RNA–Protein interactions for RNA: ENST00000493082.5

BRD9-210, Transcript of bromodomain containing 9, humanhuman

TSL 5

Gene BRD9, Length 750 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-210ENST00000493082 U2AF1Q01081 240 aaKnown RBP eCLIP17.62■□□□□ 0.41
BRD9-210ENST00000493082 SEPT12Q8IYM1 358 aa17.62■□□□□ 0.41
BRD9-210ENST00000493082 ONECUT3O60422 494 aaPredicted RBP17.61■□□□□ 0.41
BRD9-210ENST00000493082 TNS2Q63HR2 1409 aa17.61■□□□□ 0.41
BRD9-210ENST00000493082 RSPH6AQ9H0K4 717 aa17.6■□□□□ 0.41
BRD9-210ENST00000493082 NUDCQ9Y266 331 aa17.6■□□□□ 0.41
BRD9-210ENST00000493082 DOT1LQ8TEK3 1739 aa17.6■□□□□ 0.41
BRD9-210ENST00000493082 TOGARAM1Q9Y4F4 1720 aa17.6■□□□□ 0.41
BRD9-210ENST00000493082 FAM182BQ5T319 152 aa17.59■□□□□ 0.41
BRD9-210ENST00000493082 RAPGEF4Q8WZA2 1011 aa17.59■□□□□ 0.41
BRD9-210ENST00000493082 ITGB4P16144 1822 aa17.58■□□□□ 0.41
BRD9-210ENST00000493082 TATP17735 454 aaPredicted RBP17.58■□□□□ 0.4
BRD9-210ENST00000493082 ILDR2Q71H61 639 aa17.58■□□□□ 0.4
BRD9-210ENST00000493082 PRKAR2BP31323 418 aa17.57■□□□□ 0.4
BRD9-210ENST00000493082 SCN11AQ9UI33 1791 aa17.57■□□□□ 0.4
BRD9-210ENST00000493082 DDB1Q16531 1140 aa17.56■□□□□ 0.4
BRD9-210ENST00000493082 CCDC146Q8IYE0 955 aa17.56■□□□□ 0.4
BRD9-210ENST00000493082 ADAMTS8Q9UP79 889 aa17.56■□□□□ 0.4
BRD9-210ENST00000493082 WDR43Q15061 677 aaKnown RBP eCLIP17.55■□□□□ 0.4
BRD9-210ENST00000493082 PNISRQ8TF01 805 aaKnown RBP17.55■□□□□ 0.4
BRD9-210ENST00000493082 PHACTR3Q96KR7 559 aa17.55■□□□□ 0.4
BRD9-210ENST00000493082 CDCA7Q9BWT1 371 aaPredicted RBP17.55■□□□□ 0.4
BRD9-210ENST00000493082 SENP3-EIF4A1A0A087X0R7 540 aa17.54■□□□□ 0.4
BRD9-210ENST00000493082 MARCH10Q8NA82 808 aaPredicted RBP17.54■□□□□ 0.4
BRD9-210ENST00000493082 ZCRB1Q8TBF4 217 aaKnown RBP17.54■□□□□ 0.4
BRD9-210ENST00000493082 CCER2I3L3R5 266 aa17.53■□□□□ 0.4
BRD9-210ENST00000493082 EXOC5O00471 708 aa17.53■□□□□ 0.4
BRD9-210ENST00000493082 DDX54Q8TDD1 881 aaKnown RBP17.53■□□□□ 0.4
BRD9-210ENST00000493082 PLEKHF1Q96S99 279 aa17.53■□□□□ 0.4
BRD9-210ENST00000493082 CYP27B1O15528 508 aa17.52■□□□□ 0.4
BRD9-210ENST00000493082 FCHSD2O94868 740 aa17.52■□□□□ 0.4
BRD9-210ENST00000493082 MTHFSDQ2M296 383 aaKnown RBP17.52■□□□□ 0.4
BRD9-210ENST00000493082 KRT27Q7Z3Y8 459 aa17.52■□□□□ 0.4
BRD9-210ENST00000493082 FAM9BQ8IZU0 186 aa17.52■□□□□ 0.4
BRD9-210ENST00000493082 PDE3BQ13370 1112 aa17.51■□□□□ 0.39
BRD9-210ENST00000493082 TNS1Q9HBL0 1735 aaKnown RBP17.51■□□□□ 0.39
BRD9-210ENST00000493082 NHSQ6T4R5 1651 aa17.51■□□□□ 0.39
BRD9-210ENST00000493082 BTAF1O14981 1849 aa17.5■□□□□ 0.39
BRD9-210ENST00000493082 ZNF530Q6P9A1 599 aaPredicted RBP17.5■□□□□ 0.39
BRD9-210ENST00000493082 ADAMTS7Q9UKP4 1686 aa17.5■□□□□ 0.39
BRD9-210ENST00000493082 SIPA1L3O60292 1781 aaPredicted RBP17.5■□□□□ 0.39
BRD9-210ENST00000493082 PLEKHO1Q53GL0 409 aaPredicted RBP17.49■□□□□ 0.39
BRD9-210ENST00000493082 SPG7Q9UQ90 795 aa17.49■□□□□ 0.39
BRD9-210ENST00000493082 PCDH11XQ9BZA7 1347 aa17.48■□□□□ 0.39
BRD9-210ENST00000493082 PCDH11YQ9BZA8 1340 aa17.48■□□□□ 0.39
BRD9-210ENST00000493082 KDM6AO15550 1401 aaPredicted RBP17.47■□□□□ 0.39
BRD9-210ENST00000493082 PHKG2P15735 406 aa17.47■□□□□ 0.39
BRD9-210ENST00000493082 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.47■□□□□ 0.39
BRD9-210ENST00000493082 PLEKHG2Q9H7P9 1386 aa17.46■□□□□ 0.39
BRD9-210ENST00000493082 AMOTQ4VCS5 1084 aa17.46■□□□□ 0.39
BRD9-210ENST00000493082 PTF1AQ7RTS3 328 aa17.46■□□□□ 0.39
BRD9-210ENST00000493082 ACSBG1Q96GR2 724 aa17.46■□□□□ 0.39
BRD9-210ENST00000493082 RRP7AQ9Y3A4 280 aaKnown RBP17.46■□□□□ 0.39
BRD9-210ENST00000493082 EP400Q96L91 3159 aa17.46■□□□□ 0.39
BRD9-210ENST00000493082 RUNDC1Q96C34 613 aa17.45■□□□□ 0.38
BRD9-210ENST00000493082 MAPK8IP3Q9UPT6 1336 aa17.45■□□□□ 0.38
BRD9-210ENST00000493082 IFNL2Q8IZJ0 200 aa17.44■□□□□ 0.38
BRD9-210ENST00000493082 MAP3K5Q99683 1374 aa17.43■□□□□ 0.38
BRD9-210ENST00000493082 C1orf141Q5JVX7 400 aa17.43■□□□□ 0.38
BRD9-210ENST00000493082 MPRIPQ6WCQ1 1025 aa17.43■□□□□ 0.38
BRD9-210ENST00000493082 GAS2L2Q8NHY3 880 aa17.43■□□□□ 0.38
BRD9-210ENST00000493082 LGR6Q9HBX8 967 aa17.43■□□□□ 0.38
BRD9-210ENST00000493082 APAF1O14727 1248 aa17.42■□□□□ 0.38
BRD9-210ENST00000493082 KCNQ2O43526 872 aa17.42■□□□□ 0.38
BRD9-210ENST00000493082 DCTN1Q14203 1278 aa17.42■□□□□ 0.38
BRD9-210ENST00000493082 NEUROD2Q15784 382 aa17.42■□□□□ 0.38
BRD9-210ENST00000493082 NFE2L2Q16236 605 aa17.42■□□□□ 0.38
BRD9-210ENST00000493082 AKAP4Q5JQC9 854 aa17.42■□□□□ 0.38
BRD9-210ENST00000493082 TMPOP42166 694 aaKnown RBP17.41■□□□□ 0.38
BRD9-210ENST00000493082 NKX1-1Q15270 411 aaPredicted RBP17.41■□□□□ 0.38
BRD9-210ENST00000493082 PAPPAQ13219 1627 aa17.4■□□□□ 0.38
BRD9-210ENST00000493082 BCL9O00512 1426 aa17.4■□□□□ 0.38
BRD9-210ENST00000493082 TRIM37O94972 964 aa17.4■□□□□ 0.38
BRD9-210ENST00000493082 FAM196AQ6ZSG2 479 aa17.4■□□□□ 0.38
BRD9-210ENST00000493082 THUMPD2Q9BTF0 503 aaKnown RBP17.4■□□□□ 0.38
BRD9-210ENST00000493082 PNNQ9H307 717 aaKnown RBP17.4■□□□□ 0.38
BRD9-210ENST00000493082 MRC1P22897 1456 aa17.39■□□□□ 0.37
BRD9-210ENST00000493082 GNAT3A8MTJ3 354 aa17.39■□□□□ 0.37
BRD9-210ENST00000493082 RNMTO43148 476 aaKnown RBP17.39■□□□□ 0.37
BRD9-210ENST00000493082 NEFMP07197 916 aa17.39■□□□□ 0.37
BRD9-210ENST00000493082 MCM10Q7L590 875 aa17.39■□□□□ 0.37
BRD9-210ENST00000493082 IL17REQ8NFR9 667 aa17.39■□□□□ 0.37
BRD9-210ENST00000493082 LY75O60449 1722 aa17.38■□□□□ 0.37
BRD9-210ENST00000493082 KDM3BQ7LBC6 1761 aa17.38■□□□□ 0.37
BRD9-210ENST00000493082 PRIM1P49642 420 aaKnown RBP17.38■□□□□ 0.37
BRD9-210ENST00000493082 RIPK4P57078 832 aa17.38■□□□□ 0.37
BRD9-210ENST00000493082 SYTL4Q96C24 671 aaPredicted RBP17.38■□□□□ 0.37
BRD9-210ENST00000493082 SALL2Q9Y467 1007 aaPredicted RBP17.38■□□□□ 0.37
BRD9-210ENST00000493082 DCAF5Q96JK2 942 aa17.37■□□□□ 0.37
BRD9-210ENST00000493082 UBR2Q8IWV8 1755 aa17.36■□□□□ 0.37
BRD9-210ENST00000493082 TRIM35Q9UPQ4 493 aa17.36■□□□□ 0.37
BRD9-210ENST00000493082 HSP90AB1P08238 724 aaKnown RBP17.35■□□□□ 0.37
BRD9-210ENST00000493082 CEMIPQ8WUJ3 1361 aa17.35■□□□□ 0.37
BRD9-210ENST00000493082 TAF1LQ8IZX4 1826 aa17.35■□□□□ 0.37
BRD9-210ENST00000493082 RGPD3A6NKT7 1758 aaPredicted RBP17.34■□□□□ 0.37
BRD9-210ENST00000493082 RGPD4Q7Z3J3 1758 aa17.34■□□□□ 0.37
BRD9-210ENST00000493082 RREB1Q92766 1687 aa17.33■□□□□ 0.37
BRD9-210ENST00000493082 PIGBQ92521 554 aa17.33■□□□□ 0.36
BRD9-210ENST00000493082 CABP4P57796 275 aa17.32■□□□□ 0.36
BRD9-210ENST00000493082 NFATC2IPQ8NCF5 419 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms