RNA–Protein interactions for RNA: ENST00000492878.1

EPHB4-209, Transcript of EPH receptor B4, humanhuman

TSL 5

Gene EPHB4, Length 769 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-209ENST00000492878 HSPA6P17066 643 aa21.81■■□□□ 1.08
EPHB4-209ENST00000492878 IP6K1Q92551 441 aa21.81■■□□□ 1.08
EPHB4-209ENST00000492878 EDC4Q6P2E9 1401 aaKnown RBP21.8■■□□□ 1.08
EPHB4-209ENST00000492878 ROCK2O75116 1388 aaKnown RBP21.8■■□□□ 1.08
EPHB4-209ENST00000492878 CD2APQ9Y5K6 639 aa21.8■■□□□ 1.08
EPHB4-209ENST00000492878 GPBP1L1Q9HC44 474 aaPredicted RBP21.79■■□□□ 1.08
EPHB4-209ENST00000492878 CCNL1Q9UK58 526 aaPredicted RBP21.79■■□□□ 1.08
EPHB4-209ENST00000492878 SYTL4Q96C24 671 aaPredicted RBP21.78■■□□□ 1.08
EPHB4-209ENST00000492878 C5P01031 1676 aa21.75■■□□□ 1.07
EPHB4-209ENST00000492878 MEGF6O75095 1541 aa21.75■■□□□ 1.07
EPHB4-209ENST00000492878 ZCRB1Q8TBF4 217 aaKnown RBP21.74■■□□□ 1.07
EPHB4-209ENST00000492878 A0A1W2PP64 1363 aa21.74■■□□□ 1.07
EPHB4-209ENST00000492878 MSL1Q68DK7 614 aa21.73■■□□□ 1.07
EPHB4-209ENST00000492878 HDGFL2Q7Z4V5 671 aaPredicted RBP21.73■■□□□ 1.07
EPHB4-209ENST00000492878 USP47Q96K76 1375 aa21.73■■□□□ 1.07
EPHB4-209ENST00000492878 RGPD2P0DJD1 1756 aa21.72■■□□□ 1.07
EPHB4-209ENST00000492878 TAF1LQ8IZX4 1826 aa21.72■■□□□ 1.07
EPHB4-209ENST00000492878 MSH5O43196 834 aa21.72■■□□□ 1.07
EPHB4-209ENST00000492878 SLC12A5Q9H2X9 1139 aa21.72■■□□□ 1.07
EPHB4-209ENST00000492878 LTV1Q96GA3 475 aaPredicted RBP21.71■■□□□ 1.07
EPHB4-209ENST00000492878 HOXC9P31274 260 aa21.69■■□□□ 1.06
EPHB4-209ENST00000492878 FLAD1Q8NFF5 587 aa21.69■■□□□ 1.06
EPHB4-209ENST00000492878 MAP3K19Q56UN5 1328 aa21.69■■□□□ 1.06
EPHB4-209ENST00000492878 TMC1Q8TDI8 760 aa21.68■■□□□ 1.06
EPHB4-209ENST00000492878 PUS7Q96PZ0 661 aaKnown RBP21.68■■□□□ 1.06
EPHB4-209ENST00000492878 TERF2IPQ9NYB0 399 aa21.68■■□□□ 1.06
EPHB4-209ENST00000492878 TOGARAM1Q9Y4F4 1720 aa21.68■■□□□ 1.06
EPHB4-209ENST00000492878 CICQ96RK0 1608 aaPredicted RBP21.67■■□□□ 1.06
EPHB4-209ENST00000492878 CGNL1Q0VF96 1302 aa21.67■■□□□ 1.06
EPHB4-209ENST00000492878 KIF3CO14782 793 aa21.67■■□□□ 1.06
EPHB4-209ENST00000492878 HMGB2P26583 209 aaKnown RBP21.67■■□□□ 1.06
EPHB4-209ENST00000492878 ZNF526Q8TF50 670 aaPredicted RBP21.66■■□□□ 1.06
EPHB4-209ENST00000492878 C4BP0C0L5 1744 aa21.65■■□□□ 1.06
EPHB4-209ENST00000492878 RTL1A6NKG5 1358 aa21.64■■□□□ 1.06
EPHB4-209ENST00000492878 SIN3AQ96ST3 1273 aa21.64■■□□□ 1.05
EPHB4-209ENST00000492878 UBR3Q6ZT12 1888 aa21.64■■□□□ 1.05
EPHB4-209ENST00000492878 PALLDQ8WX93 1383 aa21.63■■□□□ 1.05
EPHB4-209ENST00000492878 IGSF1Q8N6C5 1336 aa21.63■■□□□ 1.05
EPHB4-209ENST00000492878 NBPF6Q5VWK0 638 aa21.63■■□□□ 1.05
EPHB4-209ENST00000492878 AMIGO3Q86WK7 504 aa21.63■■□□□ 1.05
EPHB4-209ENST00000492878 NBPF4Q96M43 638 aa21.63■■□□□ 1.05
EPHB4-209ENST00000492878 FBLN1P23142 703 aa21.61■■□□□ 1.05
EPHB4-209ENST00000492878 DNAJC5GQ8N7S2 189 aa21.61■■□□□ 1.05
EPHB4-209ENST00000492878 AMPHP49418 695 aa21.6■■□□□ 1.05
EPHB4-209ENST00000492878 APLP1P51693 650 aa21.6■■□□□ 1.05
EPHB4-209ENST00000492878 COG3Q96JB2 828 aa21.6■■□□□ 1.05
EPHB4-209ENST00000492878 PCDH11XQ9BZA7 1347 aa21.57■■□□□ 1.04
EPHB4-209ENST00000492878 PCDH11YQ9BZA8 1340 aa21.57■■□□□ 1.04
EPHB4-209ENST00000492878 MAP2P11137 1827 aaKnown RBP21.57■■□□□ 1.04
EPHB4-209ENST00000492878 ITGB4P16144 1822 aa21.57■■□□□ 1.04
EPHB4-209ENST00000492878 NSD3Q9BZ95 1437 aa21.57■■□□□ 1.04
EPHB4-209ENST00000492878 CARD11Q9BXL7 1154 aa21.57■■□□□ 1.04
EPHB4-209ENST00000492878 KIAA1551Q9HCM1 1747 aa21.56■■□□□ 1.04
EPHB4-209ENST00000492878 USHBP1Q8N6Y0 703 aa21.56■■□□□ 1.04
EPHB4-209ENST00000492878 RAPGEF4Q8WZA2 1011 aa21.56■■□□□ 1.04
EPHB4-209ENST00000492878 KIF13BQ9NQT8 1826 aa21.55■■□□□ 1.04
EPHB4-209ENST00000492878 AK7Q96M32 723 aa21.55■■□□□ 1.04
EPHB4-209ENST00000492878 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.54■■□□□ 1.04
EPHB4-209ENST00000492878 CYP27B1O15528 508 aa21.54■■□□□ 1.04
EPHB4-209ENST00000492878 SSFA2P28290 1259 aa21.54■■□□□ 1.04
EPHB4-209ENST00000492878 MPRIPQ6WCQ1 1025 aa21.54■■□□□ 1.04
EPHB4-209ENST00000492878 SMARCC1Q92922 1105 aaPredicted RBP21.54■■□□□ 1.04
EPHB4-209ENST00000492878 PKD1L3Q7Z443 1732 aa21.53■■□□□ 1.04
EPHB4-209ENST00000492878 TOMM70O94826 608 aa21.53■■□□□ 1.04
EPHB4-209ENST00000492878 TATP17735 454 aaPredicted RBP21.53■■□□□ 1.04
EPHB4-209ENST00000492878 WWC3Q9ULE0 1092 aa21.53■■□□□ 1.04
EPHB4-209ENST00000492878 SMG6Q86US8 1419 aaKnown RBP21.53■■□□□ 1.04
EPHB4-209ENST00000492878 NEUROD1Q13562 356 aa21.52■■□□□ 1.04
EPHB4-209ENST00000492878 RRS1Q15050 365 aaKnown RBP21.52■■□□□ 1.04
EPHB4-209ENST00000492878 SMIM5Q71RC9 77 aa21.52■■□□□ 1.04
EPHB4-209ENST00000492878 PXDNLA1KZ92 1463 aa21.52■■□□□ 1.03
EPHB4-209ENST00000492878 INSRP06213 1382 aa21.51■■□□□ 1.03
EPHB4-209ENST00000492878 TESK2Q96S53 571 aa21.51■■□□□ 1.03
EPHB4-209ENST00000492878 PHF14O94880 888 aa21.5■■□□□ 1.03
EPHB4-209ENST00000492878 TRIM26Q12899 539 aaPredicted RBP21.5■■□□□ 1.03
EPHB4-209ENST00000492878 PIGBQ92521 554 aa21.5■■□□□ 1.03
EPHB4-209ENST00000492878 WDR90Q96KV7 1748 aa21.49■■□□□ 1.03
EPHB4-209ENST00000492878 NCAPD2Q15021 1401 aa21.49■■□□□ 1.03
EPHB4-209ENST00000492878 NKX1-1Q15270 411 aaPredicted RBP21.49■■□□□ 1.03
EPHB4-209ENST00000492878 LINC00116Q8NCU8 138 aa21.49■■□□□ 1.03
EPHB4-209ENST00000492878 KIF24Q5T7B8 1368 aa21.48■■□□□ 1.03
EPHB4-209ENST00000492878 FYB1O15117 783 aa21.48■■□□□ 1.03
EPHB4-209ENST00000492878 HSP90AB2PQ58FF8 381 aa21.47■■□□□ 1.03
EPHB4-209ENST00000492878 PCNTO95613 3336 aa21.47■■□□□ 1.03
EPHB4-209ENST00000492878 LOC102724428A0A0B4J2F2 783 aa21.46■■□□□ 1.03
EPHB4-209ENST00000492878 SIK1P57059 783 aa21.46■■□□□ 1.03
EPHB4-209ENST00000492878 FLT4P35916 1363 aa21.46■■□□□ 1.03
EPHB4-209ENST00000492878 N4BP2Q86UW6 1770 aaPredicted RBP21.46■■□□□ 1.03
EPHB4-209ENST00000492878 TGFB2P61812 414 aa21.45■■□□□ 1.02
EPHB4-209ENST00000492878 JMYQ8N9B5 988 aa21.45■■□□□ 1.02
EPHB4-209ENST00000492878 C10orf71Q711Q0 1435 aa21.45■■□□□ 1.02
EPHB4-209ENST00000492878 BRCA1P38398 1863 aaKnown RBP21.44■■□□□ 1.02
EPHB4-209ENST00000492878 RBM46Q8TBY0 533 aaKnown RBP21.44■■□□□ 1.02
EPHB4-209ENST00000492878 NMRK2Q9NPI5 230 aa21.44■■□□□ 1.02
EPHB4-209ENST00000492878 MMP10P09238 476 aa21.43■■□□□ 1.02
EPHB4-209ENST00000492878 ITPK1Q13572 414 aa21.43■■□□□ 1.02
EPHB4-209ENST00000492878 GGNBP2Q9H3C7 697 aa21.43■■□□□ 1.02
EPHB4-209ENST00000492878 GNPATO15228 680 aa21.42■■□□□ 1.02
EPHB4-209ENST00000492878 KLRG1Q96E93 195 aa21.41■■□□□ 1.02
EPHB4-209ENST00000492878 COL13A1Q5TAT6 717 aaPredicted RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms