RNA–Protein interactions for RNA: ENST00000493610.2

PDCD11-206, Transcript of programmed cell death 11, humanhuman

TSL 5

Gene PDCD11, Length 732 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-206ENST00000493610 EYA1Q99502 592 aa18.75■□□□□ 0.59
PDCD11-206ENST00000493610 PARD3Q8TEW0 1356 aa18.74■□□□□ 0.59
PDCD11-206ENST00000493610 PPM1GO15355 546 aaPredicted RBP18.74■□□□□ 0.59
PDCD11-206ENST00000493610 EIF4A2Q14240 407 aaKnown RBP18.74■□□□□ 0.59
PDCD11-206ENST00000493610 BTAF1O14981 1849 aa18.73■□□□□ 0.59
PDCD11-206ENST00000493610 MORC1Q86VD1 984 aa18.73■□□□□ 0.59
PDCD11-206ENST00000493610 DOT1LQ8TEK3 1739 aa18.72■□□□□ 0.59
PDCD11-206ENST00000493610 PLSCR1O15162 318 aa18.72■□□□□ 0.59
PDCD11-206ENST00000493610 ZCRB1Q8TBF4 217 aaKnown RBP18.72■□□□□ 0.59
PDCD11-206ENST00000493610 ACSBG1Q96GR2 724 aa18.72■□□□□ 0.59
PDCD11-206ENST00000493610 NPC1L1Q9UHC9 1359 aa18.71■□□□□ 0.59
PDCD11-206ENST00000493610 DDX54Q8TDD1 881 aaKnown RBP18.71■□□□□ 0.59
PDCD11-206ENST00000493610 TOGARAM1Q9Y4F4 1720 aa18.7■□□□□ 0.58
PDCD11-206ENST00000493610 IGSF1Q8N6C5 1336 aa18.69■□□□□ 0.58
PDCD11-206ENST00000493610 PSDA5PKW4 1024 aaPredicted RBP18.68■□□□□ 0.58
PDCD11-206ENST00000493610 CYP27B1O15528 508 aa18.68■□□□□ 0.58
PDCD11-206ENST00000493610 CC2D1BQ5T0F9 858 aaKnown RBP18.67■□□□□ 0.58
PDCD11-206ENST00000493610 RAPGEF4Q8WZA2 1011 aa18.67■□□□□ 0.58
PDCD11-206ENST00000493610 TATP17735 454 aaPredicted RBP18.66■□□□□ 0.58
PDCD11-206ENST00000493610 ANO8Q9HCE9 1232 aaPredicted RBP18.66■□□□□ 0.58
PDCD11-206ENST00000493610 PAPPAQ13219 1627 aa18.66■□□□□ 0.58
PDCD11-206ENST00000493610 COL3A1P02461 1466 aaPredicted RBP18.65■□□□□ 0.58
PDCD11-206ENST00000493610 IL13P35225 146 aa18.65■□□□□ 0.58
PDCD11-206ENST00000493610 R3HDM1Q15032 1099 aaKnown RBP18.65■□□□□ 0.58
PDCD11-206ENST00000493610 MTHFSP49914 203 aa18.64■□□□□ 0.57
PDCD11-206ENST00000493610 LY75O60449 1722 aa18.63■□□□□ 0.57
PDCD11-206ENST00000493610 KAT6BQ8WYB5 2073 aa18.63■□□□□ 0.57
PDCD11-206ENST00000493610 PRIM1P49642 420 aaKnown RBP18.63■□□□□ 0.57
PDCD11-206ENST00000493610 TXNRD1Q16881 649 aa18.63■□□□□ 0.57
PDCD11-206ENST00000493610 AEBP1Q8IUX7 1158 aa18.63■□□□□ 0.57
PDCD11-206ENST00000493610 ITGB4P16144 1822 aa18.63■□□□□ 0.57
PDCD11-206ENST00000493610 SRCAPQ6ZRS2 3230 aa18.62■□□□□ 0.57
PDCD11-206ENST00000493610 PCDH11XQ9BZA7 1347 aa18.62■□□□□ 0.57
PDCD11-206ENST00000493610 PCDH11YQ9BZA8 1340 aa18.62■□□□□ 0.57
PDCD11-206ENST00000493610 LRP5O75197 1615 aa18.61■□□□□ 0.57
PDCD11-206ENST00000493610 KDRP35968 1356 aa18.61■□□□□ 0.57
PDCD11-206ENST00000493610 NKX1-1Q15270 411 aaPredicted RBP18.61■□□□□ 0.57
PDCD11-206ENST00000493610 LRRC4BQ9NT99 713 aa18.61■□□□□ 0.57
PDCD11-206ENST00000493610 CASZ1Q86V15 1759 aa18.6■□□□□ 0.57
PDCD11-206ENST00000493610 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.6■□□□□ 0.578e-7■■■■□ 21.7
PDCD11-206ENST00000493610 PLEKHG2Q9H7P9 1386 aa18.59■□□□□ 0.57
PDCD11-206ENST00000493610 PHKG2P15735 406 aa18.57■□□□□ 0.56
PDCD11-206ENST00000493610 CNGB1Q14028 1251 aaPredicted RBP18.57■□□□□ 0.56
PDCD11-206ENST00000493610 PDGFDQ9GZP0 370 aaPredicted RBP18.57■□□□□ 0.56
PDCD11-206ENST00000493610 SPG7Q9UQ90 795 aa18.56■□□□□ 0.56
PDCD11-206ENST00000493610 KCNQ4P56696 695 aa18.55■□□□□ 0.56
PDCD11-206ENST00000493610 SULT6B1Q6IMI4 303 aa18.55■□□□□ 0.56
PDCD11-206ENST00000493610 SYTL4Q96C24 671 aaPredicted RBP18.55■□□□□ 0.56
PDCD11-206ENST00000493610 KDM6AO15550 1401 aaPredicted RBP18.54■□□□□ 0.56
PDCD11-206ENST00000493610 TUBGCP6Q96RT7 1819 aa18.53■□□□□ 0.56
PDCD11-206ENST00000493610 ZNF827Q17R98 1081 aa18.53■□□□□ 0.56
PDCD11-206ENST00000493610 NBPF14Q5TI25 921 aa18.53■□□□□ 0.56
PDCD11-206ENST00000493610 PPP2R1AP30153 589 aa18.52■□□□□ 0.56
PDCD11-206ENST00000493610 IFNL2Q8IZJ0 200 aa18.52■□□□□ 0.56
PDCD11-206ENST00000493610 PIGBQ92521 554 aa18.52■□□□□ 0.56
PDCD11-206ENST00000493610 SLC15A2Q16348 729 aa18.51■□□□□ 0.55
PDCD11-206ENST00000493610 AKT1S1Q96B36 256 aa18.51■□□□□ 0.55
PDCD11-206ENST00000493610 TAF1LQ8IZX4 1826 aa18.51■□□□□ 0.55
PDCD11-206ENST00000493610 QSER1Q2KHR3 1735 aa18.5■□□□□ 0.55
PDCD11-206ENST00000493610 DIAPH1O60610 1272 aaKnown RBP18.5■□□□□ 0.55
PDCD11-206ENST00000493610 HMOX1P09601 288 aa18.5■□□□□ 0.55
PDCD11-206ENST00000493610 MPRIPQ6WCQ1 1025 aa18.5■□□□□ 0.55
PDCD11-206ENST00000493610 SLC27A3Q5K4L6 730 aa18.49■□□□□ 0.55
PDCD11-206ENST00000493610 ADAMTS7Q9UKP4 1686 aa18.49■□□□□ 0.55
PDCD11-206ENST00000493610 SCN11AQ9UI33 1791 aa18.48■□□□□ 0.55
PDCD11-206ENST00000493610 PLEKHO1Q53GL0 409 aaPredicted RBP18.48■□□□□ 0.55
PDCD11-206ENST00000493610 C5P01031 1676 aa18.47■□□□□ 0.55
PDCD11-206ENST00000493610 PALLDQ8WX93 1383 aa18.47■□□□□ 0.55
PDCD11-206ENST00000493610 AMOTQ4VCS5 1084 aa18.47■□□□□ 0.55
PDCD11-206ENST00000493610 ZNF530Q6P9A1 599 aaPredicted RBP18.47■□□□□ 0.55
PDCD11-206ENST00000493610 VIRMAQ69YN4 1812 aaKnown RBP18.46■□□□□ 0.55
PDCD11-206ENST00000493610 STK32BQ9NY57 414 aa18.46■□□□□ 0.55
PDCD11-206ENST00000493610 ASAP1Q9ULH1 1129 aa18.45■□□□□ 0.54
PDCD11-206ENST00000493610 COL24A1Q17RW2 1714 aa18.44■□□□□ 0.54
PDCD11-206ENST00000493610 DDX10Q13206 875 aaKnown RBP18.44■□□□□ 0.54
PDCD11-206ENST00000493610 MTHFSDQ2M296 383 aaKnown RBP18.44■□□□□ 0.54
PDCD11-206ENST00000493610 DCAF5Q96JK2 942 aa18.44■□□□□ 0.54
PDCD11-206ENST00000493610 ATG3Q9NT62 314 aa18.44■□□□□ 0.54
PDCD11-206ENST00000493610 CCNL1Q9UK58 526 aaPredicted RBP18.44■□□□□ 0.54
PDCD11-206ENST00000493610 ERVV-2B6SEH9 535 aa18.43■□□□□ 0.54
PDCD11-206ENST00000493610 SLC4A9Q96Q91 983 aa18.43■□□□□ 0.54
PDCD11-206ENST00000493610 PNPLA7Q6ZV29 1317 aa18.43■□□□□ 0.54
PDCD11-206ENST00000493610 MRC1P22897 1456 aa18.42■□□□□ 0.54
PDCD11-206ENST00000493610 PTGER2P43116 358 aa18.42■□□□□ 0.54
PDCD11-206ENST00000493610 AMIGO3Q86WK7 504 aa18.42■□□□□ 0.54
PDCD11-206ENST00000493610 SGIP1Q9BQI5 828 aa18.42■□□□□ 0.54
PDCD11-206ENST00000493610 TMOD3Q9NYL9 352 aa18.42■□□□□ 0.54
PDCD11-206ENST00000493610 C4BP0C0L5 1744 aa18.42■□□□□ 0.54
PDCD11-206ENST00000493610 ZNF831Q5JPB2 1677 aa18.41■□□□□ 0.54
PDCD11-206ENST00000493610 ITPK1Q13572 414 aa18.41■□□□□ 0.54
PDCD11-206ENST00000493610 RSPH6AQ9H0K4 717 aa18.41■□□□□ 0.54
PDCD11-206ENST00000493610 LGR6Q9HBX8 967 aa18.41■□□□□ 0.54
PDCD11-206ENST00000493610 U2SURPO15042 1029 aaKnown RBP18.4■□□□□ 0.54
PDCD11-206ENST00000493610 ZBTB7AO95365 584 aa18.4■□□□□ 0.54
PDCD11-206ENST00000493610 HSP90AB1P08238 724 aaKnown RBP18.4■□□□□ 0.54
PDCD11-206ENST00000493610 AKAP4Q5JQC9 854 aa18.4■□□□□ 0.54
PDCD11-206ENST00000493610 SMARCC1Q92922 1105 aaPredicted RBP18.4■□□□□ 0.54
PDCD11-206ENST00000493610 PHACTR3Q96KR7 559 aa18.4■□□□□ 0.54
PDCD11-206ENST00000493610 UBR3Q6ZT12 1888 aa18.39■□□□□ 0.54
PDCD11-206ENST00000493610 LOC102724428A0A0B4J2F2 783 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms