RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 KAT6BQ8WYB5 2073 aa15.5■□□□□ 0.07
SNRNP200-207ENST00000493271 MAP3K19Q56UN5 1328 aa15.5■□□□□ 0.07
SNRNP200-207ENST00000493271 SENP3-EIF4A1A0A087X0R7 540 aa15.5■□□□□ 0.07
SNRNP200-207ENST00000493271 AMPHP49418 695 aa15.5■□□□□ 0.07
SNRNP200-207ENST00000493271 PRIM1P49642 420 aaKnown RBP15.5■□□□□ 0.07
SNRNP200-207ENST00000493271 ZCRB1Q8TBF4 217 aaKnown RBP15.5■□□□□ 0.07
SNRNP200-207ENST00000493271 LTV1Q96GA3 475 aaPredicted RBP15.49■□□□□ 0.07
SNRNP200-207ENST00000493271 NSD2O96028 1365 aa15.49■□□□□ 0.07
SNRNP200-207ENST00000493271 USP47Q96K76 1375 aa15.49■□□□□ 0.07
SNRNP200-207ENST00000493271 DOT1LQ8TEK3 1739 aa15.48■□□□□ 0.07
SNRNP200-207ENST00000493271 GRIN3BO60391 1043 aa15.48■□□□□ 0.07
SNRNP200-207ENST00000493271 KLHL34Q8N239 644 aa15.48■□□□□ 0.07
SNRNP200-207ENST00000493271 CCNL1Q9UK58 526 aaPredicted RBP15.48■□□□□ 0.07
SNRNP200-207ENST00000493271 SMG6Q86US8 1419 aaKnown RBP15.48■□□□□ 0.07
SNRNP200-207ENST00000493271 GIGYF1O75420 1035 aaPredicted RBP15.47■□□□□ 0.07
SNRNP200-207ENST00000493271 FLAD1Q8NFF5 587 aa15.46■□□□□ 0.07
SNRNP200-207ENST00000493271 TESK2Q96S53 571 aa15.46■□□□□ 0.07
SNRNP200-207ENST00000493271 MEGF6O75095 1541 aa15.46■□□□□ 0.07
SNRNP200-207ENST00000493271 TUBGCP6Q96RT7 1819 aa15.45■□□□□ 0.06
SNRNP200-207ENST00000493271 RAPGEF4Q8WZA2 1011 aa15.45■□□□□ 0.06
SNRNP200-207ENST00000493271 KIF24Q5T7B8 1368 aa15.45■□□□□ 0.06
SNRNP200-207ENST00000493271 SHANK3Q9BYB0 1731 aa15.45■□□□□ 0.06
SNRNP200-207ENST00000493271 GOLGB1Q14789 3259 aaKnown RBP15.44■□□□□ 0.06
SNRNP200-207ENST00000493271 PELP1Q8IZL8 1130 aaKnown RBP15.44■□□□□ 0.06
SNRNP200-207ENST00000493271 ST20-MTHFSA0A0A6YYL1 179 aa15.43■□□□□ 0.06
SNRNP200-207ENST00000493271 TATP17735 454 aaPredicted RBP15.43■□□□□ 0.06
SNRNP200-207ENST00000493271 PCDH11XQ9BZA7 1347 aa15.43■□□□□ 0.06
SNRNP200-207ENST00000493271 PCDH11YQ9BZA8 1340 aa15.43■□□□□ 0.06
SNRNP200-207ENST00000493271 MSH5O43196 834 aa15.42■□□□□ 0.06
SNRNP200-207ENST00000493271 KCNQ4P56696 695 aa15.42■□□□□ 0.06
SNRNP200-207ENST00000493271 NBPF6Q5VWK0 638 aa15.42■□□□□ 0.06
SNRNP200-207ENST00000493271 NLGN2Q8NFZ4 835 aa15.42■□□□□ 0.06
SNRNP200-207ENST00000493271 NBPF4Q96M43 638 aa15.42■□□□□ 0.06
SNRNP200-207ENST00000493271 CD2APQ9Y5K6 639 aa15.42■□□□□ 0.06
SNRNP200-207ENST00000493271 INSRP06213 1382 aa15.41■□□□□ 0.06
SNRNP200-207ENST00000493271 COL23A1Q86Y22 540 aaPredicted RBP15.41■□□□□ 0.06
SNRNP200-207ENST00000493271 NSD3Q9BZ95 1437 aa15.41■□□□□ 0.06
SNRNP200-207ENST00000493271 FLT4P35916 1363 aa15.4■□□□□ 0.06
SNRNP200-207ENST00000493271 FYB1O15117 783 aa15.4■□□□□ 0.06
SNRNP200-207ENST00000493271 TMF1P82094 1093 aa15.4■□□□□ 0.06
SNRNP200-207ENST00000493271 CDCA8Q53HL2 280 aa15.4■□□□□ 0.06
SNRNP200-207ENST00000493271 RGPD2P0DJD1 1756 aa15.39■□□□□ 0.05
SNRNP200-207ENST00000493271 C5P01031 1676 aa15.39■□□□□ 0.05
SNRNP200-207ENST00000493271 RRS1Q15050 365 aaKnown RBP15.39■□□□□ 0.05
SNRNP200-207ENST00000493271 SMARCC1Q92922 1105 aaPredicted RBP15.39■□□□□ 0.05
SNRNP200-207ENST00000493271 PALLDQ8WX93 1383 aa15.38■□□□□ 0.05
SNRNP200-207ENST00000493271 YBX3P16989 372 aaKnown RBP eCLIP15.38■□□□□ 0.051e-7■□□□□ 8.9
SNRNP200-207ENST00000493271 FBLN1P23142 703 aa15.37■□□□□ 0.05
SNRNP200-207ENST00000493271 GGNBP2Q9H3C7 697 aa15.37■□□□□ 0.05
SNRNP200-207ENST00000493271 USHBP1Q8N6Y0 703 aa15.35■□□□□ 0.05
SNRNP200-207ENST00000493271 AK7Q96M32 723 aa15.35■□□□□ 0.05
SNRNP200-207ENST00000493271 TAF1LQ8IZX4 1826 aa15.34■□□□□ 0.05
SNRNP200-207ENST00000493271 HSP90AB2PQ58FF8 381 aa15.34■□□□□ 0.05
SNRNP200-207ENST00000493271 MSL1Q68DK7 614 aa15.34■□□□□ 0.05
SNRNP200-207ENST00000493271 MPRIPQ6WCQ1 1025 aa15.34■□□□□ 0.05
SNRNP200-207ENST00000493271 C4BP0C0L5 1744 aa15.34■□□□□ 0.05
SNRNP200-207ENST00000493271 ATP10DQ9P241 1426 aa15.34■□□□□ 0.05
SNRNP200-207ENST00000493271 KIF20BQ96Q89 1820 aa15.33■□□□□ 0.05
SNRNP200-207ENST00000493271 GPBP1L1Q9HC44 474 aaPredicted RBP15.33■□□□□ 0.04
SNRNP200-207ENST00000493271 SPG7Q9UQ90 795 aa15.33■□□□□ 0.04
SNRNP200-207ENST00000493271 PLEKHG2Q9H7P9 1386 aa15.33■□□□□ 0.04
SNRNP200-207ENST00000493271 NCAPD2Q15021 1401 aa15.33■□□□□ 0.04
SNRNP200-207ENST00000493271 PKD1L3Q7Z443 1732 aa15.32■□□□□ 0.04
SNRNP200-207ENST00000493271 CYP27B1O15528 508 aa15.32■□□□□ 0.04
SNRNP200-207ENST00000493271 SSFA2P28290 1259 aa15.32■□□□□ 0.04
SNRNP200-207ENST00000493271 NKX1-1Q15270 411 aaPredicted RBP15.32■□□□□ 0.04
SNRNP200-207ENST00000493271 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.32■□□□□ 0.04
SNRNP200-207ENST00000493271 ADCY9O60503 1353 aa15.32■□□□□ 0.04
SNRNP200-207ENST00000493271 CEP350Q5VT06 3117 aa15.31■□□□□ 0.04
SNRNP200-207ENST00000493271 IFFO2Q5TF58 517 aa15.3■□□□□ 0.04
SNRNP200-207ENST00000493271 TOGARAM1Q9Y4F4 1720 aa15.29■□□□□ 0.04
SNRNP200-207ENST00000493271 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.29■□□□□ 0.04
SNRNP200-207ENST00000493271 ITGB4P16144 1822 aa15.29■□□□□ 0.04
SNRNP200-207ENST00000493271 WASHC2AQ641Q2 1341 aa15.28■□□□□ 0.04
SNRNP200-207ENST00000493271 IGSF1Q8N6C5 1336 aa15.28■□□□□ 0.04
SNRNP200-207ENST00000493271 LOC102724428A0A0B4J2F2 783 aa15.28■□□□□ 0.04
SNRNP200-207ENST00000493271 SIK1P57059 783 aa15.28■□□□□ 0.04
SNRNP200-207ENST00000493271 PIGBQ92521 554 aa15.28■□□□□ 0.04
SNRNP200-207ENST00000493271 UBR3Q6ZT12 1888 aa15.28■□□□□ 0.04
SNRNP200-207ENST00000493271 ANKRD26Q9UPS8 1709 aa15.27■□□□□ 0.04
SNRNP200-207ENST00000493271 TMOD3Q9NYL9 352 aa15.27■□□□□ 0.04
SNRNP200-207ENST00000493271 IFNL2Q8IZJ0 200 aa15.26■□□□□ 0.03
SNRNP200-207ENST00000493271 EMILIN1Q9Y6C2 1016 aa15.26■□□□□ 0.03
SNRNP200-207ENST00000493271 MAP2P11137 1827 aaKnown RBP15.25■□□□□ 0.03
SNRNP200-207ENST00000493271 PHF14O94880 888 aa15.25■□□□□ 0.03
SNRNP200-207ENST00000493271 HSPA6P17066 643 aa15.25■□□□□ 0.03
SNRNP200-207ENST00000493271 LINC00116Q8NCU8 138 aa15.24■□□□□ 0.03
SNRNP200-207ENST00000493271 CARD14Q9BXL6 1004 aa15.24■□□□□ 0.03
SNRNP200-207ENST00000493271 CICQ96RK0 1608 aaPredicted RBP15.24■□□□□ 0.03
SNRNP200-207ENST00000493271 PPM1GO15355 546 aaPredicted RBP15.23■□□□□ 0.03
SNRNP200-207ENST00000493271 PHKG2P15735 406 aa15.23■□□□□ 0.03
SNRNP200-207ENST00000493271 ATP6V1AP38606 617 aa15.23■□□□□ 0.03
SNRNP200-207ENST00000493271 AMIGO3Q86WK7 504 aa15.23■□□□□ 0.03
SNRNP200-207ENST00000493271 GNPATO15228 680 aa15.22■□□□□ 0.03
SNRNP200-207ENST00000493271 TGFB2P61812 414 aa15.22■□□□□ 0.03
SNRNP200-207ENST00000493271 NLGN1Q8N2Q7 840 aa15.22■□□□□ 0.03
SNRNP200-207ENST00000493271 EYA1Q99502 592 aa15.22■□□□□ 0.03
SNRNP200-207ENST00000493271 TIMELESSQ9UNS1 1208 aa15.22■□□□□ 0.03
SNRNP200-207ENST00000493271 ZNF831Q5JPB2 1677 aa15.22■□□□□ 0.03
SNRNP200-207ENST00000493271 HSP90AB1P08238 724 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms