RNA–Protein interactions for RNA: ENST00000492536.5

RUSC1-215, Transcript of RUN and SH3 domain containing 1, human

TSL 3

Gene RUSC1, Length 1,069 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUSC1-215	ENST00000492536	RAPGEF4	Q8WZA2	1011 aa		32.67	■■■□□ 2.82
RUSC1-215	ENST00000492536	KAT6B	Q8WYB5	2073 aa		32.66	■■■□□ 2.82
RUSC1-215	ENST00000492536	SHANK3	Q9BYB0	1731 aa		32.64	■■■□□ 2.82
RUSC1-215	ENST00000492536	USHBP1	Q8N6Y0	703 aa		32.63	■■■□□ 2.81
RUSC1-215	ENST00000492536	PAPPA	Q13219	1627 aa		32.62	■■■□□ 2.81
RUSC1-215	ENST00000492536	POLR3GL	Q9BT43	218 aa		32.62	■■■□□ 2.81
RUSC1-215	ENST00000492536	EMILIN1	Q9Y6C2	1016 aa		32.62	■■■□□ 2.81
RUSC1-215	ENST00000492536	HSPA5	P11021	654 aa	Known RBP	32.61	■■■□□ 2.81
RUSC1-215	ENST00000492536	TAT	P17735	454 aa	Predicted RBP	32.61	■■■□□ 2.81
RUSC1-215	ENST00000492536	SLC27A3	Q5K4L6	730 aa		32.61	■■■□□ 2.81
RUSC1-215	ENST00000492536	PDGFD	Q9GZP0	370 aa	Predicted RBP	32.61	■■■□□ 2.81
RUSC1-215	ENST00000492536	PRIM1	P49642	420 aa	Known RBP	32.6	■■■□□ 2.81
RUSC1-215	ENST00000492536	SYTL4	Q96C24	671 aa	Predicted RBP	32.6	■■■□□ 2.81
RUSC1-215	ENST00000492536	DOT1L	Q8TEK3	1739 aa		32.6	■■■□□ 2.81
RUSC1-215	ENST00000492536	ANKRD26	Q9UPS8	1709 aa		32.59	■■■□□ 2.81
RUSC1-215	ENST00000492536	ZBTB7A	O95365	584 aa		32.58	■■■□□ 2.81
RUSC1-215	ENST00000492536	LRRC4B	Q9NT99	713 aa		32.57	■■■□□ 2.8
RUSC1-215	ENST00000492536	WASHC2A	Q641Q2	1341 aa		32.56	■■■□□ 2.8
RUSC1-215	ENST00000492536	PCDH11X	Q9BZA7	1347 aa		32.56	■■■□□ 2.8
RUSC1-215	ENST00000492536	PCDH11Y	Q9BZA8	1340 aa		32.56	■■■□□ 2.8
RUSC1-215	ENST00000492536	NSD2	O96028	1365 aa		32.56	■■■□□ 2.8
RUSC1-215	ENST00000492536	PPM1G	O15355	546 aa	Predicted RBP	32.55	■■■□□ 2.8
RUSC1-215	ENST00000492536	MTFR1L	Q9H019	292 aa		32.55	■■■□□ 2.8
RUSC1-215	ENST00000492536	NCAPD2	Q15021	1401 aa		32.54	■■■□□ 2.8
RUSC1-215	ENST00000492536	PTGER2	P43116	358 aa		32.52	■■■□□ 2.8
RUSC1-215	ENST00000492536	ZNF827	Q17R98	1081 aa		32.51	■■■□□ 2.79
RUSC1-215	ENST00000492536	ATF5	Q9Y2D1	282 aa	Predicted RBP	32.51	■■■□□ 2.79
RUSC1-215	ENST00000492536	POLK	Q9UBT6	870 aa		32.5	■■■□□ 2.79
RUSC1-215	ENST00000492536	MAP2	P11137	1827 aa	Known RBP	32.49	■■■□□ 2.79
RUSC1-215	ENST00000492536	LY75	O60449	1722 aa		32.48	■■■□□ 2.79
RUSC1-215	ENST00000492536	AKT1S1	Q96B36	256 aa		32.48	■■■□□ 2.79
RUSC1-215	ENST00000492536	PANK3	Q9H999	370 aa		32.48	■■■□□ 2.79
RUSC1-215	ENST00000492536	DCAF8L1	A6NGE4	600 aa		32.46	■■■□□ 2.79
RUSC1-215	ENST00000492536	PKD1L3	Q7Z443	1732 aa		32.45	■■■□□ 2.78
RUSC1-215	ENST00000492536	CYP27B1	O15528	508 aa		32.44	■■■□□ 2.78
RUSC1-215	ENST00000492536	EYA1	Q99502	592 aa		32.44	■■■□□ 2.78
RUSC1-215	ENST00000492536	SGIP1	Q9BQI5	828 aa		32.44	■■■□□ 2.78
RUSC1-215	ENST00000492536	QSER1	Q2KHR3	1735 aa		32.43	■■■□□ 2.78
RUSC1-215	ENST00000492536	CCNL1	Q9UK58	526 aa	Predicted RBP	32.43	■■■□□ 2.78
RUSC1-215	ENST00000492536	SPG7	Q9UQ90	795 aa		32.43	■■■□□ 2.78
RUSC1-215	ENST00000492536	HMGB2	P26583	209 aa	Known RBP	32.42	■■■□□ 2.78
RUSC1-215	ENST00000492536	TNNT2	P45379	298 aa	Predicted RBP	32.42	■■■□□ 2.78
RUSC1-215	ENST00000492536	SLC16A10	Q8TF71	515 aa		32.42	■■■□□ 2.78
RUSC1-215	ENST00000492536	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	32.41	■■■□□ 2.78
RUSC1-215	ENST00000492536	TFCP2L1	Q9NZI6	479 aa		32.4	■■■□□ 2.78
RUSC1-215	ENST00000492536	PLEKHG2	Q9H7P9	1386 aa		32.4	■■■□□ 2.78
RUSC1-215	ENST00000492536	KCNQ4	P56696	695 aa		32.39	■■■□□ 2.78
RUSC1-215	ENST00000492536	EIF4A2	Q14240	407 aa	Known RBP	32.38	■■■□□ 2.77
RUSC1-215	ENST00000492536	NKX1-1	Q15270	411 aa	Predicted RBP	32.38	■■■□□ 2.77
RUSC1-215	ENST00000492536	PNPLA7	Q6ZV29	1317 aa		32.37	■■■□□ 2.77
RUSC1-215	ENST00000492536	MPRIP	Q6WCQ1	1025 aa		32.35	■■■□□ 2.77
RUSC1-215	ENST00000492536	ARX	Q96QS3	562 aa		32.35	■■■□□ 2.77
RUSC1-215	ENST00000492536	FHDC1	Q9C0D6	1143 aa	Predicted RBP	32.35	■■■□□ 2.77
RUSC1-215	ENST00000492536	PALLD	Q8WX93	1383 aa		32.34	■■■□□ 2.77
RUSC1-215	ENST00000492536	SMARCC1	Q92922	1105 aa	Predicted RBP	32.33	■■■□□ 2.77
RUSC1-215	ENST00000492536	SYT17	Q9BSW7	474 aa		32.33	■■■□□ 2.77
RUSC1-215	ENST00000492536	KNSTRN	Q9Y448	316 aa		32.33	■■■□□ 2.77
RUSC1-215	ENST00000492536	TOGARAM1	Q9Y4F4	1720 aa		32.33	■■■□□ 2.77
RUSC1-215	ENST00000492536	MORC1	Q86VD1	984 aa		32.32	■■■□□ 2.76
RUSC1-215	ENST00000492536	MAP3K5	Q99683	1374 aa		32.32	■■■□□ 2.76
RUSC1-215	ENST00000492536	IGSF1	Q8N6C5	1336 aa		32.31	■■■□□ 2.76
RUSC1-215	ENST00000492536	TUBGCP6	Q96RT7	1819 aa		32.3	■■■□□ 2.76
RUSC1-215	ENST00000492536	IFNL2	Q8IZJ0	200 aa		32.3	■■■□□ 2.76
RUSC1-215	ENST00000492536	ITGB4	P16144	1822 aa		32.29	■■■□□ 2.76
RUSC1-215	ENST00000492536	POLD1	P28340	1107 aa		32.29	■■■□□ 2.76
RUSC1-215	ENST00000492536	C5	P01031	1676 aa		32.27	■■■□□ 2.76
RUSC1-215	ENST00000492536	PHKG2	P15735	406 aa		32.27	■■■□□ 2.76
RUSC1-215	ENST00000492536	PIGB	Q92521	554 aa		32.27	■■■□□ 2.76
RUSC1-215	ENST00000492536	KIF7	Q2M1P5	1343 aa		32.26	■■■□□ 2.76
RUSC1-215	ENST00000492536	COL24A1	Q17RW2	1714 aa		32.26	■■■□□ 2.76
RUSC1-215	ENST00000492536	YY1	P25490	414 aa		32.26	■■■□□ 2.75
RUSC1-215	ENST00000492536	TMOD3	Q9NYL9	352 aa		32.24	■■■□□ 2.75
RUSC1-215	ENST00000492536	AMER1	Q5JTC6	1135 aa	Predicted RBP	32.22	■■■□□ 2.75
RUSC1-215	ENST00000492536	FLAD1	Q8NFF5	587 aa		32.22	■■■□□ 2.75
RUSC1-215	ENST00000492536	COL23A1	Q86Y22	540 aa	Predicted RBP	32.21	■■■□□ 2.75
RUSC1-215	ENST00000492536	TAF1L	Q8IZX4	1826 aa		32.21	■■■□□ 2.75
RUSC1-215	ENST00000492536	MSH5	O43196	834 aa		32.19	■■■□□ 2.74
RUSC1-215	ENST00000492536	HSP90AB1	P08238	724 aa	Known RBP	32.19	■■■□□ 2.74
RUSC1-215	ENST00000492536	AMOT	Q4VCS5	1084 aa		32.18	■■■□□ 2.74
RUSC1-215	ENST00000492536	PLEKHO1	Q53GL0	409 aa	Predicted RBP	32.18	■■■□□ 2.74
RUSC1-215	ENST00000492536	C4B	P0C0L5	1744 aa		32.17	■■■□□ 2.74
RUSC1-215	ENST00000492536	LOC102724428	A0A0B4J2F2	783 aa		32.16	■■■□□ 2.74
RUSC1-215	ENST00000492536	SIK1	P57059	783 aa		32.16	■■■□□ 2.74
RUSC1-215	ENST00000492536	AK7	Q96M32	723 aa		32.16	■■■□□ 2.74
RUSC1-215	ENST00000492536	UTRN	P46939	3433 aa		32.15	■■■□□ 2.74
RUSC1-215	ENST00000492536	ERVV-2	B6SEH9	535 aa		32.14	■■■□□ 2.74
RUSC1-215	ENST00000492536	DCAF5	Q96JK2	942 aa		32.14	■■■□□ 2.74
RUSC1-215	ENST00000492536	ASAP1	Q9ULH1	1129 aa		32.13	■■■□□ 2.73
RUSC1-215	ENST00000492536	KDR	P35968	1356 aa		32.12	■■■□□ 2.73
RUSC1-215	ENST00000492536	PER1	O15534	1290 aa	Predicted RBP	32.11	■■■□□ 2.73
RUSC1-215	ENST00000492536	IL13	P35225	146 aa		32.11	■■■□□ 2.73
RUSC1-215	ENST00000492536	ZNF530	Q6P9A1	599 aa	Predicted RBP	32.11	■■■□□ 2.73
RUSC1-215	ENST00000492536	KLHL34	Q8N239	644 aa		32.11	■■■□□ 2.73
RUSC1-215	ENST00000492536	AEBP1	Q8IUX7	1158 aa		32.1	■■■□□ 2.73
RUSC1-215	ENST00000492536	ATG3	Q9NT62	314 aa		32.1	■■■□□ 2.73
RUSC1-215	ENST00000492536	SULT6B1	Q6IMI4	303 aa		32.09	■■■□□ 2.73
RUSC1-215	ENST00000492536	SSFA2	P28290	1259 aa		32.07	■■■□□ 2.72
RUSC1-215	ENST00000492536	C1orf141	Q5JVX7	400 aa		32.07	■■■□□ 2.72
RUSC1-215	ENST00000492536	LINC00116	Q8NCU8	138 aa		32.07	■■■□□ 2.72
RUSC1-215	ENST00000492536	UBR3	Q6ZT12	1888 aa		32.06	■■■□□ 2.72

Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms