PTPN7-217ENST00000495688 PLPPR3Q6T4P5 718 aa15.99■□□□□ 0.15
PTPN7-217ENST00000495688 NAP1L5Q96NT1 182 aaPredicted RBP15.99■□□□□ 0.15
PTPN7-217ENST00000495688 UBR1Q8IWV7 1749 aa15.99■□□□□ 0.15
PTPN7-217ENST00000495688 NALCNQ8IZF0 1738 aa15.99■□□□□ 0.15
PTPN7-217ENST00000495688 CEP170BQ9Y4F5 1589 aaPredicted RBP15.99■□□□□ 0.15
PTPN7-217ENST00000495688 CEBPAP49715 358 aaPredicted RBP15.99■□□□□ 0.15
PTPN7-217ENST00000495688 NUCB2P80303 420 aa15.99■□□□□ 0.15
PTPN7-217ENST00000495688 CAVIN1Q6NZI2 390 aaKnown RBP15.99■□□□□ 0.15
PTPN7-217ENST00000495688 TRIM44Q96DX7 344 aaPredicted RBP15.99■□□□□ 0.15
PTPN7-217ENST00000495688 ZDHHC9Q9Y397 364 aa15.99■□□□□ 0.15
PTPN7-217ENST00000495688 SSH2Q76I76 1423 aa15.98■□□□□ 0.15
PTPN7-217ENST00000495688 ARHGEF10O15013 1369 aa15.98■□□□□ 0.15
PTPN7-217ENST00000495688 AMPHP49418 695 aa15.98■□□□□ 0.15
PTPN7-217ENST00000495688 CCT4P50991 539 aaKnown RBP15.98■□□□□ 0.15
PTPN7-217ENST00000495688 FOXD4L5Q5VV16 416 aaPredicted RBP15.98■□□□□ 0.15
PTPN7-217ENST00000495688 NUTM2GQ5VZR2 741 aa15.98■□□□□ 0.15
PTPN7-217ENST00000495688 FOXD4L4Q8WXT5 416 aaPredicted RBP15.98■□□□□ 0.15
PTPN7-217ENST00000495688 LMBRD1Q9NUN5 540 aa15.98■□□□□ 0.15
PTPN7-217ENST00000495688 GNAI2P04899 355 aa15.98■□□□□ 0.15
PTPN7-217ENST00000495688 FKBP5Q13451 457 aaPredicted RBP15.98■□□□□ 0.15
PTPN7-217ENST00000495688 NGDNQ8NEJ9 315 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms