RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 HSP90AB2PQ58FF8 381 aa33.29■■■□□ 2.92
TTC3-224ENST00000494243 USHBP1Q8N6Y0 703 aa33.29■■■□□ 2.92
TTC3-224ENST00000494243 SGIP1Q9BQI5 828 aa33.29■■■□□ 2.92
TTC3-224ENST00000494243 CLSPNQ9HAW4 1339 aa33.28■■■□□ 2.92
TTC3-224ENST00000494243 INSRP06213 1382 aa33.27■■■□□ 2.92
TTC3-224ENST00000494243 NSD2O96028 1365 aa33.26■■■□□ 2.92
TTC3-224ENST00000494243 SYTL4Q96C24 671 aaPredicted RBP33.26■■■□□ 2.91
TTC3-224ENST00000494243 PCGF6Q9BYE7 350 aa33.26■■■□□ 2.91
TTC3-224ENST00000494243 DOT1LQ8TEK3 1739 aa33.25■■■□□ 2.91
TTC3-224ENST00000494243 SLC27A3Q5K4L6 730 aa33.25■■■□□ 2.91
TTC3-224ENST00000494243 AKT1S1Q96B36 256 aa33.25■■■□□ 2.91
TTC3-224ENST00000494243 NSD3Q9BZ95 1437 aa33.25■■■□□ 2.91
TTC3-224ENST00000494243 FLT4P35916 1363 aa33.24■■■□□ 2.91
TTC3-224ENST00000494243 KIF24Q5T7B8 1368 aa33.24■■■□□ 2.91
TTC3-224ENST00000494243 SMG6Q86US8 1419 aaKnown RBP33.24■■■□□ 2.91
TTC3-224ENST00000494243 CGNL1Q0VF96 1302 aa33.24■■■□□ 2.91
TTC3-224ENST00000494243 RAPGEF4Q8WZA2 1011 aa33.22■■■□□ 2.91
TTC3-224ENST00000494243 KCNQ4P56696 695 aa33.21■■■□□ 2.91
TTC3-224ENST00000494243 DCAF8L1A6NGE4 600 aa33.2■■■□□ 2.91
TTC3-224ENST00000494243 FHDC1Q9C0D6 1143 aaPredicted RBP33.2■■■□□ 2.91
TTC3-224ENST00000494243 EMILIN1Q9Y6C2 1016 aa33.2■■■□□ 2.91
TTC3-224ENST00000494243 YY1P25490 414 aa33.19■■■□□ 2.9
TTC3-224ENST00000494243 TATP17735 454 aaPredicted RBP33.18■■■□□ 2.9
TTC3-224ENST00000494243 SYT17Q9BSW7 474 aa33.18■■■□□ 2.9
TTC3-224ENST00000494243 LY75O60449 1722 aa33.17■■■□□ 2.9
TTC3-224ENST00000494243 QSER1Q2KHR3 1735 aa33.14■■■□□ 2.9
TTC3-224ENST00000494243 PNPLA7Q6ZV29 1317 aa33.14■■■□□ 2.9
TTC3-224ENST00000494243 ARXQ96QS3 562 aa33.14■■■□□ 2.9
TTC3-224ENST00000494243 PCDH11XQ9BZA7 1347 aa33.11■■■□□ 2.89
TTC3-224ENST00000494243 PCDH11YQ9BZA8 1340 aa33.11■■■□□ 2.89
TTC3-224ENST00000494243 SLC16A10Q8TF71 515 aa33.11■■■□□ 2.89
TTC3-224ENST00000494243 CYP27B1O15528 508 aa33.1■■■□□ 2.89
TTC3-224ENST00000494243 TFCP2L1Q9NZI6 479 aa33.1■■■□□ 2.89
TTC3-224ENST00000494243 CCNL1Q9UK58 526 aaPredicted RBP33.1■■■□□ 2.89
TTC3-224ENST00000494243 ANKRD26Q9UPS8 1709 aa33.09■■■□□ 2.89
TTC3-224ENST00000494243 PPM1GO15355 546 aaPredicted RBP33.09■■■□□ 2.89
TTC3-224ENST00000494243 NCAPD2Q15021 1401 aa33.09■■■□□ 2.89
TTC3-224ENST00000494243 TUBGCP6Q96RT7 1819 aa33.09■■■□□ 2.89
TTC3-224ENST00000494243 WASHC2AQ641Q2 1341 aa33.08■■■□□ 2.89
TTC3-224ENST00000494243 MAP3K5Q99683 1374 aa33.06■■■□□ 2.88
TTC3-224ENST00000494243 COL24A1Q17RW2 1714 aa33.05■■■□□ 2.88
TTC3-224ENST00000494243 POLR3GLQ9BT43 218 aa33.05■■■□□ 2.88
TTC3-224ENST00000494243 POLKQ9UBT6 870 aa33.05■■■□□ 2.88
TTC3-224ENST00000494243 MAP2P11137 1827 aaKnown RBP33.04■■■□□ 2.88
TTC3-224ENST00000494243 PKD1L3Q7Z443 1732 aa33.03■■■□□ 2.88
TTC3-224ENST00000494243 HSPA5P11021 654 aaKnown RBP33.02■■■□□ 2.88
TTC3-224ENST00000494243 EIF4G2P78344 907 aaKnown RBP eCLIP33.02■■■□□ 2.883e-6■■■□□ 15.8
TTC3-224ENST00000494243 EYA1Q99502 592 aa33.02■■■□□ 2.88
TTC3-224ENST00000494243 MPRIPQ6WCQ1 1025 aa33.01■■■□□ 2.87
TTC3-224ENST00000494243 TOGARAM1Q9Y4F4 1720 aa33■■■□□ 2.87
TTC3-224ENST00000494243 NKX1-1Q15270 411 aaPredicted RBP32.99■■■□□ 2.87
TTC3-224ENST00000494243 COL23A1Q86Y22 540 aaPredicted RBP32.98■■■□□ 2.87
TTC3-224ENST00000494243 PALLDQ8WX93 1383 aa32.97■■■□□ 2.87
TTC3-224ENST00000494243 POLD1P28340 1107 aa32.97■■■□□ 2.87
TTC3-224ENST00000494243 SPG7Q9UQ90 795 aa32.96■■■□□ 2.87
TTC3-224ENST00000494243 ITGB4P16144 1822 aa32.95■■■□□ 2.87
TTC3-224ENST00000494243 TNNT2P45379 298 aaPredicted RBP32.95■■■□□ 2.87
TTC3-224ENST00000494243 PANK3Q9H999 370 aa32.94■■■□□ 2.86
TTC3-224ENST00000494243 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.94■■■□□ 2.864e-8■■■□□ 17.7
TTC3-224ENST00000494243 C5P01031 1676 aa32.94■■■□□ 2.86
TTC3-224ENST00000494243 EIF4A2Q14240 407 aaKnown RBP32.93■■■□□ 2.86
TTC3-224ENST00000494243 CCER1Q8TC90 406 aaPredicted RBP32.93■■■□□ 2.86
TTC3-224ENST00000494243 PIGBQ92521 554 aa32.93■■■□□ 2.86
TTC3-224ENST00000494243 SMARCC1Q92922 1105 aaPredicted RBP32.91■■■□□ 2.86
TTC3-224ENST00000494243 TAF1LQ8IZX4 1826 aa32.91■■■□□ 2.86
TTC3-224ENST00000494243 MSH5O43196 834 aa32.9■■■□□ 2.86
TTC3-224ENST00000494243 KLHL34Q8N239 644 aa32.89■■■□□ 2.86
TTC3-224ENST00000494243 PHKG2P15735 406 aa32.86■■■□□ 2.85
TTC3-224ENST00000494243 HMGB2P26583 209 aaKnown RBP32.86■■■□□ 2.85
TTC3-224ENST00000494243 IFNL2Q8IZJ0 200 aa32.85■■■□□ 2.85
TTC3-224ENST00000494243 NLGN2Q8NFZ4 835 aa32.85■■■□□ 2.85
TTC3-224ENST00000494243 UTRNP46939 3433 aa32.84■■■□□ 2.85
TTC3-224ENST00000494243 IGSF1Q8N6C5 1336 aa32.83■■■□□ 2.85
TTC3-224ENST00000494243 C4BP0C0L5 1744 aa32.83■■■□□ 2.85
TTC3-224ENST00000494243 GPR162Q16538 588 aa32.83■■■□□ 2.85
TTC3-224ENST00000494243 MSL1Q68DK7 614 aa32.83■■■□□ 2.85
TTC3-224ENST00000494243 AMIGO3Q86WK7 504 aa32.83■■■□□ 2.85
TTC3-224ENST00000494243 ZNF784Q8NCA9 323 aaPredicted RBP32.83■■■□□ 2.85
TTC3-224ENST00000494243 FLAD1Q8NFF5 587 aa32.83■■■□□ 2.85
TTC3-224ENST00000494243 CHD4Q14839 1912 aa32.82■■■□□ 2.84
TTC3-224ENST00000494243 TMOD3Q9NYL9 352 aa32.81■■■□□ 2.84
TTC3-224ENST00000494243 ASAP1Q9ULH1 1129 aa32.8■■■□□ 2.84
TTC3-224ENST00000494243 PLEKHG2Q9H7P9 1386 aa32.8■■■□□ 2.84
TTC3-224ENST00000494243 LOC102724428A0A0B4J2F2 783 aa32.79■■■□□ 2.84
TTC3-224ENST00000494243 SIK1P57059 783 aa32.79■■■□□ 2.84
TTC3-224ENST00000494243 AK7Q96M32 723 aa32.78■■■□□ 2.84
TTC3-224ENST00000494243 SMIM5Q71RC9 77 aa32.77■■■□□ 2.84
TTC3-224ENST00000494243 LINC00116Q8NCU8 138 aa32.77■■■□□ 2.84
TTC3-224ENST00000494243 MORC1Q86VD1 984 aa32.76■■■□□ 2.83
TTC3-224ENST00000494243 UBR3Q6ZT12 1888 aa32.76■■■□□ 2.83
TTC3-224ENST00000494243 ATG3Q9NT62 314 aa32.75■■■□□ 2.83
TTC3-224ENST00000494243 ITPK1Q13572 414 aa32.74■■■□□ 2.83
TTC3-224ENST00000494243 PELP1Q8IZL8 1130 aaKnown RBP32.74■■■□□ 2.83
TTC3-224ENST00000494243 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.73■■■□□ 2.83
TTC3-224ENST00000494243 PHF14O94880 888 aa32.71■■■□□ 2.83
TTC3-224ENST00000494243 KNSTRNQ9Y448 316 aa32.71■■■□□ 2.83
TTC3-224ENST00000494243 YBX3P16989 372 aaKnown RBP eCLIP32.7■■■□□ 2.834e-14■□□□□ 9.1
TTC3-224ENST00000494243 ATP6V1AP38606 617 aa32.7■■■□□ 2.83
TTC3-224ENST00000494243 PLEKHO1Q53GL0 409 aaPredicted RBP32.7■■■□□ 2.83
TTC3-224ENST00000494243 ERVV-2B6SEH9 535 aa32.69■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms