RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 RAPGEF4Q8WZA2 1011 aa23.23■■□□□ 1.31
SNX17-209ENST00000494893 TATP17735 454 aaPredicted RBP23.22■■□□□ 1.31
SNX17-209ENST00000494893 SF3B2Q13435 895 aaKnown RBP23.22■■□□□ 1.31
SNX17-209ENST00000494893 DDX54Q8TDD1 881 aaKnown RBP23.22■■□□□ 1.31
SNX17-209ENST00000494893 EN1Q05925 392 aaPredicted RBP23.2■■□□□ 1.3
SNX17-209ENST00000494893 AEBP1Q8IUX7 1158 aa23.2■■□□□ 1.3
SNX17-209ENST00000494893 PKD1L3Q7Z443 1732 aa23.19■■□□□ 1.3
SNX17-209ENST00000494893 PARD3Q8TEW0 1356 aa23.19■■□□□ 1.3
SNX17-209ENST00000494893 KCNQ2O43526 872 aa23.19■■□□□ 1.3
SNX17-209ENST00000494893 PPP2R1AP30153 589 aa23.19■■□□□ 1.3
SNX17-209ENST00000494893 BAG6P46379 1132 aa23.19■■□□□ 1.3
SNX17-209ENST00000494893 APBA3O96018 575 aa23.18■■□□□ 1.3
SNX17-209ENST00000494893 BCL11BQ9C0K0 894 aaPredicted RBP23.18■■□□□ 1.3
SNX17-209ENST00000494893 NHSQ6T4R5 1651 aa23.17■■□□□ 1.3
SNX17-209ENST00000494893 CYP27B1O15528 508 aa23.17■■□□□ 1.3
SNX17-209ENST00000494893 ACSBG1Q96GR2 724 aa23.17■■□□□ 1.3
SNX17-209ENST00000494893 CAMKK2Q96RR4 588 aa23.17■■□□□ 1.3
SNX17-209ENST00000494893 KDRP35968 1356 aa23.16■■□□□ 1.3
SNX17-209ENST00000494893 EZH2Q15910 746 aaKnown RBP23.15■■□□□ 1.3
SNX17-209ENST00000494893 DIAPH1O60610 1272 aaKnown RBP23.14■■□□□ 1.29
SNX17-209ENST00000494893 PCDH11XQ9BZA7 1347 aa23.13■■□□□ 1.29
SNX17-209ENST00000494893 PCDH11YQ9BZA8 1340 aa23.13■■□□□ 1.29
SNX17-209ENST00000494893 SULT6B1Q6IMI4 303 aa23.13■■□□□ 1.29
SNX17-209ENST00000494893 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.12■■□□□ 1.295e-9■□□□□ 8.6
SNX17-209ENST00000494893 PLEKHG2Q9H7P9 1386 aa23.12■■□□□ 1.29
SNX17-209ENST00000494893 DOT1LQ8TEK3 1739 aa23.11■■□□□ 1.29
SNX17-209ENST00000494893 RREB1Q92766 1687 aa23.09■■□□□ 1.29
SNX17-209ENST00000494893 TOGARAM1Q9Y4F4 1720 aa23.09■■□□□ 1.29
SNX17-209ENST00000494893 SPG7Q9UQ90 795 aa23.09■■□□□ 1.29
SNX17-209ENST00000494893 PLSCR1O15162 318 aa23.08■■□□□ 1.29
SNX17-209ENST00000494893 HMOX1P09601 288 aa23.08■■□□□ 1.29
SNX17-209ENST00000494893 PRIM1P49642 420 aaKnown RBP23.08■■□□□ 1.29
SNX17-209ENST00000494893 NKX1-1Q15270 411 aaPredicted RBP23.08■■□□□ 1.29
SNX17-209ENST00000494893 PROM2Q8N271 834 aa23.08■■□□□ 1.29
SNX17-209ENST00000494893 RGPD3A6NKT7 1758 aaPredicted RBP23.07■■□□□ 1.28
SNX17-209ENST00000494893 RGPD4Q7Z3J3 1758 aa23.07■■□□□ 1.28
SNX17-209ENST00000494893 PHKG2P15735 406 aa23.07■■□□□ 1.28
SNX17-209ENST00000494893 BTAF1O14981 1849 aa23.06■■□□□ 1.28
SNX17-209ENST00000494893 NUP188Q5SRE5 1749 aa23.05■■□□□ 1.28
SNX17-209ENST00000494893 CFAP53Q96M91 514 aa23.04■■□□□ 1.28
SNX17-209ENST00000494893 U2SURPO15042 1029 aaKnown RBP23.03■■□□□ 1.28
SNX17-209ENST00000494893 RALBP1Q15311 655 aa23.03■■□□□ 1.28
SNX17-209ENST00000494893 PLEKHO1Q53GL0 409 aaPredicted RBP23.03■■□□□ 1.28
SNX17-209ENST00000494893 IFNL2Q8IZJ0 200 aa23.03■■□□□ 1.28
SNX17-209ENST00000494893 ZNF530Q6P9A1 599 aaPredicted RBP23.02■■□□□ 1.28
SNX17-209ENST00000494893 SYTL4Q96C24 671 aaPredicted RBP23.02■■□□□ 1.28
SNX17-209ENST00000494893 AMOTQ4VCS5 1084 aa23.01■■□□□ 1.27
SNX17-209ENST00000494893 KDM6AO15550 1401 aaPredicted RBP23■■□□□ 1.27
SNX17-209ENST00000494893 TXNRD1Q16881 649 aa23■■□□□ 1.27
SNX17-209ENST00000494893 RSPH6AQ9H0K4 717 aa22.98■■□□□ 1.27
SNX17-209ENST00000494893 PRKRIP1Q9H875 184 aaPredicted RBP22.98■■□□□ 1.27
SNX17-209ENST00000494893 MTHFSDQ2M296 383 aaKnown RBP22.97■■□□□ 1.27
SNX17-209ENST00000494893 MYBBP1AQ9BQG0 1328 aaKnown RBP22.97■■□□□ 1.27
SNX17-209ENST00000494893 ITGB4P16144 1822 aa22.96■■□□□ 1.27
SNX17-209ENST00000494893 MPRIPQ6WCQ1 1025 aa22.96■■□□□ 1.27
SNX17-209ENST00000494893 PIGBQ92521 554 aa22.96■■□□□ 1.27
SNX17-209ENST00000494893 ANO8Q9HCE9 1232 aaPredicted RBP22.96■■□□□ 1.27
SNX17-209ENST00000494893 PSDA5PKW4 1024 aaPredicted RBP22.95■■□□□ 1.26
SNX17-209ENST00000494893 LRRC4BQ9NT99 713 aa22.95■■□□□ 1.26
SNX17-209ENST00000494893 NUDCQ9Y266 331 aa22.95■■□□□ 1.26
SNX17-209ENST00000494893 KAT6BQ8WYB5 2073 aa22.94■■□□□ 1.26
SNX17-209ENST00000494893 U2AF1L5P0DN76 240 aaPredicted RBP22.94■■□□□ 1.26
SNX17-209ENST00000494893 U2AF1Q01081 240 aaKnown RBP eCLIP22.94■■□□□ 1.26
SNX17-209ENST00000494893 DCAF5Q96JK2 942 aa22.94■■□□□ 1.26
SNX17-209ENST00000494893 PHACTR3Q96KR7 559 aa22.94■■□□□ 1.26
SNX17-209ENST00000494893 LY75O60449 1722 aa22.94■■□□□ 1.26
SNX17-209ENST00000494893 PAPPAQ13219 1627 aa22.93■■□□□ 1.26
SNX17-209ENST00000494893 PRKAR2BP31323 418 aa22.93■■□□□ 1.26
SNX17-209ENST00000494893 R3HDM1Q15032 1099 aaKnown RBP22.93■■□□□ 1.26
SNX17-209ENST00000494893 HSP90AB1P08238 724 aaKnown RBP22.92■■□□□ 1.26
SNX17-209ENST00000494893 KCNQ4P56696 695 aa22.92■■□□□ 1.26
SNX17-209ENST00000494893 AKAP4Q5JQC9 854 aa22.92■■□□□ 1.26
SNX17-209ENST00000494893 C1orf141Q5JVX7 400 aa22.92■■□□□ 1.26
SNX17-209ENST00000494893 DIEXFQ68CQ4 756 aaKnown RBP22.91■■□□□ 1.26
SNX17-209ENST00000494893 ERVV-2B6SEH9 535 aa22.9■■□□□ 1.26
SNX17-209ENST00000494893 LGR6Q9HBX8 967 aa22.9■■□□□ 1.26
SNX17-209ENST00000494893 TMOD3Q9NYL9 352 aa22.9■■□□□ 1.26
SNX17-209ENST00000494893 ADAMTS7Q9UKP4 1686 aa22.9■■□□□ 1.26
SNX17-209ENST00000494893 PALLDQ8WX93 1383 aa22.89■■□□□ 1.26
SNX17-209ENST00000494893 FCHSD2O94868 740 aa22.89■■□□□ 1.25
SNX17-209ENST00000494893 ASAP1Q9ULH1 1129 aa22.88■■□□□ 1.25
SNX17-209ENST00000494893 SCN11AQ9UI33 1791 aa22.87■■□□□ 1.25
SNX17-209ENST00000494893 SLC27A3Q5K4L6 730 aa22.87■■□□□ 1.25
SNX17-209ENST00000494893 NBPF14Q5TI25 921 aa22.87■■□□□ 1.25
SNX17-209ENST00000494893 ATG3Q9NT62 314 aa22.87■■□□□ 1.25
SNX17-209ENST00000494893 RNMTO43148 476 aaKnown RBP22.86■■□□□ 1.25
SNX17-209ENST00000494893 ZNF827Q17R98 1081 aa22.86■■□□□ 1.25
SNX17-209ENST00000494893 MRC1P22897 1456 aa22.85■■□□□ 1.25
SNX17-209ENST00000494893 GAS2L2Q8NHY3 880 aa22.85■■□□□ 1.25
SNX17-209ENST00000494893 PLEKHF1Q96S99 279 aa22.85■■□□□ 1.25
SNX17-209ENST00000494893 CABP4P57796 275 aa22.84■■□□□ 1.25
SNX17-209ENST00000494893 NFATC2IPQ8NCF5 419 aa22.84■■□□□ 1.25
SNX17-209ENST00000494893 CCNL1Q9UK58 526 aaPredicted RBP22.84■■□□□ 1.25
SNX17-209ENST00000494893 MAP3K5Q99683 1374 aa22.84■■□□□ 1.25
SNX17-209ENST00000494893 SLC15A2Q16348 729 aa22.83■■□□□ 1.25
SNX17-209ENST00000494893 SMARCC1Q92922 1105 aaPredicted RBP22.83■■□□□ 1.25
SNX17-209ENST00000494893 IL17REQ8NFR9 667 aa22.82■■□□□ 1.24
SNX17-209ENST00000494893 AKT1S1Q96B36 256 aa22.82■■□□□ 1.24
SNX17-209ENST00000494893 PDGFDQ9GZP0 370 aaPredicted RBP22.82■■□□□ 1.24
SNX17-209ENST00000494893 GNAT3A8MTJ3 354 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms