RNA–Protein interactions for RNA: ENST00000494340.1

LINC02008-202, Transcript of long intergenic non-protein coding RNA 2008, humanhuman

TSL 2

Gene LINC02008, Length 524 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02008-202ENST00000494340 LY75O60449 1722 aa13.44□□□□□ -0.26
LINC02008-202ENST00000494340 NBPF6Q5VWK0 638 aa13.44□□□□□ -0.26
LINC02008-202ENST00000494340 DDX54Q8TDD1 881 aaKnown RBP13.44□□□□□ -0.26
LINC02008-202ENST00000494340 NBPF4Q96M43 638 aa13.44□□□□□ -0.26
LINC02008-202ENST00000494340 MTFR1LQ9H019 292 aa13.44□□□□□ -0.26
LINC02008-202ENST00000494340 NCAPD2Q15021 1401 aa13.44□□□□□ -0.26
LINC02008-202ENST00000494340 TATP17735 454 aaPredicted RBP13.43□□□□□ -0.26
LINC02008-202ENST00000494340 HMGB2P26583 209 aaKnown RBP13.43□□□□□ -0.26
LINC02008-202ENST00000494340 PTGER2P43116 358 aa13.43□□□□□ -0.26
LINC02008-202ENST00000494340 RAPGEF4Q8WZA2 1011 aa13.43□□□□□ -0.26
LINC02008-202ENST00000494340 NSD2O96028 1365 aa13.43□□□□□ -0.26
LINC02008-202ENST00000494340 DCAF8L1A6NGE4 600 aa13.42□□□□□ -0.26
LINC02008-202ENST00000494340 HSP90AB2PQ58FF8 381 aa13.42□□□□□ -0.26
LINC02008-202ENST00000494340 PLEKHG2Q9H7P9 1386 aa13.42□□□□□ -0.26
LINC02008-202ENST00000494340 COL24A1Q17RW2 1714 aa13.42□□□□□ -0.26
LINC02008-202ENST00000494340 PCDH11XQ9BZA7 1347 aa13.41□□□□□ -0.26
LINC02008-202ENST00000494340 PCDH11YQ9BZA8 1340 aa13.41□□□□□ -0.26
LINC02008-202ENST00000494340 ZBTB7AO95365 584 aa13.41□□□□□ -0.26
LINC02008-202ENST00000494340 SLC16A10Q8TF71 515 aa13.41□□□□□ -0.26
LINC02008-202ENST00000494340 AKT1S1Q96B36 256 aa13.41□□□□□ -0.26
LINC02008-202ENST00000494340 SGIP1Q9BQI5 828 aa13.41□□□□□ -0.26
LINC02008-202ENST00000494340 PCGF6Q9BYE7 350 aa13.41□□□□□ -0.26
LINC02008-202ENST00000494340 PDGFDQ9GZP0 370 aaPredicted RBP13.41□□□□□ -0.26
LINC02008-202ENST00000494340 LRRC4BQ9NT99 713 aa13.41□□□□□ -0.26
LINC02008-202ENST00000494340 PKD1L3Q7Z443 1732 aa13.41□□□□□ -0.26
LINC02008-202ENST00000494340 WASHC2AQ641Q2 1341 aa13.4□□□□□ -0.26
LINC02008-202ENST00000494340 PRIM1P49642 420 aaKnown RBP13.4□□□□□ -0.26
LINC02008-202ENST00000494340 EIF4G2P78344 907 aaKnown RBP eCLIP13.4□□□□□ -0.26
LINC02008-202ENST00000494340 MAP2P11137 1827 aaKnown RBP13.4□□□□□ -0.26
LINC02008-202ENST00000494340 MAP3K5Q99683 1374 aa13.4□□□□□ -0.26
LINC02008-202ENST00000494340 ZNF827Q17R98 1081 aa13.39□□□□□ -0.27
LINC02008-202ENST00000494340 USHBP1Q8N6Y0 703 aa13.38□□□□□ -0.27
LINC02008-202ENST00000494340 SYTL4Q96C24 671 aaPredicted RBP13.38□□□□□ -0.27
LINC02008-202ENST00000494340 ATF5Q9Y2D1 282 aaPredicted RBP13.38□□□□□ -0.27
LINC02008-202ENST00000494340 EMILIN1Q9Y6C2 1016 aa13.38□□□□□ -0.27
LINC02008-202ENST00000494340 TUBGCP6Q96RT7 1819 aa13.37□□□□□ -0.27
LINC02008-202ENST00000494340 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.37□□□□□ -0.27
LINC02008-202ENST00000494340 PNPLA7Q6ZV29 1317 aa13.36□□□□□ -0.27
LINC02008-202ENST00000494340 ITGB4P16144 1822 aa13.35□□□□□ -0.27
LINC02008-202ENST00000494340 HSPA5P11021 654 aaKnown RBP13.35□□□□□ -0.27
LINC02008-202ENST00000494340 NKX1-1Q15270 411 aaPredicted RBP13.35□□□□□ -0.27
LINC02008-202ENST00000494340 ARXQ96QS3 562 aa13.35□□□□□ -0.27
LINC02008-202ENST00000494340 SYT17Q9BSW7 474 aa13.35□□□□□ -0.27
LINC02008-202ENST00000494340 POLKQ9UBT6 870 aa13.35□□□□□ -0.27
LINC02008-202ENST00000494340 CCNL1Q9UK58 526 aaPredicted RBP13.35□□□□□ -0.27
LINC02008-202ENST00000494340 TOGARAM1Q9Y4F4 1720 aa13.34□□□□□ -0.27
LINC02008-202ENST00000494340 CYP27B1O15528 508 aa13.34□□□□□ -0.27
LINC02008-202ENST00000494340 FHDC1Q9C0D6 1143 aaPredicted RBP13.34□□□□□ -0.27
LINC02008-202ENST00000494340 TFCP2L1Q9NZI6 479 aa13.34□□□□□ -0.27
LINC02008-202ENST00000494340 SPG7Q9UQ90 795 aa13.34□□□□□ -0.27
LINC02008-202ENST00000494340 TAF1LQ8IZX4 1826 aa13.34□□□□□ -0.27
LINC02008-202ENST00000494340 C5P01031 1676 aa13.34□□□□□ -0.27
LINC02008-202ENST00000494340 YY1P25490 414 aa13.33□□□□□ -0.28
LINC02008-202ENST00000494340 CCER1Q8TC90 406 aaPredicted RBP13.33□□□□□ -0.28
LINC02008-202ENST00000494340 SMARCC1Q92922 1105 aaPredicted RBP13.33□□□□□ -0.28
LINC02008-202ENST00000494340 EYA1Q99502 592 aa13.33□□□□□ -0.28
LINC02008-202ENST00000494340 PPM1GO15355 546 aaPredicted RBP13.32□□□□□ -0.28
LINC02008-202ENST00000494340 POLD1P28340 1107 aa13.32□□□□□ -0.28
LINC02008-202ENST00000494340 PALLDQ8WX93 1383 aa13.32□□□□□ -0.28
LINC02008-202ENST00000494340 FLAD1Q8NFF5 587 aa13.31□□□□□ -0.28
LINC02008-202ENST00000494340 PANK3Q9H999 370 aa13.31□□□□□ -0.28
LINC02008-202ENST00000494340 EIF4A2Q14240 407 aaKnown RBP13.3□□□□□ -0.28
LINC02008-202ENST00000494340 IFNL2Q8IZJ0 200 aa13.3□□□□□ -0.28
LINC02008-202ENST00000494340 POLR3GLQ9BT43 218 aa13.3□□□□□ -0.28
LINC02008-202ENST00000494340 CHD4Q14839 1912 aa13.3□□□□□ -0.28
LINC02008-202ENST00000494340 IGSF1Q8N6C5 1336 aa13.3□□□□□ -0.28
LINC02008-202ENST00000494340 MPRIPQ6WCQ1 1025 aa13.29□□□□□ -0.28
LINC02008-202ENST00000494340 UTRNP46939 3433 aa13.29□□□□□ -0.28
LINC02008-202ENST00000494340 C4BP0C0L5 1744 aa13.28□□□□□ -0.28
LINC02008-202ENST00000494340 PHKG2P15735 406 aa13.28□□□□□ -0.28
LINC02008-202ENST00000494340 KCNQ4P56696 695 aa13.28□□□□□ -0.28
LINC02008-202ENST00000494340 PIGBQ92521 554 aa13.27□□□□□ -0.29
LINC02008-202ENST00000494340 ZNF831Q5JPB2 1677 aa13.27□□□□□ -0.29
LINC02008-202ENST00000494340 HSP90AB1P08238 724 aaKnown RBP13.26□□□□□ -0.29
LINC02008-202ENST00000494340 UBR3Q6ZT12 1888 aa13.26□□□□□ -0.29
LINC02008-202ENST00000494340 COL23A1Q86Y22 540 aaPredicted RBP13.26□□□□□ -0.29
LINC02008-202ENST00000494340 TMOD3Q9NYL9 352 aa13.26□□□□□ -0.29
LINC02008-202ENST00000494340 TNNT2P45379 298 aaPredicted RBP13.25□□□□□ -0.29
LINC02008-202ENST00000494340 AMOTQ4VCS5 1084 aa13.25□□□□□ -0.29
LINC02008-202ENST00000494340 MORC1Q86VD1 984 aa13.25□□□□□ -0.29
LINC02008-202ENST00000494340 KNSTRNQ9Y448 316 aa13.25□□□□□ -0.29
LINC02008-202ENST00000494340 LOC102724428A0A0B4J2F2 783 aa13.24□□□□□ -0.29
LINC02008-202ENST00000494340 ERVV-2B6SEH9 535 aa13.24□□□□□ -0.29
LINC02008-202ENST00000494340 SIK1P57059 783 aa13.24□□□□□ -0.29
LINC02008-202ENST00000494340 PLEKHO1Q53GL0 409 aaPredicted RBP13.24□□□□□ -0.29
LINC02008-202ENST00000494340 AK7Q96M32 723 aa13.24□□□□□ -0.29
LINC02008-202ENST00000494340 KDRP35968 1356 aa13.23□□□□□ -0.29
LINC02008-202ENST00000494340 SSFA2P28290 1259 aa13.23□□□□□ -0.29
LINC02008-202ENST00000494340 DCAF5Q96JK2 942 aa13.23□□□□□ -0.29
LINC02008-202ENST00000494340 MSH5O43196 834 aa13.22□□□□□ -0.29
LINC02008-202ENST00000494340 AMER1Q5JTC6 1135 aaPredicted RBP13.22□□□□□ -0.29
LINC02008-202ENST00000494340 KIF7Q2M1P5 1343 aa13.21□□□□□ -0.29
LINC02008-202ENST00000494340 GPR162Q16538 588 aa13.21□□□□□ -0.29
LINC02008-202ENST00000494340 CD2APQ9Y5K6 639 aa13.21□□□□□ -0.29
LINC02008-202ENST00000494340 ATG3Q9NT62 314 aa13.2□□□□□ -0.3
LINC02008-202ENST00000494340 ASAP1Q9ULH1 1129 aa13.2□□□□□ -0.3
LINC02008-202ENST00000494340 NPC1L1Q9UHC9 1359 aa13.2□□□□□ -0.3
LINC02008-202ENST00000494340 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.19□□□□□ -0.3
LINC02008-202ENST00000494340 GRIN3BO60391 1043 aa13.19□□□□□ -0.3
LINC02008-202ENST00000494340 IL13P35225 146 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms