RNA–Protein interactions for RNA: ENST00000492468.5

PABPC4-216, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 2,257 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-216ENST00000492468 PTPRMP28827 1452 aa18.07■□□□□ 0.48
PABPC4-216ENST00000492468 SRPK2P78362 688 aaKnown RBP18.07■□□□□ 0.48
PABPC4-216ENST00000492468 TWISTNBQ3B726 338 aaPredicted RBP18.07■□□□□ 0.48
PABPC4-216ENST00000492468 DMTNQ08495 405 aa18.07■□□□□ 0.48
PABPC4-216ENST00000492468 PHACTR3Q96KR7 559 aa18.07■□□□□ 0.48
PABPC4-216ENST00000492468 ARID3AQ99856 593 aa18.07■□□□□ 0.48
PABPC4-216ENST00000492468 ARHGEF40Q8TER5 1519 aa18.07■□□□□ 0.48
PABPC4-216ENST00000492468 PTMAP06454 111 aaKnown RBP18.06■□□□□ 0.48
PABPC4-216ENST00000492468 GTF2F1P35269 517 aaKnown RBP eCLIP18.06■□□□□ 0.48
PABPC4-216ENST00000492468 PRIMPOLQ96LW4 560 aa18.06■□□□□ 0.48
PABPC4-216ENST00000492468 SAFB2Q14151 953 aaKnown RBP eCLIP18.06■□□□□ 0.48
PABPC4-216ENST00000492468 RGS12O14924 1447 aa18.05■□□□□ 0.48
PABPC4-216ENST00000492468 ELL2O00472 640 aaPredicted RBP18.05■□□□□ 0.48
PABPC4-216ENST00000492468 ERC2O15083 957 aa18.05■□□□□ 0.48
PABPC4-216ENST00000492468 VGFO15240 615 aaPredicted RBP18.05■□□□□ 0.48
PABPC4-216ENST00000492468 TMX3Q96JJ7 454 aa18.05■□□□□ 0.48
PABPC4-216ENST00000492468 TUBGCP6Q96RT7 1819 aa18.05■□□□□ 0.48
PABPC4-216ENST00000492468 CUL4AQ13619 759 aa18.05■□□□□ 0.48
PABPC4-216ENST00000492468 ZNF710Q8N1W2 664 aa18.05■□□□□ 0.48
PABPC4-216ENST00000492468 C8orf58Q8NAV2 365 aa18.05■□□□□ 0.48
PABPC4-216ENST00000492468 PIBF1Q8WXW3 757 aa18.05■□□□□ 0.48
PABPC4-216ENST00000492468 SYAP1Q96A49 352 aaPredicted RBP18.05■□□□□ 0.48
PABPC4-216ENST00000492468 PRDM10Q9NQV6 1147 aa18.05■□□□□ 0.48
PABPC4-216ENST00000492468 MAP2P11137 1827 aaKnown RBP18.04■□□□□ 0.48
PABPC4-216ENST00000492468 HMGN5P82970 282 aaKnown RBP18.04■□□□□ 0.48
PABPC4-216ENST00000492468 ZSCAN20P17040 1043 aaPredicted RBP18.03■□□□□ 0.48
PABPC4-216ENST00000492468 RPAP2Q8IXW5 612 aaPredicted RBP18.03■□□□□ 0.48
PABPC4-216ENST00000492468 MCM2P49736 904 aa18.03■□□□□ 0.48
PABPC4-216ENST00000492468 FOXD4L5Q5VV16 416 aaPredicted RBP18.03■□□□□ 0.48
PABPC4-216ENST00000492468 CEP85Q6P2H3 762 aa18.03■□□□□ 0.48
PABPC4-216ENST00000492468 FOXD4L4Q8WXT5 416 aaPredicted RBP18.03■□□□□ 0.48
PABPC4-216ENST00000492468 UVSSAQ2YD98 709 aa18.02■□□□□ 0.48
PABPC4-216ENST00000492468 PODXL2Q9NZ53 605 aa18.02■□□□□ 0.48
PABPC4-216ENST00000492468 FAM184AQ8NB25 1140 aa18.02■□□□□ 0.47
PABPC4-216ENST00000492468 POLKQ9UBT6 870 aa18.02■□□□□ 0.47
PABPC4-216ENST00000492468 CPSF1Q10570 1443 aaKnown RBP18.02■□□□□ 0.47
PABPC4-216ENST00000492468 RIMS2Q9UQ26 1411 aa18.02■□□□□ 0.47
PABPC4-216ENST00000492468 PHF14O94880 888 aa18.01■□□□□ 0.47
PABPC4-216ENST00000492468 NUTM2DQ5VT03 806 aaPredicted RBP18.01■□□□□ 0.47
PABPC4-216ENST00000492468 RTL1A6NKG5 1358 aa18.01■□□□□ 0.47
PABPC4-216ENST00000492468 SMARCA5O60264 1052 aaPredicted RBP18.01■□□□□ 0.47
PABPC4-216ENST00000492468 HDGFL2Q7Z4V5 671 aaPredicted RBP18.01■□□□□ 0.47
PABPC4-216ENST00000492468 INTS4Q96HW7 963 aaKnown RBP18.01■□□□□ 0.47
PABPC4-216ENST00000492468 YTHDC2Q9H6S0 1430 aaKnown RBP18■□□□□ 0.47
PABPC4-216ENST00000492468 HMOX1P09601 288 aa18■□□□□ 0.47
PABPC4-216ENST00000492468 NEK4P51957 841 aa18■□□□□ 0.47
PABPC4-216ENST00000492468 NOLC1Q14978 699 aaKnown RBP eCLIP18■□□□□ 0.473e-7■□□□□ 9.3
PABPC4-216ENST00000492468 DNTTIP2Q5QJE6 756 aaKnown RBP18■□□□□ 0.47
PABPC4-216ENST00000492468 JARID2Q92833 1246 aaPredicted RBP18■□□□□ 0.47
PABPC4-216ENST00000492468 SPTLC3Q9NUV7 552 aa18■□□□□ 0.47
PABPC4-216ENST00000492468 MSH6P52701 1360 aa17.99■□□□□ 0.47
PABPC4-216ENST00000492468 OSBPL3Q9H4L5 887 aa17.99■□□□□ 0.47
PABPC4-216ENST00000492468 ZHX1Q9UKY1 873 aaPredicted RBP17.99■□□□□ 0.47
PABPC4-216ENST00000492468 MINK1Q8N4C8 1332 aaPredicted RBP17.98■□□□□ 0.47
PABPC4-216ENST00000492468 LMOD3Q0VAK6 560 aa17.98■□□□□ 0.47
PABPC4-216ENST00000492468 FKBP5Q13451 457 aaPredicted RBP17.98■□□□□ 0.47
PABPC4-216ENST00000492468 CDK12Q9NYV4 1490 aaPredicted RBP17.98■□□□□ 0.47
PABPC4-216ENST00000492468 TCHHQ07283 1943 aa17.98■□□□□ 0.47
PABPC4-216ENST00000492468 TSC1Q92574 1164 aa17.97■□□□□ 0.47
PABPC4-216ENST00000492468 GADD45BO75293 160 aaPredicted RBP17.97■□□□□ 0.47
PABPC4-216ENST00000492468 STK26Q9P289 416 aa17.97■□□□□ 0.47
PABPC4-216ENST00000492468 IL13P35225 146 aa17.96■□□□□ 0.47
PABPC4-216ENST00000492468 IL17RAQ96F46 866 aa17.96■□□□□ 0.47
PABPC4-216ENST00000492468 MYO5BQ9ULV0 1848 aa17.96■□□□□ 0.47
PABPC4-216ENST00000492468 TMEM87AQ8NBN3 555 aa17.96■□□□□ 0.47
PABPC4-216ENST00000492468 ZNF830Q96NB3 372 aaPredicted RBP17.96■□□□□ 0.47
PABPC4-216ENST00000492468 USP25Q9UHP3 1055 aa17.96■□□□□ 0.47
PABPC4-216ENST00000492468 ANAPC15P60006 121 aa17.95■□□□□ 0.46
PABPC4-216ENST00000492468 GTPBP4Q9BZE4 634 aaKnown RBP17.95■□□□□ 0.46
PABPC4-216ENST00000492468 ATP7BP35670 1465 aa17.95■□□□□ 0.46
PABPC4-216ENST00000492468 FBLN1P23142 703 aa17.95■□□□□ 0.46
PABPC4-216ENST00000492468 PDE1AP54750 535 aa17.95■□□□□ 0.46
PABPC4-216ENST00000492468 KIF3AQ9Y496 699 aa17.95■□□□□ 0.46
PABPC4-216ENST00000492468 APBB1O00213 710 aa17.94■□□□□ 0.46
PABPC4-216ENST00000492468 USP48Q86UV5 1035 aa17.94■□□□□ 0.46
PABPC4-216ENST00000492468 PRAM1Q96QH2 718 aa17.94■□□□□ 0.46
PABPC4-216ENST00000492468 ESYT1Q9BSJ8 1104 aa17.94■□□□□ 0.46
PABPC4-216ENST00000492468 TTC12Q9H892 705 aaPredicted RBP17.94■□□□□ 0.46
PABPC4-216ENST00000492468 PALD1Q9ULE6 856 aa17.94■□□□□ 0.46
PABPC4-216ENST00000492468 MLH3Q9UHC1 1453 aa17.93■□□□□ 0.46
PABPC4-216ENST00000492468 RPAP1Q9BWH6 1393 aaPredicted RBP17.93■□□□□ 0.46
PABPC4-216ENST00000492468 ADCY5O95622 1261 aa17.93■□□□□ 0.46
PABPC4-216ENST00000492468 GGT6Q6P531 493 aa17.93■□□□□ 0.46
PABPC4-216ENST00000492468 SSH2Q76I76 1423 aa17.93■□□□□ 0.46
PABPC4-216ENST00000492468 CCDC183Q5T5S1 534 aa17.93■□□□□ 0.46
PABPC4-216ENST00000492468 MEIS3Q99687 375 aa17.93■□□□□ 0.46
PABPC4-216ENST00000492468 GDPD2Q9HCC8 539 aa17.93■□□□□ 0.46
PABPC4-216ENST00000492468 CABP1Q9NZU7 370 aa17.93■□□□□ 0.46
PABPC4-216ENST00000492468 POGZQ7Z3K3 1410 aa17.93■□□□□ 0.46
PABPC4-216ENST00000492468 ZBTB7CA1YPR0 619 aa17.92■□□□□ 0.46
PABPC4-216ENST00000492468 ATP2B3Q16720 1220 aa17.92■□□□□ 0.46
PABPC4-216ENST00000492468 C17orf53Q8N3J3 647 aaPredicted RBP17.92■□□□□ 0.46
PABPC4-216ENST00000492468 BCL2L12Q9HB09 334 aa17.92■□□□□ 0.46
PABPC4-216ENST00000492468 SALL3Q9BXA9 1300 aa17.92■□□□□ 0.46
PABPC4-216ENST00000492468 WDR33Q9C0J8 1336 aaKnown RBP17.92■□□□□ 0.46
PABPC4-216ENST00000492468 KIAA0232Q92628 1395 aa17.92■□□□□ 0.46
PABPC4-216ENST00000492468 MCCP23508 829 aa17.92■□□□□ 0.46
PABPC4-216ENST00000492468 KRT24Q2M2I5 525 aa17.92■□□□□ 0.46
PABPC4-216ENST00000492468 MPNDQ8N594 471 aa17.92■□□□□ 0.46
PABPC4-216ENST00000492468 PTPRCP08575 1304 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms