RNA–Protein interactions for RNA: ENST00000493199.1

NEK4-205, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 355 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-205ENST00000493199 CCDC27Q2M243 656 aa6.94□□□□□ -1.3
NEK4-205ENST00000493199 WDR63Q8IWG1 891 aa6.94□□□□□ -1.3
NEK4-205ENST00000493199 ZCRB1Q8TBF4 217 aaKnown RBP6.94□□□□□ -1.3
NEK4-205ENST00000493199 USP35Q9P2H5 1018 aa6.94□□□□□ -1.3
NEK4-205ENST00000493199 NFAT5O94916 1531 aa6.94□□□□□ -1.3
NEK4-205ENST00000493199 LTN1O94822 1766 aa6.94□□□□□ -1.3
NEK4-205ENST00000493199 PCDH11XQ9BZA7 1347 aa6.94□□□□□ -1.3
NEK4-205ENST00000493199 PCDH11YQ9BZA8 1340 aa6.94□□□□□ -1.3
NEK4-205ENST00000493199 GNAI1P63096 354 aa6.93□□□□□ -1.3
NEK4-205ENST00000493199 GOLGA2Q08379 1002 aa6.93□□□□□ -1.3
NEK4-205ENST00000493199 NFE2L2Q16236 605 aa6.93□□□□□ -1.3
NEK4-205ENST00000493199 DDB1Q16531 1140 aa6.93□□□□□ -1.3
NEK4-205ENST00000493199 AKAP4Q5JQC9 854 aa6.93□□□□□ -1.3
NEK4-205ENST00000493199 NBPF6Q5VWK0 638 aa6.93□□□□□ -1.3
NEK4-205ENST00000493199 BARGINQ6ZT62 677 aa6.93□□□□□ -1.3
NEK4-205ENST00000493199 CCDC125Q86Z20 511 aa6.93□□□□□ -1.3
NEK4-205ENST00000493199 NBPF4Q96M43 638 aa6.93□□□□□ -1.3
NEK4-205ENST00000493199 YTHDC1Q96MU7 727 aaKnown RBP6.93□□□□□ -1.3
NEK4-205ENST00000493199 RSPH6AQ9H0K4 717 aa6.93□□□□□ -1.3
NEK4-205ENST00000493199 BABAM1Q9NWV8 329 aa6.93□□□□□ -1.3
NEK4-205ENST00000493199 AXIN2Q9Y2T1 843 aa6.93□□□□□ -1.3
NEK4-205ENST00000493199 ATRNO75882 1429 aa6.93□□□□□ -1.3
NEK4-205ENST00000493199 E9PSI1 815 aa6.92□□□□□ -1.3
NEK4-205ENST00000493199 APAF1O14727 1248 aa6.92□□□□□ -1.3
NEK4-205ENST00000493199 TMPOP42166 694 aaKnown RBP6.92□□□□□ -1.3
NEK4-205ENST00000493199 ZNF530Q6P9A1 599 aaPredicted RBP6.92□□□□□ -1.3
NEK4-205ENST00000493199 GJD4Q96KN9 370 aaPredicted RBP6.92□□□□□ -1.3
NEK4-205ENST00000493199 ZBED9Q6R2W3 1325 aa6.92□□□□□ -1.3
NEK4-205ENST00000493199 KDRP35968 1356 aa6.92□□□□□ -1.3
NEK4-205ENST00000493199 NWD2Q9ULI1 1742 aa6.91□□□□□ -1.3
NEK4-205ENST00000493199 LARP1Q6PKG0 1096 aaKnown RBP6.91□□□□□ -1.3
NEK4-205ENST00000493199 NPM2Q86SE8 214 aaKnown RBP6.91□□□□□ -1.3
NEK4-205ENST00000493199 CCDC146Q8IYE0 955 aa6.91□□□□□ -1.3
NEK4-205ENST00000493199 TTC5Q8N0Z6 440 aa6.91□□□□□ -1.3
NEK4-205ENST00000493199 DCAF5Q96JK2 942 aa6.91□□□□□ -1.3
NEK4-205ENST00000493199 IL16Q14005 1332 aa6.91□□□□□ -1.3
NEK4-205ENST00000493199 SPATA31A1Q5TZJ5 1347 aa6.91□□□□□ -1.3
NEK4-205ENST00000493199 COL5A2P05997 1499 aaPredicted RBP6.91□□□□□ -1.3
NEK4-205ENST00000493199 MARF1Q9Y4F3 1742 aaKnown RBP6.9□□□□□ -1.3
NEK4-205ENST00000493199 CT47B1P0C2W7 299 aaPredicted RBP6.9□□□□□ -1.3
NEK4-205ENST00000493199 HOXD11P31277 338 aaPredicted RBP6.9□□□□□ -1.3
NEK4-205ENST00000493199 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.9□□□□□ -1.3
NEK4-205ENST00000493199 DDX54Q8TDD1 881 aaKnown RBP6.9□□□□□ -1.3
NEK4-205ENST00000493199 ZNF428Q96B54 188 aa6.9□□□□□ -1.3
NEK4-205ENST00000493199 PLEKHF1Q96S99 279 aa6.9□□□□□ -1.3
NEK4-205ENST00000493199 SALL2Q9Y467 1007 aaPredicted RBP6.9□□□□□ -1.3
NEK4-205ENST00000493199 SPATA31A5Q5VU36 1347 aa6.9□□□□□ -1.3
NEK4-205ENST00000493199 SPATA31A7Q8IWB4 1347 aa6.9□□□□□ -1.3
NEK4-205ENST00000493199 BCL9LQ86UU0 1499 aa6.9□□□□□ -1.31
NEK4-205ENST00000493199 SLIT2O94813 1529 aa6.9□□□□□ -1.31
NEK4-205ENST00000493199 EP400Q96L91 3159 aa6.9□□□□□ -1.31
NEK4-205ENST00000493199 ERVV-2B6SEH9 535 aa6.89□□□□□ -1.31
NEK4-205ENST00000493199 CABP4P57796 275 aa6.89□□□□□ -1.31
NEK4-205ENST00000493199 TAF7Q15545 349 aaPredicted RBP6.89□□□□□ -1.31
NEK4-205ENST00000493199 MTHFSDQ2M296 383 aaKnown RBP6.89□□□□□ -1.31
NEK4-205ENST00000493199 CCDC184Q52MB2 194 aa6.89□□□□□ -1.31
NEK4-205ENST00000493199 WWC1Q8IX03 1113 aa6.89□□□□□ -1.31
NEK4-205ENST00000493199 SOS1Q07889 1333 aaPredicted RBP6.89□□□□□ -1.31
NEK4-205ENST00000493199 MAP3K5Q99683 1374 aa6.89□□□□□ -1.31
NEK4-205ENST00000493199 OVOS2A0A0G2JMS6 1433 aa6.89□□□□□ -1.31
NEK4-205ENST00000493199 NCAPD2Q15021 1401 aa6.89□□□□□ -1.31
NEK4-205ENST00000493199 CAMTA1Q9Y6Y1 1673 aa6.89□□□□□ -1.31
NEK4-205ENST00000493199 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.88□□□□□ -1.31
NEK4-205ENST00000493199 COL3A1P02461 1466 aaPredicted RBP6.88□□□□□ -1.31
NEK4-205ENST00000493199 MS4A1P11836 297 aa6.88□□□□□ -1.31
NEK4-205ENST00000493199 USHBP1Q8N6Y0 703 aa6.88□□□□□ -1.31
NEK4-205ENST00000493199 CFAP44Q96MT7 982 aa6.88□□□□□ -1.31
NEK4-205ENST00000493199 TEX13AQ9BXU3 409 aaPredicted RBP6.88□□□□□ -1.31
NEK4-205ENST00000493199 RNF39Q9H2S5 420 aa6.88□□□□□ -1.31
NEK4-205ENST00000493199 IFT57Q9NWB7 429 aa6.88□□□□□ -1.31
NEK4-205ENST00000493199 LAS1LQ9Y4W2 734 aaKnown RBP6.88□□□□□ -1.31
NEK4-205ENST00000493199 ABCA3Q99758 1704 aa6.87□□□□□ -1.31
NEK4-205ENST00000493199 CRYBG1Q9Y4K1 1723 aa6.87□□□□□ -1.31
NEK4-205ENST00000493199 BTBD11A6QL63 1104 aa6.87□□□□□ -1.31
NEK4-205ENST00000493199 PHKG2P15735 406 aa6.87□□□□□ -1.31
NEK4-205ENST00000493199 SF3B2Q13435 895 aaKnown RBP6.87□□□□□ -1.31
NEK4-205ENST00000493199 FAM98CQ17RN3 349 aaKnown RBP6.87□□□□□ -1.31
NEK4-205ENST00000493199 FAM196AQ6ZSG2 479 aa6.87□□□□□ -1.31
NEK4-205ENST00000493199 AEBP1Q8IUX7 1158 aa6.87□□□□□ -1.31
NEK4-205ENST00000493199 SMARCC1Q92922 1105 aaPredicted RBP6.87□□□□□ -1.31
NEK4-205ENST00000493199 TMOD3Q9NYL9 352 aa6.87□□□□□ -1.31
NEK4-205ENST00000493199 LMO7Q8WWI1 1683 aa6.87□□□□□ -1.31
NEK4-205ENST00000493199 RNMTO43148 476 aaKnown RBP6.86□□□□□ -1.31
NEK4-205ENST00000493199 ONECUT3O60422 494 aaPredicted RBP6.86□□□□□ -1.31
NEK4-205ENST00000493199 NEFLP07196 543 aa6.86□□□□□ -1.31
NEK4-205ENST00000493199 NKX1-1Q15270 411 aaPredicted RBP6.86□□□□□ -1.31
NEK4-205ENST00000493199 SYTL4Q96C24 671 aaPredicted RBP6.86□□□□□ -1.31
NEK4-205ENST00000493199 PHACTR3Q96KR7 559 aa6.86□□□□□ -1.31
NEK4-205ENST00000493199 CHMP4BQ9H444 224 aaKnown RBP6.86□□□□□ -1.31
NEK4-205ENST00000493199 TSPYL4Q9UJ04 414 aa6.86□□□□□ -1.31
NEK4-205ENST00000493199 RRP7AQ9Y3A4 280 aaKnown RBP6.86□□□□□ -1.31
NEK4-205ENST00000493199 COL18A1P39060 1754 aa6.86□□□□□ -1.31
NEK4-205ENST00000493199 PEAK1Q9H792 1746 aa6.86□□□□□ -1.31
NEK4-205ENST00000493199 PARP4Q9UKK3 1724 aaKnown RBP6.86□□□□□ -1.31
NEK4-205ENST00000493199 PLCH1Q4KWH8 1693 aa6.86□□□□□ -1.31
NEK4-205ENST00000493199 DCAF8L1A6NGE4 600 aa6.85□□□□□ -1.31
NEK4-205ENST00000493199 IPO8O15397 1037 aaKnown RBP6.85□□□□□ -1.31
NEK4-205ENST00000493199 MPRIPQ6WCQ1 1025 aa6.85□□□□□ -1.31
NEK4-205ENST00000493199 KRT27Q7Z3Y8 459 aa6.85□□□□□ -1.31
NEK4-205ENST00000493199 SEPT12Q8IYM1 358 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms