RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 U2SURPO15042 1029 aaKnown RBP26.13■■□□□ 1.77
HDAC4-212ENST00000495497 HMOX1P09601 288 aa26.13■■□□□ 1.77
HDAC4-212ENST00000495497 FAM196AQ6ZSG2 479 aa26.13■■□□□ 1.77
HDAC4-212ENST00000495497 MYBBP1AQ9BQG0 1328 aaKnown RBP26.12■■□□□ 1.77
HDAC4-212ENST00000495497 EP400Q96L91 3159 aa26.11■■□□□ 1.77
HDAC4-212ENST00000495497 RGPD1P0DJD0 1748 aa26.11■■□□□ 1.77
HDAC4-212ENST00000495497 TRIM37O94972 964 aa26.08■■□□□ 1.77
HDAC4-212ENST00000495497 KDRP35968 1356 aa26.07■■□□□ 1.76
HDAC4-212ENST00000495497 ACSBG1Q96GR2 724 aa26.06■■□□□ 1.76
HDAC4-212ENST00000495497 CYP27B1O15528 508 aa26.05■■□□□ 1.76
HDAC4-212ENST00000495497 SPG7Q9UQ90 795 aa26.05■■□□□ 1.76
HDAC4-212ENST00000495497 NUDCQ9Y266 331 aa26.05■■□□□ 1.76
HDAC4-212ENST00000495497 PTF1AQ7RTS3 328 aa26.04■■□□□ 1.76
HDAC4-212ENST00000495497 SHANK3Q9BYB0 1731 aa26.04■■□□□ 1.76
HDAC4-212ENST00000495497 PCDH11XQ9BZA7 1347 aa26.04■■□□□ 1.76
HDAC4-212ENST00000495497 PCDH11YQ9BZA8 1340 aa26.04■■□□□ 1.76
HDAC4-212ENST00000495497 ANP32CO43423 234 aa26.02■■□□□ 1.76
HDAC4-212ENST00000495497 U2AF1L5P0DN76 240 aaPredicted RBP26.02■■□□□ 1.76
HDAC4-212ENST00000495497 U2AF1Q01081 240 aaKnown RBP eCLIP26.02■■□□□ 1.76
HDAC4-212ENST00000495497 PLEKHO1Q53GL0 409 aaPredicted RBP26.02■■□□□ 1.76
HDAC4-212ENST00000495497 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.02■■□□□ 1.76
HDAC4-212ENST00000495497 KCNQ2O43526 872 aa26.01■■□□□ 1.75
HDAC4-212ENST00000495497 BCL9O00512 1426 aa26■■□□□ 1.75
HDAC4-212ENST00000495497 SF3B2Q13435 895 aaKnown RBP26■■□□□ 1.75
HDAC4-212ENST00000495497 CCDC125Q86Z20 511 aa26■■□□□ 1.75
HDAC4-212ENST00000495497 PKD1L3Q7Z443 1732 aa26■■□□□ 1.75
HDAC4-212ENST00000495497 DEFB132Q7Z7B7 95 aa25.99■■□□□ 1.75
HDAC4-212ENST00000495497 PHKG2P15735 406 aa25.98■■□□□ 1.75
HDAC4-212ENST00000495497 AMOTQ4VCS5 1084 aa25.98■■□□□ 1.75
HDAC4-212ENST00000495497 ZNF530Q6P9A1 599 aaPredicted RBP25.98■■□□□ 1.75
HDAC4-212ENST00000495497 RSPH6AQ9H0K4 717 aa25.98■■□□□ 1.75
HDAC4-212ENST00000495497 IFNL2Q8IZJ0 200 aa25.97■■□□□ 1.75
HDAC4-212ENST00000495497 APBA3O96018 575 aa25.96■■□□□ 1.75
HDAC4-212ENST00000495497 PRKAR2BP31323 418 aa25.96■■□□□ 1.75
HDAC4-212ENST00000495497 BCL11BQ9C0K0 894 aaPredicted RBP25.96■■□□□ 1.75
HDAC4-212ENST00000495497 CCDC184Q52MB2 194 aa25.95■■□□□ 1.74
HDAC4-212ENST00000495497 PLEKHG2Q9H7P9 1386 aa25.95■■□□□ 1.74
HDAC4-212ENST00000495497 PRIM1P49642 420 aaKnown RBP25.94■■□□□ 1.74
HDAC4-212ENST00000495497 MTHFSDQ2M296 383 aaKnown RBP25.94■■□□□ 1.74
HDAC4-212ENST00000495497 SYTL4Q96C24 671 aaPredicted RBP25.94■■□□□ 1.74
HDAC4-212ENST00000495497 PHACTR3Q96KR7 559 aa25.94■■□□□ 1.74
HDAC4-212ENST00000495497 EN1Q05925 392 aaPredicted RBP25.93■■□□□ 1.74
HDAC4-212ENST00000495497 NKX1-1Q15270 411 aaPredicted RBP25.93■■□□□ 1.74
HDAC4-212ENST00000495497 SBF2Q86WG5 1849 aa25.93■■□□□ 1.74
HDAC4-212ENST00000495497 TNS1Q9HBL0 1735 aaKnown RBP25.92■■□□□ 1.74
HDAC4-212ENST00000495497 FCHSD2O94868 740 aa25.92■■□□□ 1.74
HDAC4-212ENST00000495497 BAG6P46379 1132 aa25.91■■□□□ 1.74
HDAC4-212ENST00000495497 C1orf141Q5JVX7 400 aa25.91■■□□□ 1.74
HDAC4-212ENST00000495497 NHSQ6T4R5 1651 aa25.88■■□□□ 1.73
HDAC4-212ENST00000495497 EZH2Q15910 746 aaKnown RBP25.88■■□□□ 1.73
HDAC4-212ENST00000495497 MPRIPQ6WCQ1 1025 aa25.88■■□□□ 1.73
HDAC4-212ENST00000495497 DOT1LQ8TEK3 1739 aa25.88■■□□□ 1.73
HDAC4-212ENST00000495497 AKAP4Q5JQC9 854 aa25.87■■□□□ 1.73
HDAC4-212ENST00000495497 CAMKK2Q96RR4 588 aa25.87■■□□□ 1.73
HDAC4-212ENST00000495497 WDR43Q15061 677 aaKnown RBP eCLIP25.86■■□□□ 1.73
HDAC4-212ENST00000495497 HSP90AB1P08238 724 aaKnown RBP25.85■■□□□ 1.73
HDAC4-212ENST00000495497 DCAF5Q96JK2 942 aa25.85■■□□□ 1.73
HDAC4-212ENST00000495497 PLEKHF1Q96S99 279 aa25.85■■□□□ 1.73
HDAC4-212ENST00000495497 KDM6AO15550 1401 aaPredicted RBP25.85■■□□□ 1.73
HDAC4-212ENST00000495497 TOGARAM1Q9Y4F4 1720 aa25.85■■□□□ 1.73
HDAC4-212ENST00000495497 GAS2L2Q8NHY3 880 aa25.84■■□□□ 1.73
HDAC4-212ENST00000495497 LGR6Q9HBX8 967 aa25.84■■□□□ 1.73
HDAC4-212ENST00000495497 ADAMTS8Q9UP79 889 aa25.84■■□□□ 1.73
HDAC4-212ENST00000495497 KAT6BQ8WYB5 2073 aa25.84■■□□□ 1.73
HDAC4-212ENST00000495497 PLSCR1O15162 318 aa25.82■■□□□ 1.72
HDAC4-212ENST00000495497 CCDC146Q8IYE0 955 aa25.82■■□□□ 1.72
HDAC4-212ENST00000495497 PIGBQ92521 554 aa25.82■■□□□ 1.72
HDAC4-212ENST00000495497 MRS2Q9HD23 443 aa25.82■■□□□ 1.72
HDAC4-212ENST00000495497 RNMTO43148 476 aaKnown RBP25.8■■□□□ 1.72
HDAC4-212ENST00000495497 TMOD3Q9NYL9 352 aa25.8■■□□□ 1.72
HDAC4-212ENST00000495497 BTAF1O14981 1849 aa25.79■■□□□ 1.72
HDAC4-212ENST00000495497 GNAT3A8MTJ3 354 aa25.79■■□□□ 1.72
HDAC4-212ENST00000495497 ERVV-2B6SEH9 535 aa25.79■■□□□ 1.72
HDAC4-212ENST00000495497 DIEXFQ68CQ4 756 aaKnown RBP25.79■■□□□ 1.72
HDAC4-212ENST00000495497 PROM2Q8N271 834 aa25.79■■□□□ 1.72
HDAC4-212ENST00000495497 PNNQ9H307 717 aaKnown RBP25.79■■□□□ 1.72
HDAC4-212ENST00000495497 NEFMP07197 916 aa25.78■■□□□ 1.72
HDAC4-212ENST00000495497 CABP4P57796 275 aa25.78■■□□□ 1.72
HDAC4-212ENST00000495497 MAP3K5Q99683 1374 aa25.78■■□□□ 1.72
HDAC4-212ENST00000495497 MAPK8IP3Q9UPT6 1336 aa25.77■■□□□ 1.72
HDAC4-212ENST00000495497 TXNRD1Q16881 649 aa25.76■■□□□ 1.71
HDAC4-212ENST00000495497 NFATC2IPQ8NCF5 419 aa25.76■■□□□ 1.71
HDAC4-212ENST00000495497 IL17REQ8NFR9 667 aa25.76■■□□□ 1.71
HDAC4-212ENST00000495497 ITGB4P16144 1822 aa25.75■■□□□ 1.71
HDAC4-212ENST00000495497 PNISRQ8TF01 805 aaKnown RBP25.75■■□□□ 1.71
HDAC4-212ENST00000495497 NFE2L2Q16236 605 aa25.74■■□□□ 1.71
HDAC4-212ENST00000495497 ASAP1Q9ULH1 1129 aa25.74■■□□□ 1.71
HDAC4-212ENST00000495497 KCNQ4P56696 695 aa25.73■■□□□ 1.71
HDAC4-212ENST00000495497 DCTN1Q14203 1278 aa25.73■■□□□ 1.71
HDAC4-212ENST00000495497 RUNDC1Q96C34 613 aa25.73■■□□□ 1.71
HDAC4-212ENST00000495497 SLC52A2Q9HAB3 445 aa25.73■■□□□ 1.71
HDAC4-212ENST00000495497 MCM10Q7L590 875 aa25.72■■□□□ 1.71
HDAC4-212ENST00000495497 ATG3Q9NT62 314 aa25.72■■□□□ 1.71
HDAC4-212ENST00000495497 RRP7AQ9Y3A4 280 aaKnown RBP25.71■■□□□ 1.71
HDAC4-212ENST00000495497 PALLDQ8WX93 1383 aa25.7■■□□□ 1.71
HDAC4-212ENST00000495497 SCN11AQ9UI33 1791 aa25.7■■□□□ 1.7
HDAC4-212ENST00000495497 RTF1Q92541 710 aaKnown RBP25.7■■□□□ 1.7
HDAC4-212ENST00000495497 LRRC4BQ9NT99 713 aa25.7■■□□□ 1.7
HDAC4-212ENST00000495497 SMARCC1Q92922 1105 aaPredicted RBP25.69■■□□□ 1.7
HDAC4-212ENST00000495497 TMPOP42166 694 aaKnown RBP25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms