RNA–Protein interactions for RNA: ENST00000493018.5

RPL35-204, Transcript of ribosomal protein L35, humanhuman

TSL 3

Gene RPL35, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35-204ENST00000493018 WWC1Q8IX03 1113 aa17.67■□□□□ 0.42
RPL35-204ENST00000493018 RTF1Q92541 710 aaKnown RBP17.67■□□□□ 0.42
RPL35-204ENST00000493018 WNK3Q9BYP7 1800 aa17.67■□□□□ 0.42
RPL35-204ENST00000493018 PKD1L3Q7Z443 1732 aa17.67■□□□□ 0.42
RPL35-204ENST00000493018 LRP6O75581 1613 aa17.66■□□□□ 0.42
RPL35-204ENST00000493018 SPG7Q9UQ90 795 aa17.66■□□□□ 0.42
RPL35-204ENST00000493018 HTATSF1O43719 755 aaKnown RBP17.65■□□□□ 0.42
RPL35-204ENST00000493018 MTHFSDQ2M296 383 aaKnown RBP17.65■□□□□ 0.42
RPL35-204ENST00000493018 C1orf141Q5JVX7 400 aa17.65■□□□□ 0.42
RPL35-204ENST00000493018 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.65■□□□□ 0.425e-19■□□□□ 8.3
RPL35-204ENST00000493018 ZNF521Q96K83 1311 aa17.65■□□□□ 0.42
RPL35-204ENST00000493018 VIRMAQ69YN4 1812 aaKnown RBP17.64■□□□□ 0.41
RPL35-204ENST00000493018 PHF23Q9BUL5 403 aaPredicted RBP17.64■□□□□ 0.41
RPL35-204ENST00000493018 THRAP3Q9Y2W1 955 aaKnown RBP17.64■□□□□ 0.41
RPL35-204ENST00000493018 GNAT3A8MTJ3 354 aa17.63■□□□□ 0.41
RPL35-204ENST00000493018 E9PSI1 815 aa17.63■□□□□ 0.41
RPL35-204ENST00000493018 IL2RBP14784 551 aa17.63■□□□□ 0.41
RPL35-204ENST00000493018 UNC5CLQ8IV45 518 aa17.63■□□□□ 0.41
RPL35-204ENST00000493018 FNBP4Q8N3X1 1017 aaPredicted RBP17.63■□□□□ 0.41
RPL35-204ENST00000493018 TRIM35Q9UPQ4 493 aa17.63■□□□□ 0.41
RPL35-204ENST00000493018 IL16Q14005 1332 aa17.63■□□□□ 0.41
RPL35-204ENST00000493018 MAP3K5Q99683 1374 aa17.63■□□□□ 0.41
RPL35-204ENST00000493018 MEGF6O75095 1541 aa17.62■□□□□ 0.41
RPL35-204ENST00000493018 AKAP4Q5JQC9 854 aa17.62■□□□□ 0.41
RPL35-204ENST00000493018 ZNF530Q6P9A1 599 aaPredicted RBP17.62■□□□□ 0.41
RPL35-204ENST00000493018 CDCA7Q9BWT1 371 aaPredicted RBP17.62■□□□□ 0.41
RPL35-204ENST00000493018 OVOS2A0A0G2JMS6 1433 aa17.62■□□□□ 0.41
RPL35-204ENST00000493018 MYH16Q9H6N6 1097 aa17.61■□□□□ 0.41
RPL35-204ENST00000493018 USP35Q9P2H5 1018 aa17.61■□□□□ 0.41
RPL35-204ENST00000493018 USP21Q9UK80 565 aa17.61■□□□□ 0.41
RPL35-204ENST00000493018 CCDC9Q9Y3X0 531 aaKnown RBP17.61■□□□□ 0.41
RPL35-204ENST00000493018 SPATA31A1Q5TZJ5 1347 aa17.59■□□□□ 0.41
RPL35-204ENST00000493018 HSP90AB1P08238 724 aaKnown RBP17.59■□□□□ 0.41
RPL35-204ENST00000493018 BCL9LQ86UU0 1499 aa17.58■□□□□ 0.41
RPL35-204ENST00000493018 SPATA31A5Q5VU36 1347 aa17.58■□□□□ 0.4
RPL35-204ENST00000493018 SPATA31A7Q8IWB4 1347 aa17.58■□□□□ 0.4
RPL35-204ENST00000493018 PCDH11XQ9BZA7 1347 aa17.58■□□□□ 0.4
RPL35-204ENST00000493018 PCDH11YQ9BZA8 1340 aa17.58■□□□□ 0.4
RPL35-204ENST00000493018 SLFN5Q08AF3 891 aa17.58■□□□□ 0.4
RPL35-204ENST00000493018 VPS72Q15906 364 aa17.58■□□□□ 0.4
RPL35-204ENST00000493018 IFNL2Q8IZJ0 200 aa17.58■□□□□ 0.4
RPL35-204ENST00000493018 ZCRB1Q8TBF4 217 aaKnown RBP17.58■□□□□ 0.4
RPL35-204ENST00000493018 LRRC37A3O60309 1634 aa17.58■□□□□ 0.4
RPL35-204ENST00000493018 GNAI1P63096 354 aa17.57■□□□□ 0.4
RPL35-204ENST00000493018 SCN11AQ9UI33 1791 aa17.57■□□□□ 0.4
RPL35-204ENST00000493018 AFF2P51816 1311 aa17.56■□□□□ 0.4
RPL35-204ENST00000493018 CDCA7LQ96GN5 454 aa17.56■□□□□ 0.4
RPL35-204ENST00000493018 IFT57Q9NWB7 429 aa17.56■□□□□ 0.4
RPL35-204ENST00000493018 DISP2A7MBM2 1401 aa17.55■□□□□ 0.4
RPL35-204ENST00000493018 SHANK3Q9BYB0 1731 aa17.55■□□□□ 0.4
RPL35-204ENST00000493018 BARGINQ6ZT62 677 aa17.55■□□□□ 0.4
RPL35-204ENST00000493018 MCM10Q7L590 875 aa17.55■□□□□ 0.4
RPL35-204ENST00000493018 ADAMTS7Q9UKP4 1686 aa17.55■□□□□ 0.4
RPL35-204ENST00000493018 PHKG2P15735 406 aa17.54■□□□□ 0.4
RPL35-204ENST00000493018 TRPC5Q9UL62 973 aaPredicted RBP17.54■□□□□ 0.4
RPL35-204ENST00000493018 LAS1LQ9Y4W2 734 aaKnown RBP17.54■□□□□ 0.4
RPL35-204ENST00000493018 EXOC5O00471 708 aa17.53■□□□□ 0.4
RPL35-204ENST00000493018 TEFQ10587 303 aa17.53■□□□□ 0.4
RPL35-204ENST00000493018 DCTN1Q14203 1278 aa17.53■□□□□ 0.4
RPL35-204ENST00000493018 DUSP27Q5VZP5 1158 aa17.53■□□□□ 0.4
RPL35-204ENST00000493018 TRMT2AQ8IZ69 625 aaKnown RBP17.53■□□□□ 0.4
RPL35-204ENST00000493018 CFAP44Q96MT7 982 aa17.53■□□□□ 0.4
RPL35-204ENST00000493018 DCAF5Q96JK2 942 aa17.52■□□□□ 0.4
RPL35-204ENST00000493018 BABAM1Q9NWV8 329 aa17.52■□□□□ 0.4
RPL35-204ENST00000493018 TNS2Q63HR2 1409 aa17.52■□□□□ 0.4
RPL35-204ENST00000493018 THUMPD2Q9BTF0 503 aaKnown RBP17.51■□□□□ 0.39
RPL35-204ENST00000493018 CEMIPQ8WUJ3 1361 aa17.51■□□□□ 0.39
RPL35-204ENST00000493018 SIPA1L3O60292 1781 aaPredicted RBP17.51■□□□□ 0.39
RPL35-204ENST00000493018 ATRNO75882 1429 aa17.5■□□□□ 0.39
RPL35-204ENST00000493018 RNMTO43148 476 aaKnown RBP17.5■□□□□ 0.39
RPL35-204ENST00000493018 DDB1Q16531 1140 aa17.5■□□□□ 0.39
RPL35-204ENST00000493018 ZNF772Q68DY9 489 aaPredicted RBP17.5■□□□□ 0.39
RPL35-204ENST00000493018 MPRIPQ6WCQ1 1025 aa17.5■□□□□ 0.39
RPL35-204ENST00000493018 IL17REQ8NFR9 667 aa17.5■□□□□ 0.39
RPL35-204ENST00000493018 FANCIQ9NVI1 1328 aa17.49■□□□□ 0.39
RPL35-204ENST00000493018 CYP27B1O15528 508 aa17.49■□□□□ 0.39
RPL35-204ENST00000493018 TAF7Q15545 349 aaPredicted RBP17.49■□□□□ 0.39
RPL35-204ENST00000493018 DDX54Q8TDD1 881 aaKnown RBP17.49■□□□□ 0.39
RPL35-204ENST00000493018 GJD4Q96KN9 370 aaPredicted RBP17.49■□□□□ 0.39
RPL35-204ENST00000493018 SPINK5Q9NQ38 1064 aaPredicted RBP17.49■□□□□ 0.39
RPL35-204ENST00000493018 CT47B1P0C2W7 299 aaPredicted RBP17.48■□□□□ 0.39
RPL35-204ENST00000493018 ZNF853P0CG23 659 aa17.48■□□□□ 0.39
RPL35-204ENST00000493018 TSPYL4Q9UJ04 414 aa17.48■□□□□ 0.39
RPL35-204ENST00000493018 A0A0G2JS52 829 aa17.47■□□□□ 0.39
RPL35-204ENST00000493018 MYT1Q01538 1121 aa17.47■□□□□ 0.39
RPL35-204ENST00000493018 NKX1-1Q15270 411 aaPredicted RBP17.47■□□□□ 0.39
RPL35-204ENST00000493018 FAM98CQ17RN3 349 aaKnown RBP17.47■□□□□ 0.39
RPL35-204ENST00000493018 TSR2Q969E8 191 aaKnown RBP17.47■□□□□ 0.39
RPL35-204ENST00000493018 LGR6Q9HBX8 967 aa17.47■□□□□ 0.39
RPL35-204ENST00000493018 GLI3P10071 1580 aa17.47■□□□□ 0.39
RPL35-204ENST00000493018 KDM3BQ7LBC6 1761 aa17.47■□□□□ 0.39
RPL35-204ENST00000493018 THSD7AQ9UPZ6 1657 aa17.46■□□□□ 0.39
RPL35-204ENST00000493018 MRC1P22897 1456 aa17.46■□□□□ 0.39
RPL35-204ENST00000493018 CHL1O00533 1208 aa17.46■□□□□ 0.39
RPL35-204ENST00000493018 QTRT2Q9H974 415 aaKnown RBP17.46■□□□□ 0.39
RPL35-204ENST00000493018 MBIPQ9NS73 344 aa17.46■□□□□ 0.39
RPL35-204ENST00000493018 KDM6AO15550 1401 aaPredicted RBP17.46■□□□□ 0.39
RPL35-204ENST00000493018 ERVV-2B6SEH9 535 aa17.45■□□□□ 0.38
RPL35-204ENST00000493018 RCAN3Q9UKA8 241 aa17.45■□□□□ 0.38
RPL35-204ENST00000493018 BTBD11A6QL63 1104 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms