RNA–Protein interactions for RNA: ENST00000494467.1

ABCA1-204, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 3

Gene ABCA1, Length 807 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-204ENST00000494467 VPS72Q15906 364 aa12.18□□□□□ -0.46
ABCA1-204ENST00000494467 BARGINQ6ZT62 677 aa12.18□□□□□ -0.46
ABCA1-204ENST00000494467 WDR63Q8IWG1 891 aa12.18□□□□□ -0.46
ABCA1-204ENST00000494467 CCDC146Q8IYE0 955 aa12.18□□□□□ -0.46
ABCA1-204ENST00000494467 CDCA7Q9BWT1 371 aaPredicted RBP12.18□□□□□ -0.46
ABCA1-204ENST00000494467 NLRP2Q9NX02 1062 aa12.18□□□□□ -0.46
ABCA1-204ENST00000494467 TRIM35Q9UPQ4 493 aa12.18□□□□□ -0.46
ABCA1-204ENST00000494467 THSD7AQ9UPZ6 1657 aa12.17□□□□□ -0.46
ABCA1-204ENST00000494467 NUTM2BA6NNL0 878 aaPredicted RBP12.17□□□□□ -0.46
ABCA1-204ENST00000494467 NUTM2EB1AL46 878 aaPredicted RBP12.17□□□□□ -0.46
ABCA1-204ENST00000494467 PLEKHG5O94827 1062 aa12.17□□□□□ -0.46
ABCA1-204ENST00000494467 LMOD3Q0VAK6 560 aa12.17□□□□□ -0.46
ABCA1-204ENST00000494467 PLEKHO1Q53GL0 409 aaPredicted RBP12.17□□□□□ -0.46
ABCA1-204ENST00000494467 TOM1L2Q6ZVM7 507 aa12.17□□□□□ -0.46
ABCA1-204ENST00000494467 NUTM2AQ8IVF1 878 aaPredicted RBP12.17□□□□□ -0.46
ABCA1-204ENST00000494467 WWC1Q8IX03 1113 aa12.17□□□□□ -0.46
ABCA1-204ENST00000494467 TRMT2AQ8IZ69 625 aaKnown RBP12.17□□□□□ -0.46
ABCA1-204ENST00000494467 ATRNO75882 1429 aa12.17□□□□□ -0.46
ABCA1-204ENST00000494467 CSB-PGBD3P0DP91 1061 aa12.16□□□□□ -0.46
ABCA1-204ENST00000494467 MTHFSDQ2M296 383 aaKnown RBP12.16□□□□□ -0.46
ABCA1-204ENST00000494467 RAPGEF4Q8WZA2 1011 aa12.16□□□□□ -0.46
ABCA1-204ENST00000494467 CEMIPQ8WUJ3 1361 aa12.16□□□□□ -0.46
ABCA1-204ENST00000494467 IL2RBP14784 551 aa12.15□□□□□ -0.46
ABCA1-204ENST00000494467 TATP17735 454 aaPredicted RBP12.15□□□□□ -0.46
ABCA1-204ENST00000494467 RIPK4P57078 832 aa12.15□□□□□ -0.46
ABCA1-204ENST00000494467 NGLY1Q96IV0 654 aa12.15□□□□□ -0.46
ABCA1-204ENST00000494467 MAP3K5Q99683 1374 aa12.15□□□□□ -0.46
ABCA1-204ENST00000494467 MRC1P22897 1456 aa12.14□□□□□ -0.47
ABCA1-204ENST00000494467 GLI3P10071 1580 aa12.14□□□□□ -0.47
ABCA1-204ENST00000494467 ONECUT3O60422 494 aaPredicted RBP12.14□□□□□ -0.47
ABCA1-204ENST00000494467 CALD1Q05682 793 aaKnown RBP12.14□□□□□ -0.47
ABCA1-204ENST00000494467 NKX1-1Q15270 411 aaPredicted RBP12.14□□□□□ -0.47
ABCA1-204ENST00000494467 AKAP4Q5JQC9 854 aa12.14□□□□□ -0.47
ABCA1-204ENST00000494467 USHBP1Q8N6Y0 703 aa12.14□□□□□ -0.47
ABCA1-204ENST00000494467 STRN4Q9NRL3 753 aa12.14□□□□□ -0.47
ABCA1-204ENST00000494467 SPG7Q9UQ90 795 aa12.14□□□□□ -0.47
ABCA1-204ENST00000494467 C8orf37Q96NL8 207 aa12.13□□□□□ -0.47
ABCA1-204ENST00000494467 BABAM1Q9NWV8 329 aa12.13□□□□□ -0.47
ABCA1-204ENST00000494467 TNS2Q63HR2 1409 aa12.12□□□□□ -0.47
ABCA1-204ENST00000494467 GNAT3A8MTJ3 354 aa12.12□□□□□ -0.47
ABCA1-204ENST00000494467 ZNF853P0CG23 659 aa12.12□□□□□ -0.47
ABCA1-204ENST00000494467 GOLGA2Q08379 1002 aa12.12□□□□□ -0.47
ABCA1-204ENST00000494467 SLFN5Q08AF3 891 aa12.12□□□□□ -0.47
ABCA1-204ENST00000494467 USP21Q9UK80 565 aa12.12□□□□□ -0.47
ABCA1-204ENST00000494467 KDM3BQ7LBC6 1761 aa12.12□□□□□ -0.47
ABCA1-204ENST00000494467 AFF2P51816 1311 aa12.11□□□□□ -0.47
ABCA1-204ENST00000494467 E9PSI1 815 aa12.11□□□□□ -0.47
ABCA1-204ENST00000494467 ZCRB1Q8TBF4 217 aaKnown RBP12.11□□□□□ -0.47
ABCA1-204ENST00000494467 TRPC5Q9UL62 973 aaPredicted RBP12.11□□□□□ -0.47
ABCA1-204ENST00000494467 ITGB4P16144 1822 aa12.11□□□□□ -0.47
ABCA1-204ENST00000494467 BCL9O00512 1426 aa12.11□□□□□ -0.47
ABCA1-204ENST00000494467 PCDH11XQ9BZA7 1347 aa12.11□□□□□ -0.47
ABCA1-204ENST00000494467 PCDH11YQ9BZA8 1340 aa12.11□□□□□ -0.47
ABCA1-204ENST00000494467 CACNA1FO60840 1977 aa12.1□□□□□ -0.47
ABCA1-204ENST00000494467 HSP90AB1P08238 724 aaKnown RBP12.1□□□□□ -0.47
ABCA1-204ENST00000494467 PHKG2P15735 406 aa12.1□□□□□ -0.47
ABCA1-204ENST00000494467 MEX3CQ5U5Q3 659 aaKnown RBP12.1□□□□□ -0.47
ABCA1-204ENST00000494467 ZNF530Q6P9A1 599 aaPredicted RBP12.1□□□□□ -0.47
ABCA1-204ENST00000494467 IFNL2Q8IZJ0 200 aa12.1□□□□□ -0.47
ABCA1-204ENST00000494467 YTHDC1Q96MU7 727 aaKnown RBP12.1□□□□□ -0.47
ABCA1-204ENST00000494467 RRP7AQ9Y3A4 280 aaKnown RBP12.1□□□□□ -0.47
ABCA1-204ENST00000494467 TOGARAM1Q9Y4F4 1720 aa12.09□□□□□ -0.47
ABCA1-204ENST00000494467 CYP27B1O15528 508 aa12.09□□□□□ -0.47
ABCA1-204ENST00000494467 DUSP27Q5VZP5 1158 aa12.09□□□□□ -0.47
ABCA1-204ENST00000494467 IL17REQ8NFR9 667 aa12.09□□□□□ -0.47
ABCA1-204ENST00000494467 GJD4Q96KN9 370 aaPredicted RBP12.09□□□□□ -0.47
ABCA1-204ENST00000494467 IFT57Q9NWB7 429 aa12.09□□□□□ -0.47
ABCA1-204ENST00000494467 KDM6AO15550 1401 aaPredicted RBP12.09□□□□□ -0.47
ABCA1-204ENST00000494467 PAPPAQ13219 1627 aa12.08□□□□□ -0.48
ABCA1-204ENST00000494467 C1orf141Q5JVX7 400 aa12.08□□□□□ -0.48
ABCA1-204ENST00000494467 ZNF772Q68DY9 489 aaPredicted RBP12.08□□□□□ -0.48
ABCA1-204ENST00000494467 DCAF5Q96JK2 942 aa12.08□□□□□ -0.48
ABCA1-204ENST00000494467 CFAP44Q96MT7 982 aa12.08□□□□□ -0.48
ABCA1-204ENST00000494467 UBR2Q8IWV8 1755 aa12.07□□□□□ -0.48
ABCA1-204ENST00000494467 SBF2Q86WG5 1849 aa12.07□□□□□ -0.48
ABCA1-204ENST00000494467 CHL1O00533 1208 aa12.07□□□□□ -0.48
ABCA1-204ENST00000494467 RNMTO43148 476 aaKnown RBP12.07□□□□□ -0.48
ABCA1-204ENST00000494467 CENPBP07199 599 aaPredicted RBP12.07□□□□□ -0.48
ABCA1-204ENST00000494467 GNAI1P63096 354 aa12.07□□□□□ -0.48
ABCA1-204ENST00000494467 NEUROD2Q15784 382 aa12.07□□□□□ -0.48
ABCA1-204ENST00000494467 RTF1Q92541 710 aaKnown RBP12.07□□□□□ -0.48
ABCA1-204ENST00000494467 MYH16Q9H6N6 1097 aa12.07□□□□□ -0.48
ABCA1-204ENST00000494467 BRWD3Q6RI45 1802 aa12.07□□□□□ -0.48
ABCA1-204ENST00000494467 ERVV-2B6SEH9 535 aa12.06□□□□□ -0.48
ABCA1-204ENST00000494467 EXOC5O00471 708 aa12.06□□□□□ -0.48
ABCA1-204ENST00000494467 CT47B1P0C2W7 299 aaPredicted RBP12.06□□□□□ -0.48
ABCA1-204ENST00000494467 SPINK5Q9NQ38 1064 aaPredicted RBP12.06□□□□□ -0.48
ABCA1-204ENST00000494467 SOS1Q07889 1333 aaPredicted RBP12.06□□□□□ -0.48
ABCA1-204ENST00000494467 CDCA7LQ96GN5 454 aa12.05□□□□□ -0.48
ABCA1-204ENST00000494467 ZNF831Q5JPB2 1677 aa12.05□□□□□ -0.48
ABCA1-204ENST00000494467 DOT1LQ8TEK3 1739 aa12.05□□□□□ -0.48
ABCA1-204ENST00000494467 CICQ96RK0 1608 aaPredicted RBP12.04□□□□□ -0.48
ABCA1-204ENST00000494467 TAF7Q15545 349 aaPredicted RBP12.04□□□□□ -0.48
ABCA1-204ENST00000494467 DDB1Q16531 1140 aa12.04□□□□□ -0.48
ABCA1-204ENST00000494467 MCM10Q7L590 875 aa12.04□□□□□ -0.48
ABCA1-204ENST00000494467 QTRT2Q9H974 415 aaKnown RBP12.04□□□□□ -0.48
ABCA1-204ENST00000494467 LGR6Q9HBX8 967 aa12.04□□□□□ -0.48
ABCA1-204ENST00000494467 SALL2Q9Y467 1007 aaPredicted RBP12.04□□□□□ -0.48
ABCA1-204ENST00000494467 HEG1Q9ULI3 1381 aa12.04□□□□□ -0.48
ABCA1-204ENST00000494467 RBM6P78332 1123 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms