RNA–Protein interactions for RNA: ENST00000494655.5

CCDC12-207, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-207ENST00000494655 DDX54Q8TDD1 881 aaKnown RBP28.16■■■□□ 2.1
CCDC12-207ENST00000494655 NCAPD2Q15021 1401 aa28.16■■■□□ 2.1
CCDC12-207ENST00000494655 EN1Q05925 392 aaPredicted RBP28.15■■■□□ 2.1
CCDC12-207ENST00000494655 PKD1L3Q7Z443 1732 aa28.15■■■□□ 2.1
CCDC12-207ENST00000494655 BCL11BQ9C0K0 894 aaPredicted RBP28.14■■■□□ 2.1
CCDC12-207ENST00000494655 PCDH11XQ9BZA7 1347 aa28.13■■■□□ 2.09
CCDC12-207ENST00000494655 PCDH11YQ9BZA8 1340 aa28.13■■■□□ 2.09
CCDC12-207ENST00000494655 EYA1Q99502 592 aa28.12■■■□□ 2.09
CCDC12-207ENST00000494655 RREB1Q92766 1687 aa28.12■■■□□ 2.09
CCDC12-207ENST00000494655 DOT1LQ8TEK3 1739 aa28.12■■■□□ 2.09
CCDC12-207ENST00000494655 IGSF1Q8N6C5 1336 aa28.09■■■□□ 2.09
CCDC12-207ENST00000494655 PLEKHG2Q9H7P9 1386 aa28.09■■■□□ 2.09
CCDC12-207ENST00000494655 KAT6BQ8WYB5 2073 aa28.08■■■□□ 2.09
CCDC12-207ENST00000494655 MTHFSP49914 203 aa28.08■■■□□ 2.09
CCDC12-207ENST00000494655 SPG7Q9UQ90 795 aa28.08■■■□□ 2.09
CCDC12-207ENST00000494655 EZH2Q15910 746 aaKnown RBP28.07■■■□□ 2.08
CCDC12-207ENST00000494655 ACSBG1Q96GR2 724 aa28.07■■■□□ 2.08
CCDC12-207ENST00000494655 NUP188Q5SRE5 1749 aa28.06■■■□□ 2.08
CCDC12-207ENST00000494655 BTAF1O14981 1849 aa28.06■■■□□ 2.08
CCDC12-207ENST00000494655 CAMKK2Q96RR4 588 aa28.06■■■□□ 2.08
CCDC12-207ENST00000494655 PLSCR1O15162 318 aa28.03■■■□□ 2.08
CCDC12-207ENST00000494655 SYTL4Q96C24 671 aaPredicted RBP28.02■■■□□ 2.08
CCDC12-207ENST00000494655 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.02■■■□□ 2.08
CCDC12-207ENST00000494655 CFAP53Q96M91 514 aa28.01■■■□□ 2.07
CCDC12-207ENST00000494655 KCNQ2O43526 872 aa28■■■□□ 2.07
CCDC12-207ENST00000494655 DIAPH1O60610 1272 aaKnown RBP28■■■□□ 2.07
CCDC12-207ENST00000494655 IL13P35225 146 aa27.99■■■□□ 2.07
CCDC12-207ENST00000494655 PTF1AQ7RTS3 328 aa27.98■■■□□ 2.07
CCDC12-207ENST00000494655 NBPF14Q5TI25 921 aa27.97■■■□□ 2.07
CCDC12-207ENST00000494655 SULT6B1Q6IMI4 303 aa27.96■■■□□ 2.07
CCDC12-207ENST00000494655 KDRP35968 1356 aa27.96■■■□□ 2.07
CCDC12-207ENST00000494655 PLEKHO1Q53GL0 409 aaPredicted RBP27.95■■■□□ 2.06
CCDC12-207ENST00000494655 COL3A1P02461 1466 aaPredicted RBP27.95■■■□□ 2.06
CCDC12-207ENST00000494655 CYP27B1O15528 508 aa27.94■■■□□ 2.06
CCDC12-207ENST00000494655 PRIM1P49642 420 aaKnown RBP27.94■■■□□ 2.06
CCDC12-207ENST00000494655 AMOTQ4VCS5 1084 aa27.94■■■□□ 2.06
CCDC12-207ENST00000494655 IFNL2Q8IZJ0 200 aa27.94■■■□□ 2.06
CCDC12-207ENST00000494655 TOGARAM1Q9Y4F4 1720 aa27.93■■■□□ 2.06
CCDC12-207ENST00000494655 AEBP1Q8IUX7 1158 aa27.93■■■□□ 2.06
CCDC12-207ENST00000494655 PPP2R1AP30153 589 aa27.92■■■□□ 2.06
CCDC12-207ENST00000494655 DDX10Q13206 875 aaKnown RBP27.92■■■□□ 2.06
CCDC12-207ENST00000494655 ITGB4P16144 1822 aa27.91■■■□□ 2.06
CCDC12-207ENST00000494655 TXNRD1Q16881 649 aa27.9■■■□□ 2.06
CCDC12-207ENST00000494655 PSDA5PKW4 1024 aaPredicted RBP27.89■■■□□ 2.06
CCDC12-207ENST00000494655 U2SURPO15042 1029 aaKnown RBP27.89■■■□□ 2.06
CCDC12-207ENST00000494655 HSP90AB1P08238 724 aaKnown RBP27.89■■■□□ 2.06
CCDC12-207ENST00000494655 PHKG2P15735 406 aa27.89■■■□□ 2.06
CCDC12-207ENST00000494655 C1orf141Q5JVX7 400 aa27.89■■■□□ 2.06
CCDC12-207ENST00000494655 R3HDM1Q15032 1099 aaKnown RBP27.88■■■□□ 2.05
CCDC12-207ENST00000494655 ZNF530Q6P9A1 599 aaPredicted RBP27.88■■■□□ 2.05
CCDC12-207ENST00000494655 NUDCQ9Y266 331 aa27.88■■■□□ 2.05
CCDC12-207ENST00000494655 LY75O60449 1722 aa27.87■■■□□ 2.05
CCDC12-207ENST00000494655 HMOX1P09601 288 aa27.87■■■□□ 2.05
CCDC12-207ENST00000494655 NKX1-1Q15270 411 aaPredicted RBP27.87■■■□□ 2.05
CCDC12-207ENST00000494655 MPRIPQ6WCQ1 1025 aa27.85■■■□□ 2.05
CCDC12-207ENST00000494655 RALBP1Q15311 655 aa27.83■■■□□ 2.05
CCDC12-207ENST00000494655 SLC27A3Q5K4L6 730 aa27.83■■■□□ 2.05
CCDC12-207ENST00000494655 TMOD3Q9NYL9 352 aa27.83■■■□□ 2.05
CCDC12-207ENST00000494655 DCAF5Q96JK2 942 aa27.82■■■□□ 2.04
CCDC12-207ENST00000494655 STK32BQ9NY57 414 aa27.82■■■□□ 2.04
CCDC12-207ENST00000494655 PAPPAQ13219 1627 aa27.81■■■□□ 2.04
CCDC12-207ENST00000494655 PROM2Q8N271 834 aa27.8■■■□□ 2.04
CCDC12-207ENST00000494655 HMGB2P26583 209 aaKnown RBP27.79■■■□□ 2.04
CCDC12-207ENST00000494655 SMARCC1Q92922 1105 aaPredicted RBP27.79■■■□□ 2.04
CCDC12-207ENST00000494655 PALLDQ8WX93 1383 aa27.78■■■□□ 2.04
CCDC12-207ENST00000494655 LRP5O75197 1615 aa27.78■■■□□ 2.04
CCDC12-207ENST00000494655 CCNL1Q9UK58 526 aaPredicted RBP27.77■■■□□ 2.04
CCDC12-207ENST00000494655 SCN11AQ9UI33 1791 aa27.77■■■□□ 2.04
CCDC12-207ENST00000494655 ERVV-2B6SEH9 535 aa27.76■■■□□ 2.03
CCDC12-207ENST00000494655 U2AF1L5P0DN76 240 aaPredicted RBP27.76■■■□□ 2.03
CCDC12-207ENST00000494655 U2AF1Q01081 240 aaKnown RBP eCLIP27.76■■■□□ 2.03
CCDC12-207ENST00000494655 AKAP4Q5JQC9 854 aa27.76■■■□□ 2.03
CCDC12-207ENST00000494655 ANO8Q9HCE9 1232 aaPredicted RBP27.76■■■□□ 2.03
CCDC12-207ENST00000494655 KDM6AO15550 1401 aaPredicted RBP27.75■■■□□ 2.03
CCDC12-207ENST00000494655 C5P01031 1676 aa27.75■■■□□ 2.03
CCDC12-207ENST00000494655 VIRMAQ69YN4 1812 aaKnown RBP27.74■■■□□ 2.03
CCDC12-207ENST00000494655 PIGBQ92521 554 aa27.74■■■□□ 2.03
CCDC12-207ENST00000494655 CABP4P57796 275 aa27.73■■■□□ 2.03
CCDC12-207ENST00000494655 SLC15A2Q16348 729 aa27.73■■■□□ 2.03
CCDC12-207ENST00000494655 MYBBP1AQ9BQG0 1328 aaKnown RBP27.72■■■□□ 2.03
CCDC12-207ENST00000494655 ZNF316A6NFI3 1004 aaPredicted RBP27.72■■■□□ 2.03
CCDC12-207ENST00000494655 GAS2L2Q8NHY3 880 aa27.72■■■□□ 2.03
CCDC12-207ENST00000494655 LRRC4BQ9NT99 713 aa27.71■■■□□ 2.03
CCDC12-207ENST00000494655 CASZ1Q86V15 1759 aa27.71■■■□□ 2.03
CCDC12-207ENST00000494655 QSER1Q2KHR3 1735 aa27.7■■■□□ 2.03
CCDC12-207ENST00000494655 NEFMP07197 916 aa27.7■■■□□ 2.02
CCDC12-207ENST00000494655 PRKAR2BP31323 418 aa27.7■■■□□ 2.02
CCDC12-207ENST00000494655 MTHFSDQ2M296 383 aaKnown RBP27.7■■■□□ 2.02
CCDC12-207ENST00000494655 TAF1LQ8IZX4 1826 aa27.69■■■□□ 2.02
CCDC12-207ENST00000494655 RSPH6AQ9H0K4 717 aa27.68■■■□□ 2.02
CCDC12-207ENST00000494655 FCHSD2O94868 740 aa27.67■■■□□ 2.02
CCDC12-207ENST00000494655 MAP3K5Q99683 1374 aa27.67■■■□□ 2.02
CCDC12-207ENST00000494655 ADAMTS7Q9UKP4 1686 aa27.66■■■□□ 2.02
CCDC12-207ENST00000494655 MRC1P22897 1456 aa27.66■■■□□ 2.02
CCDC12-207ENST00000494655 KCNQ4P56696 695 aa27.65■■■□□ 2.02
CCDC12-207ENST00000494655 ZNF827Q17R98 1081 aa27.64■■■□□ 2.02
CCDC12-207ENST00000494655 TFCP2L1Q9NZI6 479 aa27.64■■■□□ 2.02
CCDC12-207ENST00000494655 ASAP1Q9ULH1 1129 aa27.64■■■□□ 2.02
CCDC12-207ENST00000494655 ZNF831Q5JPB2 1677 aa27.63■■■□□ 2.01
CCDC12-207ENST00000494655 TUBGCP6Q96RT7 1819 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms